RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 MARCH10Q8NA82 808 aaPredicted RBP20.98■□□□□ 0.95
SYNE4-204ENST00000465425 ERO1AQ96HE7 468 aa20.98■□□□□ 0.95
SYNE4-204ENST00000465425 CCDC34Q96HJ3 373 aa20.98■□□□□ 0.95
SYNE4-204ENST00000465425 ZSCAN10Q96SZ4 725 aaPredicted RBP20.98■□□□□ 0.95
SYNE4-204ENST00000465425 MAN1B1Q9UKM7 699 aa20.98■□□□□ 0.95
SYNE4-204ENST00000465425 TUBB4AP04350 444 aa20.98■□□□□ 0.95
SYNE4-204ENST00000465425 BMP6P22004 513 aa20.98■□□□□ 0.95
SYNE4-204ENST00000465425 HOMER1Q86YM7 354 aa20.98■□□□□ 0.95
SYNE4-204ENST00000465425 VSTM4Q8IW00 320 aa20.98■□□□□ 0.95
SYNE4-204ENST00000465425 ENAHQ8N8S7 591 aaPredicted RBP20.98■□□□□ 0.95
SYNE4-204ENST00000465425 MLKLQ8NB16 471 aa20.98■□□□□ 0.95
SYNE4-204ENST00000465425 FEZ1Q99689 392 aa20.98■□□□□ 0.95
SYNE4-204ENST00000465425 RIOK1Q9BRS2 568 aaKnown RBP20.98■□□□□ 0.95
SYNE4-204ENST00000465425 SPDYE4A6NLX3 237 aa20.97■□□□□ 0.95
SYNE4-204ENST00000465425 SLU7O95391 586 aaKnown RBP20.97■□□□□ 0.95
SYNE4-204ENST00000465425 PDE4BQ07343 736 aa20.97■□□□□ 0.95
SYNE4-204ENST00000465425 CLEC4GQ6UXB4 293 aa20.97■□□□□ 0.95
SYNE4-204ENST00000465425 BSDC1Q9NW68 430 aaPredicted RBP20.97■□□□□ 0.95
SYNE4-204ENST00000465425 CDK11BP21127 795 aaKnown RBP20.96■□□□□ 0.95
SYNE4-204ENST00000465425 ERFEQ4G0M1 354 aa20.96■□□□□ 0.95
SYNE4-204ENST00000465425 NT5DC1Q5TFE4 455 aa20.96■□□□□ 0.95
SYNE4-204ENST00000465425 SYT10Q6XYQ8 523 aa20.96■□□□□ 0.95
SYNE4-204ENST00000465425 VPS54Q9P1Q0 977 aa20.96■□□□□ 0.95
SYNE4-204ENST00000465425 TRIM75PA6NK02 468 aa20.96■□□□□ 0.95
SYNE4-204ENST00000465425 GTF2E1P29083 439 aaPredicted RBP20.96■□□□□ 0.95
SYNE4-204ENST00000465425 KRT2P35908 639 aa20.96■□□□□ 0.95
SYNE4-204ENST00000465425 TRIML1Q8N9V2 468 aa20.96■□□□□ 0.95
SYNE4-204ENST00000465425 SMARCC1Q92922 1105 aaPredicted RBP20.96■□□□□ 0.95
SYNE4-204ENST00000465425 BRIP1Q9BX63 1249 aa20.96■□□□□ 0.95
SYNE4-204ENST00000465425 CSRNP2Q9H175 543 aa20.96■□□□□ 0.95
SYNE4-204ENST00000465425 LAMB2P55268 1798 aa20.96■□□□□ 0.95
SYNE4-204ENST00000465425 PRR29P0C7W0 189 aa20.95■□□□□ 0.94
SYNE4-204ENST00000465425 HSP90AA4PQ58FG1 418 aa20.95■□□□□ 0.94
SYNE4-204ENST00000465425 RBM28Q9NW13 759 aaKnown RBP20.95■□□□□ 0.94
SYNE4-204ENST00000465425 NFE2L3Q9Y4A8 694 aa20.95■□□□□ 0.94
SYNE4-204ENST00000465425 DYNLL1P63167 89 aaKnown RBP20.95■□□□□ 0.94
SYNE4-204ENST00000465425 BRMS1Q9HCU9 246 aa20.95■□□□□ 0.94
SYNE4-204ENST00000465425 TMEM232C9JQI7 657 aa20.94■□□□□ 0.94
SYNE4-204ENST00000465425 SMIM22K7EJ46 135 aa20.94■□□□□ 0.94
SYNE4-204ENST00000465425 PRDM1O75626 825 aa20.94■□□□□ 0.94
SYNE4-204ENST00000465425 PCP11498 1178 aaKnown RBP20.94■□□□□ 0.94
SYNE4-204ENST00000465425 SF3B3Q15393 1217 aaKnown RBP20.94■□□□□ 0.94
SYNE4-204ENST00000465425 PRDM10Q9NQV6 1147 aa20.94■□□□□ 0.94
SYNE4-204ENST00000465425 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.94■□□□□ 0.94
SYNE4-204ENST00000465425 V9GYY5 206 aaPredicted RBP20.94■□□□□ 0.94
SYNE4-204ENST00000465425 MYH14Q7Z406 1995 aaKnown RBP20.94■□□□□ 0.94
SYNE4-204ENST00000465425 CYP2D7A0A087X1C5 515 aa20.94■□□□□ 0.94
SYNE4-204ENST00000465425 CALM1P0DP23 149 aa20.94■□□□□ 0.94
SYNE4-204ENST00000465425 CALM2P0DP24 149 aa20.94■□□□□ 0.94
SYNE4-204ENST00000465425 CALM3P0DP25 149 aa20.94■□□□□ 0.94
SYNE4-204ENST00000465425 SARSP49591 514 aaKnown RBP20.94■□□□□ 0.94
SYNE4-204ENST00000465425 MORC3Q14149 939 aa20.94■□□□□ 0.94
SYNE4-204ENST00000465425 GRAMD1CQ8IYS0 662 aa20.94■□□□□ 0.94
SYNE4-204ENST00000465425 MINPP1Q9UNW1 487 aa20.94■□□□□ 0.94
SYNE4-204ENST00000465425 COL22A1Q8NFW1 1626 aaPredicted RBP20.94■□□□□ 0.94
SYNE4-204ENST00000465425 ROBO1Q9Y6N7 1651 aa20.93■□□□□ 0.94
SYNE4-204ENST00000465425 COL1A1P02452 1464 aaPredicted RBP20.93■□□□□ 0.94
SYNE4-204ENST00000465425 WTIPA6NIX2 430 aaPredicted RBP20.93■□□□□ 0.94
SYNE4-204ENST00000465425 PRPF3O43395 683 aaKnown RBP20.93■□□□□ 0.94
SYNE4-204ENST00000465425 ACTN4O43707 911 aaKnown RBP20.93■□□□□ 0.94
SYNE4-204ENST00000465425 PKN1Q16512 942 aa20.93■□□□□ 0.94
SYNE4-204ENST00000465425 ZNF827Q17R98 1081 aa20.93■□□□□ 0.94
SYNE4-204ENST00000465425 ENOX1Q8TC92 643 aaKnown RBP20.93■□□□□ 0.94
SYNE4-204ENST00000465425 PHF20Q9BVI0 1012 aa20.93■□□□□ 0.94
SYNE4-204ENST00000465425 V9GY48 417 aaPredicted RBP20.93■□□□□ 0.94
SYNE4-204ENST00000465425 RREB1Q92766 1687 aa20.93■□□□□ 0.94
SYNE4-204ENST00000465425 hCG_1642624A0A1W2PR95 340 aa20.93■□□□□ 0.94
SYNE4-204ENST00000465425 C3orf67Q6ZVT6 689 aa20.93■□□□□ 0.94
SYNE4-204ENST00000465425 FAM84BQ96KN1 310 aaPredicted RBP20.93■□□□□ 0.94
SYNE4-204ENST00000465425 TMX1Q9H3N1 280 aa20.93■□□□□ 0.94
SYNE4-204ENST00000465425 FMR1Q06787 632 aaKnown RBP eCLIP20.92■□□□□ 0.94
SYNE4-204ENST00000465425 PTPN21Q16825 1174 aa20.92■□□□□ 0.94
SYNE4-204ENST00000465425 BICDL1Q6ZP65 573 aa20.92■□□□□ 0.94
SYNE4-204ENST00000465425 USP49Q70CQ1 688 aa20.92■□□□□ 0.94
SYNE4-204ENST00000465425 NUTM2AQ8IVF1 878 aaPredicted RBP20.92■□□□□ 0.94
SYNE4-204ENST00000465425 DHX58Q96C10 678 aa20.92■□□□□ 0.94
SYNE4-204ENST00000465425 AATFQ9NY61 560 aaKnown RBP eCLIP20.92■□□□□ 0.94
SYNE4-204ENST00000465425 CICQ96RK0 1608 aaPredicted RBP20.92■□□□□ 0.94
SYNE4-204ENST00000465425 PLEKHA8P1O95397 391 aa20.92■□□□□ 0.94
SYNE4-204ENST00000465425 BMP15O95972 392 aa20.92■□□□□ 0.94
SYNE4-204ENST00000465425 TRMT44Q8IYL2 757 aaKnown RBP20.92■□□□□ 0.94
SYNE4-204ENST00000465425 L2HGDHQ9H9P8 463 aa20.92■□□□□ 0.94
SYNE4-204ENST00000465425 OGFRQ9NZT2 677 aa20.92■□□□□ 0.94
SYNE4-204ENST00000465425 DUOX1Q9NRD9 1551 aa20.91■□□□□ 0.94
SYNE4-204ENST00000465425 COL4A1P02462 1669 aa20.91■□□□□ 0.94
SYNE4-204ENST00000465425 FAM205CA6NFA0 338 aa20.91■□□□□ 0.94
SYNE4-204ENST00000465425 ETF1P62495 437 aaKnown RBP20.91■□□□□ 0.94
SYNE4-204ENST00000465425 ELF2Q15723 593 aa20.91■□□□□ 0.94
SYNE4-204ENST00000465425 CTR9Q6PD62 1173 aa20.91■□□□□ 0.94
SYNE4-204ENST00000465425 ZNF397Q8NF99 534 aaPredicted RBP20.91■□□□□ 0.94
SYNE4-204ENST00000465425 INTS13Q9NVM9 706 aa20.91■□□□□ 0.94
SYNE4-204ENST00000465425 USP17L12C9JPN9 530 aa20.9■□□□□ 0.94
SYNE4-204ENST00000465425 USP17L21D6R901 530 aa20.9■□□□□ 0.94
SYNE4-204ENST00000465425 ARHGAP6O43182 974 aa20.9■□□□□ 0.94
SYNE4-204ENST00000465425 ZSCAN12O43309 604 aa20.9■□□□□ 0.94
SYNE4-204ENST00000465425 DDAH1O94760 285 aa20.9■□□□□ 0.94
SYNE4-204ENST00000465425 GOLGA8FQ08AF8 430 aa20.9■□□□□ 0.94
SYNE4-204ENST00000465425 GOLGA8DPQ0D2H9 430 aa20.9■□□□□ 0.94
SYNE4-204ENST00000465425 FUT2Q10981 343 aa20.9■□□□□ 0.94
SYNE4-204ENST00000465425 TROAPQ12815 778 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms