RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 SWAP70Q9UH65 585 aa14.39□□□□□ -0.11
RPUSD3-211ENST00000464783 TSKSQ9UJT2 592 aa14.39□□□□□ -0.11
RPUSD3-211ENST00000464783 MPHOSPH10O00566 681 aaKnown RBP14.38□□□□□ -0.11
RPUSD3-211ENST00000464783 ASNSP08243 561 aa14.38□□□□□ -0.11
RPUSD3-211ENST00000464783 CETPP11597 493 aa14.38□□□□□ -0.11
RPUSD3-211ENST00000464783 MFAP1P55081 439 aaKnown RBP14.38□□□□□ -0.11
RPUSD3-211ENST00000464783 RRP1BQ14684 758 aaKnown RBP14.38□□□□□ -0.11
RPUSD3-211ENST00000464783 TATDN1Q6P1N9 297 aa14.38□□□□□ -0.11
RPUSD3-211ENST00000464783 CWC27Q6UX04 472 aaKnown RBP14.38□□□□□ -0.11
RPUSD3-211ENST00000464783 CCDC84Q86UT8 332 aaPredicted RBP14.38□□□□□ -0.11
RPUSD3-211ENST00000464783 IFNL1Q8IU54 200 aa14.38□□□□□ -0.11
RPUSD3-211ENST00000464783 DYNLL2Q96FJ2 89 aa14.38□□□□□ -0.11
RPUSD3-211ENST00000464783 AS3MTQ9HBK9 375 aa14.38□□□□□ -0.11
RPUSD3-211ENST00000464783 EPB41L4AQ9HCS5 686 aaPredicted RBP14.38□□□□□ -0.11
RPUSD3-211ENST00000464783 SAGE1Q9NXZ1 904 aa14.38□□□□□ -0.11
RPUSD3-211ENST00000464783 ZBTB21Q9ULJ3 1066 aa14.38□□□□□ -0.11
RPUSD3-211ENST00000464783 TRIM75PA6NK02 468 aa14.37□□□□□ -0.11
RPUSD3-211ENST00000464783 USP17L5A8MUK1 530 aa14.37□□□□□ -0.11
RPUSD3-211ENST00000464783 ALDH1A1P00352 501 aa14.37□□□□□ -0.11
RPUSD3-211ENST00000464783 GH2P01242 217 aa14.37□□□□□ -0.11
RPUSD3-211ENST00000464783 SHMT1P34896 483 aa14.37□□□□□ -0.11
RPUSD3-211ENST00000464783 ABCB5Q2M3G0 1257 aa14.37□□□□□ -0.11
RPUSD3-211ENST00000464783 STK11IPQ8N1F8 1099 aa14.37□□□□□ -0.11
RPUSD3-211ENST00000464783 SLC44A5Q8NCS7 719 aa14.37□□□□□ -0.11
RPUSD3-211ENST00000464783 MS4A4AQ96JQ5 239 aa14.37□□□□□ -0.11
RPUSD3-211ENST00000464783 TBC1D2Q9BYX2 928 aa14.37□□□□□ -0.11
RPUSD3-211ENST00000464783 CABP5Q9NP86 173 aa14.37□□□□□ -0.11
RPUSD3-211ENST00000464783 GINM1Q9NU53 330 aa14.37□□□□□ -0.11
RPUSD3-211ENST00000464783 TAOK2Q9UL54 1235 aa14.37□□□□□ -0.11
RPUSD3-211ENST00000464783 CCDC171Q6TFL3 1326 aa14.37□□□□□ -0.11
RPUSD3-211ENST00000464783 TESPA1A2RU30 521 aaPredicted RBP14.36□□□□□ -0.11
RPUSD3-211ENST00000464783 IGF2BP3O00425 579 aaKnown RBP eCLIP14.36□□□□□ -0.11
RPUSD3-211ENST00000464783 CXCL11O14625 94 aa14.36□□□□□ -0.11
RPUSD3-211ENST00000464783 GABPAQ06546 454 aa14.36□□□□□ -0.11
RPUSD3-211ENST00000464783 RAB3GAP1Q15042 981 aa14.36□□□□□ -0.11
RPUSD3-211ENST00000464783 SHROOM1Q2M3G4 852 aaPredicted RBP14.36□□□□□ -0.11
RPUSD3-211ENST00000464783 SBK1Q52WX2 424 aa14.36□□□□□ -0.11
RPUSD3-211ENST00000464783 GADL1Q6ZQY3 521 aa14.36□□□□□ -0.11
RPUSD3-211ENST00000464783 ZNF589Q86UQ0 364 aaPredicted RBP14.36□□□□□ -0.11
RPUSD3-211ENST00000464783 SKAP1Q86WV1 359 aa14.36□□□□□ -0.11
RPUSD3-211ENST00000464783 ZNF280CQ8ND82 737 aa14.36□□□□□ -0.11
RPUSD3-211ENST00000464783 BRI3BPQ8WY22 251 aa14.36□□□□□ -0.11
RPUSD3-211ENST00000464783 KCNH4Q9UQ05 1017 aa14.36□□□□□ -0.11
RPUSD3-211ENST00000464783 AFG3L2Q9Y4W6 797 aa14.36□□□□□ -0.11
RPUSD3-211ENST00000464783 LOC285556D6RIA3 1793 aa14.35□□□□□ -0.11
RPUSD3-211ENST00000464783 SMIM22K7EJ46 135 aa14.35□□□□□ -0.11
RPUSD3-211ENST00000464783 TBC1D8O95759 1140 aa14.35□□□□□ -0.11
RPUSD3-211ENST00000464783 SLC3A2P08195 630 aaKnown RBP14.35□□□□□ -0.11
RPUSD3-211ENST00000464783 HSPA8P11142 646 aaKnown RBP14.35□□□□□ -0.11
RPUSD3-211ENST00000464783 CDK8P49336 464 aa14.35□□□□□ -0.11
RPUSD3-211ENST00000464783 LBX1P52954 281 aa14.35□□□□□ -0.11
RPUSD3-211ENST00000464783 SPP2Q13103 211 aa14.35□□□□□ -0.11
RPUSD3-211ENST00000464783 VPS53Q5VIR6 699 aa14.35□□□□□ -0.11
RPUSD3-211ENST00000464783 C16orf86Q6ZW13 317 aa14.35□□□□□ -0.11
RPUSD3-211ENST00000464783 PTPN18Q99952 460 aa14.35□□□□□ -0.11
RPUSD3-211ENST00000464783 MKNK2Q9HBH9 465 aa14.35□□□□□ -0.11
RPUSD3-211ENST00000464783 CASP8AP2Q9UKL3 1982 aa14.34□□□□□ -0.11
RPUSD3-211ENST00000464783 LAMA4Q16363 1823 aa14.34□□□□□ -0.11
RPUSD3-211ENST00000464783 A0A0G2JLL6 359 aaPredicted RBP14.34□□□□□ -0.11
RPUSD3-211ENST00000464783 JAG1P78504 1218 aa14.34□□□□□ -0.11
RPUSD3-211ENST00000464783 FASTKD5Q7L8L6 764 aaKnown RBP14.34□□□□□ -0.11
RPUSD3-211ENST00000464783 PRRT2Q7Z6L0 340 aaPredicted RBP14.34□□□□□ -0.11
RPUSD3-211ENST00000464783 RUFY2Q8WXA3 655 aa14.34□□□□□ -0.11
RPUSD3-211ENST00000464783 FEZ1Q99689 392 aa14.34□□□□□ -0.11
RPUSD3-211ENST00000464783 ZNF287Q9HBT7 754 aa14.34□□□□□ -0.11
RPUSD3-211ENST00000464783 ROBO3Q96MS0 1386 aa14.34□□□□□ -0.11
RPUSD3-211ENST00000464783 BTBD19C9JJ37 291 aa14.33□□□□□ -0.12
RPUSD3-211ENST00000464783 HSPD1P10809 573 aaKnown RBP14.33□□□□□ -0.12
RPUSD3-211ENST00000464783 PPARAQ07869 468 aa14.33□□□□□ -0.12
RPUSD3-211ENST00000464783 MTMR2Q13614 643 aa14.33□□□□□ -0.12
RPUSD3-211ENST00000464783 TAF1CQ15572 869 aaPredicted RBP14.33□□□□□ -0.12
RPUSD3-211ENST00000464783 TMEM179Q6ZVK1 233 aa14.33□□□□□ -0.12
RPUSD3-211ENST00000464783 FAM43AQ8N2R8 423 aa14.33□□□□□ -0.12
RPUSD3-211ENST00000464783 CCDC17Q96LX7 622 aa14.33□□□□□ -0.12
RPUSD3-211ENST00000464783 FOXP2O15409 715 aa14.32□□□□□ -0.12
RPUSD3-211ENST00000464783 AKR1B1P15121 316 aa14.32□□□□□ -0.12
RPUSD3-211ENST00000464783 CHMLP26374 656 aa14.32□□□□□ -0.12
RPUSD3-211ENST00000464783 HMGCS2P54868 508 aa14.32□□□□□ -0.12
RPUSD3-211ENST00000464783 PDE4BQ07343 736 aa14.32□□□□□ -0.12
RPUSD3-211ENST00000464783 SEPT2Q15019 361 aa14.32□□□□□ -0.12
RPUSD3-211ENST00000464783 ANKRD23Q86SG2 305 aa14.32□□□□□ -0.12
RPUSD3-211ENST00000464783 WDR18Q9BV38 432 aa14.32□□□□□ -0.12
RPUSD3-211ENST00000464783 ZFYVE28Q9HCC9 887 aa14.32□□□□□ -0.12
RPUSD3-211ENST00000464783 ZCCHC17Q9NP64 241 aaKnown RBP14.32□□□□□ -0.12
RPUSD3-211ENST00000464783 TMOD4Q9NZQ9 345 aa14.32□□□□□ -0.12
RPUSD3-211ENST00000464783 MYH4Q9Y623 1939 aa14.32□□□□□ -0.12
RPUSD3-211ENST00000464783 RAD50Q92878 1312 aa14.32□□□□□ -0.12
RPUSD3-211ENST00000464783 USP17L10C9JJH3 530 aa14.31□□□□□ -0.12
RPUSD3-211ENST00000464783 PDHXO00330 501 aa14.31□□□□□ -0.12
RPUSD3-211ENST00000464783 PRDM1O75626 825 aa14.31□□□□□ -0.12
RPUSD3-211ENST00000464783 FGAP02671 866 aa14.31□□□□□ -0.12
RPUSD3-211ENST00000464783 BACE1P56817 501 aa14.31□□□□□ -0.12
RPUSD3-211ENST00000464783 CTDSPL2Q05D32 466 aa14.31□□□□□ -0.12
RPUSD3-211ENST00000464783 CRHR2Q13324 411 aa14.31□□□□□ -0.12
RPUSD3-211ENST00000464783 ALX1Q15699 326 aa14.31□□□□□ -0.12
RPUSD3-211ENST00000464783 ZYXQ15942 572 aaKnown RBP14.31□□□□□ -0.12
RPUSD3-211ENST00000464783 BMP2KLQ5H9B9 411 aa14.31□□□□□ -0.12
RPUSD3-211ENST00000464783 ZNF444Q8N0Y2 327 aaPredicted RBP14.31□□□□□ -0.12
RPUSD3-211ENST00000464783 ZMYM6O95789 1325 aa14.31□□□□□ -0.12
RPUSD3-211ENST00000464783 GREB1LQ9C091 1923 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 713.3 ms