RNA–Protein interactions for RNA: ENST00000465224.5

CNNM3-203, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 1 (best)

Gene CNNM3, Length 2,607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-203ENST00000465224 ZKSCAN3Q9BRR0 538 aa11.38□□□□□ -0.59
CNNM3-203ENST00000465224 SEC31BQ9NQW1 1179 aa11.38□□□□□ -0.59
CNNM3-203ENST00000465224 CWC15Q9P013 229 aaKnown RBP11.38□□□□□ -0.59
CNNM3-203ENST00000465224 SLIT2O94813 1529 aa11.38□□□□□ -0.59
CNNM3-203ENST00000465224 FOXN1O15353 648 aa11.38□□□□□ -0.59
CNNM3-203ENST00000465224 GNL2Q13823 731 aaKnown RBP11.38□□□□□ -0.59
CNNM3-203ENST00000465224 PUM3Q15397 648 aaKnown RBP11.38□□□□□ -0.59
CNNM3-203ENST00000465224 NOM1Q5C9Z4 860 aaKnown RBP11.38□□□□□ -0.59
CNNM3-203ENST00000465224 DZIP3Q86Y13 1208 aaKnown RBP11.38□□□□□ -0.59
CNNM3-203ENST00000465224 CMTR1Q8N1G2 835 aaKnown RBP11.38□□□□□ -0.59
CNNM3-203ENST00000465224 LPIN2Q92539 896 aa11.38□□□□□ -0.59
CNNM3-203ENST00000465224 TMEM87BQ96K49 555 aa11.38□□□□□ -0.59
CNNM3-203ENST00000465224 SLC26A6Q9BXS9 759 aa11.38□□□□□ -0.59
CNNM3-203ENST00000465224 UBXN6Q9BZV1 441 aa11.38□□□□□ -0.59
CNNM3-203ENST00000465224 TUBE1Q9UJT0 475 aa11.38□□□□□ -0.59
CNNM3-203ENST00000465224 ITGB4P16144 1822 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 GSG1L2A8MUP6 293 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 IFIT3O14879 490 aaKnown RBP11.37□□□□□ -0.59
CNNM3-203ENST00000465224 PPP6R2O75170 966 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 CDKL5O76039 1030 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 SLU7O95391 586 aaKnown RBP11.37□□□□□ -0.59
CNNM3-203ENST00000465224 CALRP27797 417 aaKnown RBP11.37□□□□□ -0.59
CNNM3-203ENST00000465224 GSDMDP57764 484 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 FANCCQ00597 558 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 ZKSCAN8Q15776 578 aaPredicted RBP11.37□□□□□ -0.59
CNNM3-203ENST00000465224 RESP18Q5W5W9 173 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 SGMS1Q86VZ5 419 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 METTL16Q86W50 562 aaKnown RBP11.37□□□□□ -0.59
CNNM3-203ENST00000465224 CCDC82Q8N4S0 544 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 OTUD6BQ8N6M0 293 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 ANKRD20A12PQ8NF67 263 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 IMPACTQ9P2X3 320 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 UQCRFS1P1P0C7P4 283 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 MAGEA9P43362 315 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 GRIN1Q05586 938 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 ALX1Q15699 326 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 SUSD4Q5VX71 490 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 ZNF34Q8IZ26 560 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 GOLGA5Q8TBA6 731 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 KCNJ14Q9UNX9 436 aa11.37□□□□□ -0.59
CNNM3-203ENST00000465224 BCL9O00512 1426 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 COL16A1Q07092 1604 aaPredicted RBP11.36□□□□□ -0.59
CNNM3-203ENST00000465224 MYH3P11055 1940 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 NUP98P52948 1817 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 BTBD18B2RXH4 712 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 SMIM22K7EJ46 135 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 TOB1P50616 345 aaPredicted RBP11.36□□□□□ -0.59
CNNM3-203ENST00000465224 BCAMP50895 628 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 TPM4P67936 248 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 GOLGA8FQ08AF8 430 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 GOLGA8DPQ0D2H9 430 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 RRP12Q5JTH9 1297 aaKnown RBP11.36□□□□□ -0.59
CNNM3-203ENST00000465224 LCORLQ8N3X6 602 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 NAPBQ9H115 298 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 KCND1Q9NSA2 647 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 SLC12A7Q9Y666 1083 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 LRP6O75581 1613 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 ECM29Q5VYK3 1845 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 COL22A1Q8NFW1 1626 aaPredicted RBP11.36□□□□□ -0.59
CNNM3-203ENST00000465224 BMP6P22004 513 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 PDE4BQ07343 736 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 SWT1Q5T5J6 900 aaKnown RBP11.36□□□□□ -0.59
CNNM3-203ENST00000465224 CPLX2Q6PUV4 134 aaKnown RBP11.36□□□□□ -0.59
CNNM3-203ENST00000465224 PPP1R13BQ96KQ4 1090 aa11.36□□□□□ -0.59
CNNM3-203ENST00000465224 FAM237AA0A1B0GTK4 181 aa11.35□□□□□ -0.59
CNNM3-203ENST00000465224 IKBKBO14920 756 aa11.35□□□□□ -0.59
CNNM3-203ENST00000465224 ADAMTS2O95450 1211 aa11.35□□□□□ -0.59
CNNM3-203ENST00000465224 LIFRP42702 1097 aa11.35□□□□□ -0.59
CNNM3-203ENST00000465224 SSRP1Q08945 709 aaKnown RBP11.35□□□□□ -0.59
CNNM3-203ENST00000465224 MIGA1Q8NAN2 632 aa11.35□□□□□ -0.59
CNNM3-203ENST00000465224 MROH5Q6ZUA9 1318 aa11.35□□□□□ -0.59
CNNM3-203ENST00000465224 TMEM232C9JQI7 657 aa11.35□□□□□ -0.59
CNNM3-203ENST00000465224 FMNL1O95466 1100 aaPredicted RBP11.35□□□□□ -0.59
CNNM3-203ENST00000465224 MAP3K12Q12852 859 aa11.35□□□□□ -0.59
CNNM3-203ENST00000465224 TRIM29Q14134 588 aa11.35□□□□□ -0.59
CNNM3-203ENST00000465224 HSP90AA4PQ58FG1 418 aa11.35□□□□□ -0.59
CNNM3-203ENST00000465224 AKNAD1Q5T1N1 836 aa11.35□□□□□ -0.59
CNNM3-203ENST00000465224 MCTP2Q6DN12 878 aa11.35□□□□□ -0.59
CNNM3-203ENST00000465224 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.35□□□□□ -0.59
CNNM3-203ENST00000465224 KCNH3Q9ULD8 1083 aa11.35□□□□□ -0.59
CNNM3-203ENST00000465224 PCDHA5Q9Y5H7 936 aa11.35□□□□□ -0.59
CNNM3-203ENST00000465224 WTIPA6NIX2 430 aaPredicted RBP11.34□□□□□ -0.59
CNNM3-203ENST00000465224 NUTM2BA6NNL0 878 aaPredicted RBP11.34□□□□□ -0.59
CNNM3-203ENST00000465224 NUTM2EB1AL46 878 aaPredicted RBP11.34□□□□□ -0.59
CNNM3-203ENST00000465224 ERVV-1B6SEH8 477 aa11.34□□□□□ -0.59
CNNM3-203ENST00000465224 SLC5A1P13866 664 aa11.34□□□□□ -0.59
CNNM3-203ENST00000465224 SFPQP23246 707 aaKnown RBP eCLIP11.34□□□□□ -0.59
CNNM3-203ENST00000465224 MDM2Q00987 491 aaPredicted RBP11.34□□□□□ -0.59
CNNM3-203ENST00000465224 GPS2Q13227 327 aa11.34□□□□□ -0.59
CNNM3-203ENST00000465224 MAP9Q49MG5 647 aa11.34□□□□□ -0.59
CNNM3-203ENST00000465224 NUTM2AQ8IVF1 878 aaPredicted RBP11.34□□□□□ -0.59
CNNM3-203ENST00000465224 JMYQ8N9B5 988 aa11.34□□□□□ -0.59
CNNM3-203ENST00000465224 FANCLQ9NW38 375 aa11.34□□□□□ -0.59
CNNM3-203ENST00000465224 H0YHG0 523 aa11.34□□□□□ -0.59
CNNM3-203ENST00000465224 CUTAO60888 179 aa11.34□□□□□ -0.59
CNNM3-203ENST00000465224 SASH3O75995 380 aa11.34□□□□□ -0.59
CNNM3-203ENST00000465224 IL6STP40189 918 aaPredicted RBP11.34□□□□□ -0.59
CNNM3-203ENST00000465224 UBASH3AP57075 661 aa11.34□□□□□ -0.59
CNNM3-203ENST00000465224 SARNPP82979 210 aaKnown RBP11.34□□□□□ -0.59
CNNM3-203ENST00000465224 NR5A1Q13285 461 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms