RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 MCM5P33992 734 aa20.31■□□□□ 0.84
PTPRU-206ENST00000465525 SHMT1P34896 483 aa20.31■□□□□ 0.84
PTPRU-206ENST00000465525 Q6ZUG5 572 aa20.31■□□□□ 0.84
PTPRU-206ENST00000465525 GLIS2Q9BZE0 524 aaPredicted RBP20.31■□□□□ 0.84
PTPRU-206ENST00000465525 ST18O60284 1047 aa20.3■□□□□ 0.84
PTPRU-206ENST00000465525 NMT2O60551 498 aa20.3■□□□□ 0.84
PTPRU-206ENST00000465525 PCP11498 1178 aaKnown RBP20.3■□□□□ 0.84
PTPRU-206ENST00000465525 NBPF12Q5TAG4 269 aaPredicted RBP20.3■□□□□ 0.84
PTPRU-206ENST00000465525 FOXP4Q8IVH2 680 aaPredicted RBP20.3■□□□□ 0.84
PTPRU-206ENST00000465525 ZNF444Q8N0Y2 327 aaPredicted RBP20.3■□□□□ 0.84
PTPRU-206ENST00000465525 HOOK2Q96ED9 719 aa20.3■□□□□ 0.84
PTPRU-206ENST00000465525 TSPY2A6NKD2 308 aa20.29■□□□□ 0.84
PTPRU-206ENST00000465525 FGD1P98174 961 aa20.29■□□□□ 0.84
PTPRU-206ENST00000465525 TFAP4Q01664 338 aa20.29■□□□□ 0.84
PTPRU-206ENST00000465525 SHROOM1Q2M3G4 852 aaPredicted RBP20.29■□□□□ 0.84
PTPRU-206ENST00000465525 SUPT20HL1Q3ZLR7 823 aa20.29■□□□□ 0.84
PTPRU-206ENST00000465525 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.29■□□□□ 0.84
PTPRU-206ENST00000465525 SWAP70Q9UH65 585 aa20.29■□□□□ 0.84
PTPRU-206ENST00000465525 TOB2Q14106 344 aaPredicted RBP20.29■□□□□ 0.84
PTPRU-206ENST00000465525 ZNF287Q9HBT7 754 aa20.29■□□□□ 0.84
PTPRU-206ENST00000465525 TOMM70O94826 608 aa20.28■□□□□ 0.84
PTPRU-206ENST00000465525 TSPY3P0CV98 308 aa20.28■□□□□ 0.84
PTPRU-206ENST00000465525 TSPY8P0CW00 308 aa20.28■□□□□ 0.84
PTPRU-206ENST00000465525 AKR1B1P15121 316 aa20.28■□□□□ 0.84
PTPRU-206ENST00000465525 RRP1BQ14684 758 aaKnown RBP20.28■□□□□ 0.84
PTPRU-206ENST00000465525 SENP2Q9HC62 589 aa20.28■□□□□ 0.84
PTPRU-206ENST00000465525 TAOK2Q9UL54 1235 aa20.28■□□□□ 0.84
PTPRU-206ENST00000465525 FZD1Q9UP38 647 aa20.28■□□□□ 0.84
PTPRU-206ENST00000465525 IFIT3O14879 490 aaKnown RBP20.27■□□□□ 0.84
PTPRU-206ENST00000465525 METTL16Q86W50 562 aaKnown RBP20.27■□□□□ 0.84
PTPRU-206ENST00000465525 BRF1Q92994 677 aa20.27■□□□□ 0.84
PTPRU-206ENST00000465525 CDCA5Q96FF9 252 aa20.27■□□□□ 0.84
PTPRU-206ENST00000465525 TBC1D2Q9BYX2 928 aa20.27■□□□□ 0.84
PTPRU-206ENST00000465525 MPHOSPH10O00566 681 aaKnown RBP20.26■□□□□ 0.83
PTPRU-206ENST00000465525 TBC1D12O60347 775 aa20.26■□□□□ 0.83
PTPRU-206ENST00000465525 GDF11O95390 407 aa20.26■□□□□ 0.83
PTPRU-206ENST00000465525 TMEM67Q5HYA8 995 aa20.26■□□□□ 0.83
PTPRU-206ENST00000465525 SMC1BQ8NDV3 1235 aa20.26■□□□□ 0.83
PTPRU-206ENST00000465525 RBM46Q8TBY0 533 aaKnown RBP20.26■□□□□ 0.83
PTPRU-206ENST00000465525 UBAC1Q9BSL1 405 aa20.26■□□□□ 0.83
PTPRU-206ENST00000465525 HERC5Q9UII4 1024 aaKnown RBP20.26■□□□□ 0.83
PTPRU-206ENST00000465525 ATAD5Q96QE3 1844 aa20.26■□□□□ 0.83
PTPRU-206ENST00000465525 SSC5DA1L4H1 1573 aa20.26■□□□□ 0.83
PTPRU-206ENST00000465525 SH2B2O14492 632 aaPredicted RBP20.26■□□□□ 0.83
PTPRU-206ENST00000465525 ITGBL1O95965 494 aaPredicted RBP20.26■□□□□ 0.83
PTPRU-206ENST00000465525 NF2P35240 595 aa20.26■□□□□ 0.83
PTPRU-206ENST00000465525 SLC4A3P48751 1232 aa20.26■□□□□ 0.83
PTPRU-206ENST00000465525 MAP3K10Q02779 954 aa20.26■□□□□ 0.83
PTPRU-206ENST00000465525 APOBRQ0VD83 1088 aa20.26■□□□□ 0.83
PTPRU-206ENST00000465525 CERKLQ49MI3 558 aaPredicted RBP20.26■□□□□ 0.83
PTPRU-206ENST00000465525 CLEC10AQ8IUN9 316 aa20.26■□□□□ 0.83
PTPRU-206ENST00000465525 HSCBQ8IWL3 235 aa20.26■□□□□ 0.83
PTPRU-206ENST00000465525 IGDCC4Q8TDY8 1250 aa20.26■□□□□ 0.83
PTPRU-206ENST00000465525 ZSCAN10Q96SZ4 725 aaPredicted RBP20.26■□□□□ 0.83
PTPRU-206ENST00000465525 TNKSO95271 1327 aa20.25■□□□□ 0.83
PTPRU-206ENST00000465525 GREB1LQ9C091 1923 aaPredicted RBP20.25■□□□□ 0.83
PTPRU-206ENST00000465525 JAG1P78504 1218 aa20.25■□□□□ 0.83
PTPRU-206ENST00000465525 DCAF15Q66K64 600 aa20.25■□□□□ 0.83
PTPRU-206ENST00000465525 TATDN1Q6P1N9 297 aa20.25■□□□□ 0.83
PTPRU-206ENST00000465525 SNX21Q969T3 373 aa20.25■□□□□ 0.83
PTPRU-206ENST00000465525 IL17RBQ9NRM6 502 aa20.25■□□□□ 0.83
PTPRU-206ENST00000465525 WDR19Q8NEZ3 1342 aa20.25■□□□□ 0.83
PTPRU-206ENST00000465525 TRAF5O00463 557 aa20.24■□□□□ 0.83
PTPRU-206ENST00000465525 LARGE1O95461 756 aa20.24■□□□□ 0.83
PTPRU-206ENST00000465525 PRKG1Q13976 671 aa20.24■□□□□ 0.83
PTPRU-206ENST00000465525 RAB11FIP4Q86YS3 637 aa20.24■□□□□ 0.83
PTPRU-206ENST00000465525 ENAHQ8N8S7 591 aaPredicted RBP20.24■□□□□ 0.83
PTPRU-206ENST00000465525 TMEM87BQ96K49 555 aa20.24■□□□□ 0.83
PTPRU-206ENST00000465525 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.24■□□□□ 0.83
PTPRU-206ENST00000465525 LY9Q9HBG7 655 aa20.24■□□□□ 0.83
PTPRU-206ENST00000465525 TPCN1Q9ULQ1 816 aa20.24■□□□□ 0.83
PTPRU-206ENST00000465525 NAP1L2Q9ULW6 460 aaPredicted RBP20.24■□□□□ 0.83
PTPRU-206ENST00000465525 IQCA1Q86XH1 822 aa20.23■□□□□ 0.83
PTPRU-206ENST00000465525 NEDD1Q8NHV4 660 aa20.23■□□□□ 0.83
PTPRU-206ENST00000465525 ALDH8A1Q9H2A2 487 aaPredicted RBP20.23■□□□□ 0.83
PTPRU-206ENST00000465525 BRPF3Q9ULD4 1205 aa20.23■□□□□ 0.83
PTPRU-206ENST00000465525 ANGEL1Q9UNK9 670 aaKnown RBP20.23■□□□□ 0.83
PTPRU-206ENST00000465525 MYH4Q9Y623 1939 aa20.23■□□□□ 0.83
PTPRU-206ENST00000465525 ERICH2A1L162 156 aa20.22■□□□□ 0.83
PTPRU-206ENST00000465525 PPP1R12BO60237 982 aaPredicted RBP20.22■□□□□ 0.83
PTPRU-206ENST00000465525 WTAPQ15007 396 aa20.22■□□□□ 0.83
PTPRU-206ENST00000465525 SART3Q15020 963 aaKnown RBP20.22■□□□□ 0.83
PTPRU-206ENST00000465525 SEC23AQ15436 765 aa20.22■□□□□ 0.83
PTPRU-206ENST00000465525 NFXL1Q6ZNB6 911 aa20.22■□□□□ 0.83
PTPRU-206ENST00000465525 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.22■□□□□ 0.83
PTPRU-206ENST00000465525 FMR1Q06787 632 aaKnown RBP eCLIP20.22■□□□□ 0.83
PTPRU-206ENST00000465525 FSTL1Q12841 308 aa20.22■□□□□ 0.83
PTPRU-206ENST00000465525 STK3Q13188 491 aa20.22■□□□□ 0.83
PTPRU-206ENST00000465525 ANKRD1Q15327 319 aa20.22■□□□□ 0.83
PTPRU-206ENST00000465525 ABCB5Q2M3G0 1257 aa20.22■□□□□ 0.83
PTPRU-206ENST00000465525 CEP95Q96GE4 821 aa20.22■□□□□ 0.83
PTPRU-206ENST00000465525 AGXT2Q9BYV1 514 aa20.22■□□□□ 0.83
PTPRU-206ENST00000465525 LIMCH1Q9UPQ0 1083 aa20.22■□□□□ 0.83
PTPRU-206ENST00000465525 KLF18A0A0U1RQI7 1052 aa20.21■□□□□ 0.83
PTPRU-206ENST00000465525 K7ELQ4 463 aaPredicted RBP20.21■□□□□ 0.83
PTPRU-206ENST00000465525 GH2P01242 217 aa20.21■□□□□ 0.83
PTPRU-206ENST00000465525 BECN1Q14457 450 aa20.21■□□□□ 0.83
PTPRU-206ENST00000465525 SPRYD3Q8NCJ5 442 aa20.21■□□□□ 0.83
PTPRU-206ENST00000465525 CCDC17Q96LX7 622 aa20.21■□□□□ 0.83
PTPRU-206ENST00000465525 ZNF341Q9BYN7 854 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms