RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 ST14Q9Y5Y6 855 aa8.29□□□□□ -1.08
UBR4-209ENST00000465036 FAM155AB1AL88 458 aaPredicted RBP8.28□□□□□ -1.08
UBR4-209ENST00000465036 USP17L7P0C7H9 530 aa8.28□□□□□ -1.08
UBR4-209ENST00000465036 RPS26P62854 115 aaKnown RBP8.28□□□□□ -1.08
UBR4-209ENST00000465036 MLANAQ16655 118 aa8.28□□□□□ -1.08
UBR4-209ENST00000465036 CARS2Q9HA77 564 aaKnown RBP8.28□□□□□ -1.08
UBR4-209ENST00000465036 C19orf73Q9NVV2 129 aa8.28□□□□□ -1.08
UBR4-209ENST00000465036 TPX2Q9ULW0 747 aaKnown RBP8.28□□□□□ -1.08
UBR4-209ENST00000465036 CAPN6Q9Y6Q1 641 aa8.28□□□□□ -1.08
UBR4-209ENST00000465036 PRAMEF27A3QJZ7 478 aa8.27□□□□□ -1.09
UBR4-209ENST00000465036 PRR33A8MZF0 331 aa8.27□□□□□ -1.09
UBR4-209ENST00000465036 TSPAN15O95858 294 aa8.27□□□□□ -1.09
UBR4-209ENST00000465036 CST3P01034 146 aaPredicted RBP8.27□□□□□ -1.09
UBR4-209ENST00000465036 FYB2Q5VWT5 728 aa8.27□□□□□ -1.09
UBR4-209ENST00000465036 KIRREL1Q96J84 757 aa8.27□□□□□ -1.09
UBR4-209ENST00000465036 MIPEPQ99797 713 aa8.27□□□□□ -1.09
UBR4-209ENST00000465036 ATP13A1Q9HD20 1204 aa8.27□□□□□ -1.09
UBR4-209ENST00000465036 CNTNAP4Q9C0A0 1308 aa8.27□□□□□ -1.09
UBR4-209ENST00000465036 KIR3DL1P43629 444 aa8.26□□□□□ -1.09
UBR4-209ENST00000465036 NKG7Q16617 165 aa8.26□□□□□ -1.09
UBR4-209ENST00000465036 LETMD1Q6P1Q0 360 aa8.26□□□□□ -1.09
UBR4-209ENST00000465036 CYP7A1P22680 504 aa8.25□□□□□ -1.09
UBR4-209ENST00000465036 RAP1GAPP47736 663 aa8.25□□□□□ -1.09
UBR4-209ENST00000465036 ETF1P62495 437 aaKnown RBP8.25□□□□□ -1.09
UBR4-209ENST00000465036 KCNA1Q09470 495 aa8.25□□□□□ -1.09
UBR4-209ENST00000465036 TTBK2Q6IQ55 1244 aa8.25□□□□□ -1.09
UBR4-209ENST00000465036 LIN37Q96GY3 246 aaPredicted RBP8.25□□□□□ -1.09
UBR4-209ENST00000465036 KRTAP4-9Q9BYQ8 210 aa8.25□□□□□ -1.09
UBR4-209ENST00000465036 SUPT5HO00267 1087 aaKnown RBP8.24□□□□□ -1.09
UBR4-209ENST00000465036 GFRA2O00451 464 aa8.24□□□□□ -1.09
UBR4-209ENST00000465036 FGD1P98174 961 aa8.24□□□□□ -1.09
UBR4-209ENST00000465036 TMEM67Q5HYA8 995 aa8.24□□□□□ -1.09
UBR4-209ENST00000465036 WIPI1Q5MNZ9 446 aaPredicted RBP8.24□□□□□ -1.09
UBR4-209ENST00000465036 LCE4AQ5TA78 99 aa8.24□□□□□ -1.09
UBR4-209ENST00000465036 TOX2Q96NM4 488 aa8.24□□□□□ -1.09
UBR4-209ENST00000465036 TTF2Q9UNY4 1162 aaKnown RBP8.24□□□□□ -1.09
UBR4-209ENST00000465036 P4HBP07237 508 aaKnown RBP8.23□□□□□ -1.09
UBR4-209ENST00000465036 GNA15P30679 374 aa8.23□□□□□ -1.09
UBR4-209ENST00000465036 CDKAL1Q5VV42 579 aa8.23□□□□□ -1.09
UBR4-209ENST00000465036 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.23□□□□□ -1.09
UBR4-209ENST00000465036 RIN3Q8TB24 985 aa8.23□□□□□ -1.09
UBR4-209ENST00000465036 PIWIL2Q8TC59 973 aaKnown RBP8.23□□□□□ -1.09
UBR4-209ENST00000465036 H3BS24 57 aa8.22□□□□□ -1.09
UBR4-209ENST00000465036 LDHBP07195 334 aaKnown RBP8.22□□□□□ -1.09
UBR4-209ENST00000465036 PRAMEF13Q5VWM6 474 aa8.22□□□□□ -1.09
UBR4-209ENST00000465036 TMPRSS7Q7RTY8 843 aa8.22□□□□□ -1.09
UBR4-209ENST00000465036 MRPL41Q8IXM3 137 aaKnown RBP8.22□□□□□ -1.09
UBR4-209ENST00000465036 ALPK1Q96QP1 1244 aa8.22□□□□□ -1.09
UBR4-209ENST00000465036 IVNS1ABPQ9Y6Y0 642 aa8.22□□□□□ -1.09
UBR4-209ENST00000465036 EIF4BP23588 611 aaKnown RBP8.21□□□□□ -1.1
UBR4-209ENST00000465036 GRK4P32298 578 aa8.21□□□□□ -1.1
UBR4-209ENST00000465036 MPZL3Q6UWV2 235 aa8.21□□□□□ -1.1
UBR4-209ENST00000465036 AGMOQ6ZNB7 445 aa8.21□□□□□ -1.1
UBR4-209ENST00000465036 PRR23BQ6ZRT6 265 aa8.21□□□□□ -1.1
UBR4-209ENST00000465036 SIAH1Q8IUQ4 282 aa8.21□□□□□ -1.1
UBR4-209ENST00000465036 CFPP27918 469 aa8.2□□□□□ -1.1
UBR4-209ENST00000465036 CDK8P49336 464 aa8.2□□□□□ -1.1
UBR4-209ENST00000465036 SLC6A19Q695T7 634 aa8.2□□□□□ -1.1
UBR4-209ENST00000465036 SYDE1Q6ZW31 735 aaPredicted RBP8.2□□□□□ -1.1
UBR4-209ENST00000465036 UBE2FQ969M7 185 aa8.2□□□□□ -1.1
UBR4-209ENST00000465036 AK5Q9Y6K8 562 aa8.2□□□□□ -1.1
UBR4-209ENST00000465036 PRPF40AO75400 957 aaKnown RBP8.19□□□□□ -1.1
UBR4-209ENST00000465036 CBX7O95931 251 aa8.19□□□□□ -1.1
UBR4-209ENST00000465036 TNK2Q07912 1038 aa8.19□□□□□ -1.1
UBR4-209ENST00000465036 CCDC85BQ15834 202 aaPredicted RBP8.19□□□□□ -1.1
UBR4-209ENST00000465036 ANKLE2Q86XL3 938 aa8.19□□□□□ -1.1
UBR4-209ENST00000465036 C1QL4Q86Z23 238 aa8.19□□□□□ -1.1
UBR4-209ENST00000465036 FBXO15Q8NCQ5 510 aaPredicted RBP8.19□□□□□ -1.1
UBR4-209ENST00000465036 ZSCAN18Q8TBC5 510 aaPredicted RBP8.19□□□□□ -1.1
UBR4-209ENST00000465036 KRT1P04264 644 aa8.18□□□□□ -1.1
UBR4-209ENST00000465036 ETV3P41162 512 aa8.18□□□□□ -1.1
UBR4-209ENST00000465036 TJP2Q9UDY2 1190 aa8.18□□□□□ -1.1
UBR4-209ENST00000465036 ADAM30Q9UKF2 790 aa8.18□□□□□ -1.1
UBR4-209ENST00000465036 ESR1P03372 595 aa8.17□□□□□ -1.1
UBR4-209ENST00000465036 RLBP1P12271 317 aa8.17□□□□□ -1.1
UBR4-209ENST00000465036 RAC2P15153 192 aa8.17□□□□□ -1.1
UBR4-209ENST00000465036 LMNB1P20700 586 aa8.17□□□□□ -1.1
UBR4-209ENST00000465036 ZSWIM5Q9P217 1185 aa8.17□□□□□ -1.1
UBR4-209ENST00000465036 PCDHB5Q9Y5E4 795 aa8.17□□□□□ -1.1
UBR4-209ENST00000465036 LIG3P49916 1009 aa8.16□□□□□ -1.1
UBR4-209ENST00000465036 PDE4BQ07343 736 aa8.16□□□□□ -1.1
UBR4-209ENST00000465036 SEPT6Q14141 434 aa8.16□□□□□ -1.1
UBR4-209ENST00000465036 CDH24Q86UP0 819 aa8.16□□□□□ -1.1
UBR4-209ENST00000465036 MCATQ8IVS2 390 aaKnown RBP8.16□□□□□ -1.1
UBR4-209ENST00000465036 TMEM87BQ96K49 555 aa8.16□□□□□ -1.1
UBR4-209ENST00000465036 MIR1-1HGQ9H1L0 117 aa8.16□□□□□ -1.1
UBR4-209ENST00000465036 PATL2C9JE40 543 aaKnown RBP8.15□□□□□ -1.1
UBR4-209ENST00000465036 PGRP06401 933 aa8.15□□□□□ -1.1
UBR4-209ENST00000465036 TSNAXIP1Q2TAA8 658 aa8.15□□□□□ -1.1
UBR4-209ENST00000465036 GAB4Q2WGN9 574 aa8.15□□□□□ -1.1
UBR4-209ENST00000465036 TTC6Q86TZ1 520 aa8.15□□□□□ -1.1
UBR4-209ENST00000465036 LRRC56Q8IYG6 542 aaPredicted RBP8.15□□□□□ -1.1
UBR4-209ENST00000465036 DNAJB8Q8NHS0 232 aa8.15□□□□□ -1.1
UBR4-209ENST00000465036 ABHD4Q8TB40 342 aa8.15□□□□□ -1.1
UBR4-209ENST00000465036 SLAMF8Q9P0V8 285 aa8.15□□□□□ -1.1
UBR4-209ENST00000465036 TMEM59LQ9UK28 342 aa8.15□□□□□ -1.1
UBR4-209ENST00000465036 NFIBO00712 420 aa8.14□□□□□ -1.11
UBR4-209ENST00000465036 HPXP02790 462 aa8.14□□□□□ -1.11
UBR4-209ENST00000465036 C1QTNF9P0C862 333 aa8.14□□□□□ -1.11
UBR4-209ENST00000465036 RPL6Q02878 288 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms