RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 PLAGL2Q9UPG8 496 aa5.67□□□□□ -1.5
SCN3A-206ENST00000465043 CSADQ9Y600 493 aa5.67□□□□□ -1.5
SCN3A-206ENST00000465043 TNIKQ9UKE5 1360 aa5.67□□□□□ -1.5
SCN3A-206ENST00000465043 ERCC6Q03468 1493 aa5.66□□□□□ -1.5
SCN3A-206ENST00000465043 PAPLNO95428 1278 aa5.66□□□□□ -1.5
SCN3A-206ENST00000465043 TTBK2Q6IQ55 1244 aa5.66□□□□□ -1.5
SCN3A-206ENST00000465043 OGFOD2Q6N063 350 aa5.66□□□□□ -1.5
SCN3A-206ENST00000465043 MPRIPQ6WCQ1 1025 aa5.66□□□□□ -1.5
SCN3A-206ENST00000465043 C22orf34Q6ZV56 151 aa5.66□□□□□ -1.5
SCN3A-206ENST00000465043 MFSD2AQ8NA29 543 aa5.66□□□□□ -1.5
SCN3A-206ENST00000465043 SETDB2Q96T68 719 aa5.66□□□□□ -1.5
SCN3A-206ENST00000465043 MBNL3Q9NUK0 354 aaKnown RBP5.66□□□□□ -1.5
SCN3A-206ENST00000465043 LMCD1Q9NZU5 365 aa5.66□□□□□ -1.5
SCN3A-206ENST00000465043 AK5Q9Y6K8 562 aa5.66□□□□□ -1.5
SCN3A-206ENST00000465043 KIF21BO75037 1637 aa5.66□□□□□ -1.5
SCN3A-206ENST00000465043 TDRD9Q8NDG6 1382 aaKnown RBP5.66□□□□□ -1.5
SCN3A-206ENST00000465043 CEP162Q5TB80 1403 aa5.65□□□□□ -1.5
SCN3A-206ENST00000465043 MRC2Q9UBG0 1479 aa5.65□□□□□ -1.5
SCN3A-206ENST00000465043 ITGAEP38570 1179 aa5.65□□□□□ -1.5
SCN3A-206ENST00000465043 ETF1P62495 437 aaKnown RBP5.65□□□□□ -1.5
SCN3A-206ENST00000465043 CCDC85BQ15834 202 aaPredicted RBP5.65□□□□□ -1.5
SCN3A-206ENST00000465043 LRFN4Q6PJG9 635 aa5.65□□□□□ -1.5
SCN3A-206ENST00000465043 HID1Q8IV36 788 aa5.65□□□□□ -1.5
SCN3A-206ENST00000465043 WNT10AQ9GZT5 417 aa5.65□□□□□ -1.5
SCN3A-206ENST00000465043 PRXQ9BXM0 1461 aa5.64□□□□□ -1.51
SCN3A-206ENST00000465043 PRAMEF27A3QJZ7 478 aa5.64□□□□□ -1.51
SCN3A-206ENST00000465043 RNASE1P07998 156 aaKnown RBP5.64□□□□□ -1.51
SCN3A-206ENST00000465043 CYP7A1P22680 504 aa5.64□□□□□ -1.51
SCN3A-206ENST00000465043 IKZF1Q13422 519 aa5.64□□□□□ -1.51
SCN3A-206ENST00000465043 EAPPQ56P03 285 aaPredicted RBP5.64□□□□□ -1.51
SCN3A-206ENST00000465043 RASIP1Q5U651 963 aa5.64□□□□□ -1.51
SCN3A-206ENST00000465043 SPACA3Q8IXA5 215 aa5.64□□□□□ -1.51
SCN3A-206ENST00000465043 FLAD1Q8NFF5 587 aa5.64□□□□□ -1.51
SCN3A-206ENST00000465043 TMEM40Q8WWA1 233 aa5.64□□□□□ -1.51
SCN3A-206ENST00000465043 PLPPR2Q96GM1 343 aa5.64□□□□□ -1.51
SCN3A-206ENST00000465043 CCDC120Q96HB5 630 aa5.64□□□□□ -1.51
SCN3A-206ENST00000465043 U3KQE9 123 aa5.64□□□□□ -1.51
SCN3A-206ENST00000465043 ABCA10Q8WWZ4 1543 aa5.64□□□□□ -1.51
SCN3A-206ENST00000465043 FAM155AB1AL88 458 aaPredicted RBP5.63□□□□□ -1.51
SCN3A-206ENST00000465043 EOMESO95936 686 aa5.63□□□□□ -1.51
SCN3A-206ENST00000465043 INPP5AQ14642 412 aa5.63□□□□□ -1.51
SCN3A-206ENST00000465043 WIPI1Q5MNZ9 446 aaPredicted RBP5.63□□□□□ -1.51
SCN3A-206ENST00000465043 SFRP5Q5T4F7 317 aa5.63□□□□□ -1.51
SCN3A-206ENST00000465043 SND1Q7KZF4 910 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCN3A-206ENST00000465043 LRRN4CLQ8ND94 238 aa5.63□□□□□ -1.51
SCN3A-206ENST00000465043 GAL3ST3Q96A11 431 aa5.63□□□□□ -1.51
SCN3A-206ENST00000465043 PCGF6Q9BYE7 350 aa5.63□□□□□ -1.51
SCN3A-206ENST00000465043 FAM53CQ9NYF3 392 aa5.63□□□□□ -1.51
SCN3A-206ENST00000465043 TPX2Q9ULW0 747 aaKnown RBP5.63□□□□□ -1.51
SCN3A-206ENST00000465043 TTBK1Q5TCY1 1321 aaPredicted RBP5.63□□□□□ -1.51
SCN3A-206ENST00000465043 CARMIL1Q5VZK9 1371 aa5.63□□□□□ -1.51
SCN3A-206ENST00000465043 ZNF865P0CJ78 1059 aaPredicted RBP5.62□□□□□ -1.51
SCN3A-206ENST00000465043 KIR3DL1P43629 444 aa5.62□□□□□ -1.51
SCN3A-206ENST00000465043 ZP2Q05996 745 aa5.62□□□□□ -1.51
SCN3A-206ENST00000465043 SLBPQ14493 270 aaKnown RBP eCLIP5.62□□□□□ -1.51
SCN3A-206ENST00000465043 NKPD1Q17RQ9 610 aa5.62□□□□□ -1.51
SCN3A-206ENST00000465043 AGMOQ6ZNB7 445 aa5.62□□□□□ -1.51
SCN3A-206ENST00000465043 THAP5Q7Z6K1 395 aa5.62□□□□□ -1.51
SCN3A-206ENST00000465043 MFSD4AQ8N468 514 aa5.62□□□□□ -1.51
SCN3A-206ENST00000465043 FAM168AQ92567 244 aa5.62□□□□□ -1.51
SCN3A-206ENST00000465043 MIR1-1HGQ9H1L0 117 aa5.62□□□□□ -1.51
SCN3A-206ENST00000465043 ADAMTS6Q9UKP5 1117 aa5.62□□□□□ -1.51
SCN3A-206ENST00000465043 PITPNM2Q9BZ72 1349 aa5.62□□□□□ -1.51
SCN3A-206ENST00000465043 AQRO60306 1485 aaKnown RBP eCLIP5.62□□□□□ -1.51
SCN3A-206ENST00000465043 ANKRD33BA6NCL7 494 aa5.61□□□□□ -1.51
SCN3A-206ENST00000465043 WDR97A6NE52 1622 aa5.61□□□□□ -1.51
SCN3A-206ENST00000465043 FARP2O94887 1054 aaPredicted RBP5.61□□□□□ -1.51
SCN3A-206ENST00000465043 SLITRK5O94991 958 aa5.61□□□□□ -1.51
SCN3A-206ENST00000465043 CST3P01034 146 aaPredicted RBP5.61□□□□□ -1.51
SCN3A-206ENST00000465043 CLIP1P30622 1438 aa5.61□□□□□ -1.51
SCN3A-206ENST00000465043 CD96P40200 585 aa5.61□□□□□ -1.51
SCN3A-206ENST00000465043 ST13P50502 369 aaKnown RBP5.61□□□□□ -1.51
SCN3A-206ENST00000465043 PTPN11Q06124 597 aaPredicted RBP5.61□□□□□ -1.51
SCN3A-206ENST00000465043 PDE4BQ07343 736 aa5.61□□□□□ -1.51
SCN3A-206ENST00000465043 TARBP1Q13395 1621 aaKnown RBP5.61□□□□□ -1.51
SCN3A-206ENST00000465043 GAPVD1Q14C86 1478 aa5.61□□□□□ -1.51
SCN3A-206ENST00000465043 TSNAXIP1Q2TAA8 658 aa5.61□□□□□ -1.51
SCN3A-206ENST00000465043 LETMD1Q6P1Q0 360 aa5.61□□□□□ -1.51
SCN3A-206ENST00000465043 UBE3DQ7Z6J8 389 aa5.61□□□□□ -1.51
SCN3A-206ENST00000465043 CCDC84Q86UT8 332 aaPredicted RBP5.61□□□□□ -1.51
SCN3A-206ENST00000465043 MIPEPQ99797 713 aa5.61□□□□□ -1.51
SCN3A-206ENST00000465043 DUSP9Q99956 384 aaKnown RBP5.61□□□□□ -1.51
SCN3A-206ENST00000465043 NOC4LQ9BVI4 516 aaKnown RBP5.61□□□□□ -1.51
SCN3A-206ENST00000465043 WDR62O43379 1518 aa5.6□□□□□ -1.51
SCN3A-206ENST00000465043 ERICH3Q5RHP9 1530 aa5.6□□□□□ -1.51
SCN3A-206ENST00000465043 ZNF608Q9ULD9 1512 aaPredicted RBP5.6□□□□□ -1.51
SCN3A-206ENST00000465043 C8AP07357 584 aa5.6□□□□□ -1.51
SCN3A-206ENST00000465043 GRK4P32298 578 aa5.6□□□□□ -1.51
SCN3A-206ENST00000465043 ETV3P41162 512 aa5.6□□□□□ -1.51
SCN3A-206ENST00000465043 AFMP43652 599 aa5.6□□□□□ -1.51
SCN3A-206ENST00000465043 PSMD2Q13200 908 aa5.6□□□□□ -1.51
SCN3A-206ENST00000465043 FZD5Q13467 585 aa5.6□□□□□ -1.51
SCN3A-206ENST00000465043 PKN1Q16512 942 aa5.6□□□□□ -1.51
SCN3A-206ENST00000465043 ZSWIM9Q86XI8 627 aa5.6□□□□□ -1.51
SCN3A-206ENST00000465043 NPAS4Q8IUM7 802 aa5.6□□□□□ -1.51
SCN3A-206ENST00000465043 FBRSQ9HAH7 460 aa5.6□□□□□ -1.51
SCN3A-206ENST00000465043 THOC2Q8NI27 1593 aaKnown RBP5.59□□□□□ -1.51
SCN3A-206ENST00000465043 CARMIL2Q6F5E8 1435 aa5.59□□□□□ -1.51
SCN3A-206ENST00000465043 GFRA2O00451 464 aa5.59□□□□□ -1.51
SCN3A-206ENST00000465043 PDIA4P13667 645 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms