RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 DIAPH3Q9NSV4 1193 aa13.97□□□□□ -0.17
CUX1-207ENST00000465461 PPP4R2Q9NY27 417 aa13.97□□□□□ -0.17
CUX1-207ENST00000465461 ATAD5Q96QE3 1844 aa13.97□□□□□ -0.17
CUX1-207ENST00000465461 TRIM75PA6NK02 468 aa13.96□□□□□ -0.17
CUX1-207ENST00000465461 TBC1D8O95759 1140 aa13.96□□□□□ -0.17
CUX1-207ENST00000465461 GH2P01242 217 aa13.96□□□□□ -0.17
CUX1-207ENST00000465461 GNAT2P19087 354 aa13.96□□□□□ -0.17
CUX1-207ENST00000465461 GTF2A2P52657 109 aa13.96□□□□□ -0.17
CUX1-207ENST00000465461 SREBF2Q12772 1141 aa13.96□□□□□ -0.17
CUX1-207ENST00000465461 DGKZQ13574 1117 aa13.96□□□□□ -0.17
CUX1-207ENST00000465461 CERKLQ49MI3 558 aaPredicted RBP13.96□□□□□ -0.17
CUX1-207ENST00000465461 IFNL1Q8IU54 200 aa13.96□□□□□ -0.17
CUX1-207ENST00000465461 R3HDMLQ9H3Y0 253 aa13.96□□□□□ -0.17
CUX1-207ENST00000465461 AFG3L2Q9Y4W6 797 aa13.96□□□□□ -0.17
CUX1-207ENST00000465461 HSPA8P11142 646 aaKnown RBP13.95□□□□□ -0.18
CUX1-207ENST00000465461 CDK8P49336 464 aa13.95□□□□□ -0.18
CUX1-207ENST00000465461 LBX1P52954 281 aa13.95□□□□□ -0.18
CUX1-207ENST00000465461 SPP2Q13103 211 aa13.95□□□□□ -0.18
CUX1-207ENST00000465461 AMOTL1Q8IY63 956 aa13.95□□□□□ -0.18
CUX1-207ENST00000465461 FAM43AQ8N2R8 423 aa13.95□□□□□ -0.18
CUX1-207ENST00000465461 ARPP21Q9UBL0 812 aaPredicted RBP13.95□□□□□ -0.18
CUX1-207ENST00000465461 ZBTB21Q9ULJ3 1066 aa13.95□□□□□ -0.18
CUX1-207ENST00000465461 PHIPQ8WWQ0 1821 aa13.94□□□□□ -0.18
CUX1-207ENST00000465461 TESPA1A2RU30 521 aaPredicted RBP13.94□□□□□ -0.18
CUX1-207ENST00000465461 USP17L5A8MUK1 530 aa13.94□□□□□ -0.18
CUX1-207ENST00000465461 MPHOSPH10O00566 681 aaKnown RBP13.94□□□□□ -0.18
CUX1-207ENST00000465461 GUCY1A2P33402 732 aa13.94□□□□□ -0.18
CUX1-207ENST00000465461 SNAPC2Q13487 334 aa13.94□□□□□ -0.18
CUX1-207ENST00000465461 ABCB5Q2M3G0 1257 aa13.94□□□□□ -0.18
CUX1-207ENST00000465461 SBK1Q52WX2 424 aa13.94□□□□□ -0.18
CUX1-207ENST00000465461 GIMAP6Q6P9H5 292 aa13.94□□□□□ -0.18
CUX1-207ENST00000465461 NAPBQ9H115 298 aa13.94□□□□□ -0.18
CUX1-207ENST00000465461 INCENPQ9NQS7 918 aa13.94□□□□□ -0.18
CUX1-207ENST00000465461 KCNH4Q9UQ05 1017 aa13.94□□□□□ -0.18
CUX1-207ENST00000465461 CCDC171Q6TFL3 1326 aa13.93□□□□□ -0.18
CUX1-207ENST00000465461 BTBD19C9JJ37 291 aa13.93□□□□□ -0.18
CUX1-207ENST00000465461 PRDM1O75626 825 aa13.93□□□□□ -0.18
CUX1-207ENST00000465461 HSPD1P10809 573 aaKnown RBP13.93□□□□□ -0.18
CUX1-207ENST00000465461 CETPP11597 493 aa13.93□□□□□ -0.18
CUX1-207ENST00000465461 AKR1B1P15121 316 aa13.93□□□□□ -0.18
CUX1-207ENST00000465461 CHMLP26374 656 aa13.93□□□□□ -0.18
CUX1-207ENST00000465461 CTCFP49711 727 aaPredicted RBP13.93□□□□□ -0.18
CUX1-207ENST00000465461 INHBEP58166 350 aa13.93□□□□□ -0.18
CUX1-207ENST00000465461 CTDSPL2Q05D32 466 aa13.93□□□□□ -0.18
CUX1-207ENST00000465461 MOGSQ13724 837 aa13.93□□□□□ -0.18
CUX1-207ENST00000465461 RAB3GAP1Q15042 981 aa13.93□□□□□ -0.18
CUX1-207ENST00000465461 GADL1Q6ZQY3 521 aa13.93□□□□□ -0.18
CUX1-207ENST00000465461 C16orf86Q6ZW13 317 aa13.93□□□□□ -0.18
CUX1-207ENST00000465461 CLEC10AQ8IUN9 316 aa13.93□□□□□ -0.18
CUX1-207ENST00000465461 REM2Q8IYK8 340 aaPredicted RBP13.93□□□□□ -0.18
CUX1-207ENST00000465461 NACAP1Q9BZK3 213 aa13.93□□□□□ -0.18
CUX1-207ENST00000465461 TACC3Q9Y6A5 838 aa13.93□□□□□ -0.18
CUX1-207ENST00000465461 HIP1O00291 1037 aa13.92□□□□□ -0.18
CUX1-207ENST00000465461 CXCL11O14625 94 aa13.92□□□□□ -0.18
CUX1-207ENST00000465461 FGAP02671 866 aa13.92□□□□□ -0.18
CUX1-207ENST00000465461 ASNSP08243 561 aa13.92□□□□□ -0.18
CUX1-207ENST00000465461 PPARAQ07869 468 aa13.92□□□□□ -0.18
CUX1-207ENST00000465461 SEPT2Q15019 361 aa13.92□□□□□ -0.18
CUX1-207ENST00000465461 ERICH6BQ5W0A0 696 aa13.92□□□□□ -0.18
CUX1-207ENST00000465461 ZNF280CQ8ND82 737 aa13.92□□□□□ -0.18
CUX1-207ENST00000465461 SWAP70Q9UH65 585 aa13.92□□□□□ -0.18
CUX1-207ENST00000465461 PCNTO95613 3336 aa13.92□□□□□ -0.18
CUX1-207ENST00000465461 LAMB1P07942 1786 aa13.91□□□□□ -0.18
CUX1-207ENST00000465461 A0A0G2JLL6 359 aaPredicted RBP13.91□□□□□ -0.18
CUX1-207ENST00000465461 HMGCS2P54868 508 aa13.91□□□□□ -0.18
CUX1-207ENST00000465461 HAND2P61296 217 aa13.91□□□□□ -0.18
CUX1-207ENST00000465461 MTMR2Q13614 643 aa13.91□□□□□ -0.18
CUX1-207ENST00000465461 ZYXQ15942 572 aaKnown RBP13.91□□□□□ -0.18
CUX1-207ENST00000465461 GPAT2Q6NUI2 795 aa13.91□□□□□ -0.18
CUX1-207ENST00000465461 PRRT2Q7Z6L0 340 aaPredicted RBP13.91□□□□□ -0.18
CUX1-207ENST00000465461 TICAM2Q86XR7 235 aa13.91□□□□□ -0.18
CUX1-207ENST00000465461 ACER1Q8TDN7 264 aa13.91□□□□□ -0.18
CUX1-207ENST00000465461 AS3MTQ9HBK9 375 aa13.91□□□□□ -0.18
CUX1-207ENST00000465461 CABP5Q9NP86 173 aa13.91□□□□□ -0.18
CUX1-207ENST00000465461 PDHXO00330 501 aa13.9□□□□□ -0.18
CUX1-207ENST00000465461 RASA1P20936 1047 aa13.9□□□□□ -0.18
CUX1-207ENST00000465461 CRHR2Q13324 411 aa13.9□□□□□ -0.18
CUX1-207ENST00000465461 TREML2Q5T2D2 321 aa13.9□□□□□ -0.18
CUX1-207ENST00000465461 OTUD7BQ6GQQ9 843 aa13.9□□□□□ -0.18
CUX1-207ENST00000465461 WDR18Q9BV38 432 aa13.9□□□□□ -0.18
CUX1-207ENST00000465461 MKNK2Q9HBH9 465 aa13.9□□□□□ -0.18
CUX1-207ENST00000465461 SAGE1Q9NXZ1 904 aa13.9□□□□□ -0.18
CUX1-207ENST00000465461 MYH8P13535 1937 aa13.9□□□□□ -0.18
CUX1-207ENST00000465461 ROBO3Q96MS0 1386 aa13.89□□□□□ -0.19
CUX1-207ENST00000465461 A0A1W2PRG0 241 aa13.89□□□□□ -0.19
CUX1-207ENST00000465461 CA12O43570 354 aa13.89□□□□□ -0.19
CUX1-207ENST00000465461 ECM2O94769 699 aaPredicted RBP13.89□□□□□ -0.19
CUX1-207ENST00000465461 BACE1P56817 501 aa13.89□□□□□ -0.19
CUX1-207ENST00000465461 TAF1CQ15572 869 aaPredicted RBP13.89□□□□□ -0.19
CUX1-207ENST00000465461 ALX1Q15699 326 aa13.89□□□□□ -0.19
CUX1-207ENST00000465461 FAM47AQ5JRC9 791 aa13.89□□□□□ -0.19
CUX1-207ENST00000465461 SIAH1Q8IUQ4 282 aa13.89□□□□□ -0.19
CUX1-207ENST00000465461 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.89□□□□□ -0.19
CUX1-207ENST00000465461 PTPRFP10586 1907 aa13.88□□□□□ -0.19
CUX1-207ENST00000465461 USP17L10C9JJH3 530 aa13.88□□□□□ -0.19
CUX1-207ENST00000465461 ALDH1A1P00352 501 aa13.88□□□□□ -0.19
CUX1-207ENST00000465461 CYP2C8P10632 490 aa13.88□□□□□ -0.19
CUX1-207ENST00000465461 MFAP1P55081 439 aaKnown RBP13.88□□□□□ -0.19
CUX1-207ENST00000465461 PTH1RQ03431 593 aa13.88□□□□□ -0.19
CUX1-207ENST00000465461 BMP2KLQ5H9B9 411 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms