RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 GINM1Q9NU53 330 aa31.35■■■□□ 2.61
U2AF1-206ENST00000464750 SRRDQ9UH36 339 aa31.35■■■□□ 2.61
U2AF1-206ENST00000464750 TCRBV5S4A2TA0A5A2 114 aa31.34■■■□□ 2.61
U2AF1-206ENST00000464750 FCGRTP55899 365 aa31.34■■■□□ 2.61
U2AF1-206ENST00000464750 SH3D19Q5HYK7 790 aa31.34■■■□□ 2.61
U2AF1-206ENST00000464750 MYPNQ86TC9 1320 aa31.33■■■□□ 2.61
U2AF1-206ENST00000464750 HOXD10P28358 340 aa31.33■■■□□ 2.61
U2AF1-206ENST00000464750 MTMR2Q13614 643 aa31.33■■■□□ 2.61
U2AF1-206ENST00000464750 TTC6Q86TZ1 520 aa31.33■■■□□ 2.61
U2AF1-206ENST00000464750 SH3TC2Q8TF17 1288 aa31.33■■■□□ 2.61
U2AF1-206ENST00000464750 HAUS7Q99871 368 aa31.33■■■□□ 2.61
U2AF1-206ENST00000464750 CRNKL1Q9BZJ0 848 aaKnown RBP31.33■■■□□ 2.61
U2AF1-206ENST00000464750 EHD4Q9H223 541 aa31.33■■■□□ 2.61
U2AF1-206ENST00000464750 SERPINB13Q9UIV8 391 aa31.33■■■□□ 2.61
U2AF1-206ENST00000464750 PABPC4Q13310 644 aaKnown RBP eCLIP31.31■■■□□ 2.6
U2AF1-206ENST00000464750 BRCA2P51587 3418 aa31.3■■■□□ 2.6
U2AF1-206ENST00000464750 BACE1P56817 501 aa31.3■■■□□ 2.6
U2AF1-206ENST00000464750 LCORLQ8N3X6 602 aa31.3■■■□□ 2.6
U2AF1-206ENST00000464750 RAET1EQ8TD07 263 aa31.3■■■□□ 2.6
U2AF1-206ENST00000464750 TMEM106CQ9BVX2 250 aa31.3■■■□□ 2.6
U2AF1-206ENST00000464750 DCTPP1Q9H773 170 aa31.3■■■□□ 2.6
U2AF1-206ENST00000464750 GH2P01242 217 aa31.29■■■□□ 2.6
U2AF1-206ENST00000464750 ADD2P35612 726 aa31.29■■■□□ 2.6
U2AF1-206ENST00000464750 RRP1P56182 461 aaKnown RBP31.29■■■□□ 2.6
U2AF1-206ENST00000464750 TATDN1Q6P1N9 297 aa31.29■■■□□ 2.6
U2AF1-206ENST00000464750 ANKRD13CQ8N6S4 541 aa31.29■■■□□ 2.6
U2AF1-206ENST00000464750 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.29■■■□□ 2.6
U2AF1-206ENST00000464750 TMOD4Q9NZQ9 345 aa31.29■■■□□ 2.6
U2AF1-206ENST00000464750 MYCP01106 439 aaPredicted RBP31.28■■■□□ 2.6
U2AF1-206ENST00000464750 POLR3DP05423 398 aaPredicted RBP31.28■■■□□ 2.6
U2AF1-206ENST00000464750 PRKCZQ05513 592 aa31.28■■■□□ 2.6
U2AF1-206ENST00000464750 MYH8P13535 1937 aa31.28■■■□□ 2.6
U2AF1-206ENST00000464750 BAZ2AQ9UIF9 1905 aaKnown RBP31.28■■■□□ 2.6
U2AF1-206ENST00000464750 USP17L10C9JJH3 530 aa31.27■■■□□ 2.6
U2AF1-206ENST00000464750 PLCD1P51178 756 aa31.27■■■□□ 2.6
U2AF1-206ENST00000464750 FAM110CQ1W6H9 321 aa31.27■■■□□ 2.6
U2AF1-206ENST00000464750 SLFNL1Q499Z3 407 aa31.27■■■□□ 2.6
U2AF1-206ENST00000464750 SDR42E1Q8WUS8 393 aa31.27■■■□□ 2.6
U2AF1-206ENST00000464750 ASCC2Q9H1I8 757 aaPredicted RBP31.27■■■□□ 2.6
U2AF1-206ENST00000464750 ARMT1Q9H993 441 aa31.27■■■□□ 2.6
U2AF1-206ENST00000464750 MCM9Q9NXL9 1143 aa31.27■■■□□ 2.6
U2AF1-206ENST00000464750 DOCK3Q8IZD9 2030 aa31.26■■■□□ 2.59
U2AF1-206ENST00000464750 C19orf81C9J6K1 198 aa31.26■■■□□ 2.59
U2AF1-206ENST00000464750 ECHDC1Q9NTX5 307 aa31.26■■■□□ 2.59
U2AF1-206ENST00000464750 MBD4O95243 580 aa31.25■■■□□ 2.59
U2AF1-206ENST00000464750 EN2P19622 333 aaPredicted RBP31.25■■■□□ 2.59
U2AF1-206ENST00000464750 GCLCP48506 637 aaPredicted RBP31.25■■■□□ 2.59
U2AF1-206ENST00000464750 YTHDC1Q96MU7 727 aaKnown RBP31.25■■■□□ 2.59
U2AF1-206ENST00000464750 DCP1AQ9NPI6 582 aaPredicted RBP31.25■■■□□ 2.59
U2AF1-206ENST00000464750 TNPO2O14787 897 aaKnown RBP31.24■■■□□ 2.59
U2AF1-206ENST00000464750 GRK4P32298 578 aa31.24■■■□□ 2.59
U2AF1-206ENST00000464750 SHMT1P34896 483 aa31.24■■■□□ 2.59
U2AF1-206ENST00000464750 IRX3P78415 501 aaPredicted RBP31.24■■■□□ 2.59
U2AF1-206ENST00000464750 CERKLQ49MI3 558 aaPredicted RBP31.24■■■□□ 2.59
U2AF1-206ENST00000464750 GABRQQ9UN88 632 aa31.24■■■□□ 2.59
U2AF1-206ENST00000464750 PCDHB15Q9Y5E8 787 aa31.24■■■□□ 2.59
U2AF1-206ENST00000464750 CHGBP05060 677 aa31.23■■■□□ 2.59
U2AF1-206ENST00000464750 EVX2Q03828 476 aa31.23■■■□□ 2.59
U2AF1-206ENST00000464750 ABCB5Q2M3G0 1257 aa31.23■■■□□ 2.59
U2AF1-206ENST00000464750 GABPAQ06546 454 aa31.22■■■□□ 2.59
U2AF1-206ENST00000464750 RAB3GAP1Q15042 981 aa31.22■■■□□ 2.59
U2AF1-206ENST00000464750 UBE3CQ15386 1083 aa31.22■■■□□ 2.59
U2AF1-206ENST00000464750 GPATCH3Q96I76 525 aa31.22■■■□□ 2.59
U2AF1-206ENST00000464750 HOXA7P31268 230 aaPredicted RBP31.21■■■□□ 2.59
U2AF1-206ENST00000464750 USP17L2Q6R6M4 530 aa31.21■■■□□ 2.59
U2AF1-206ENST00000464750 FEZ1Q99689 392 aa31.21■■■□□ 2.59
U2AF1-206ENST00000464750 CABP5Q9NP86 173 aa31.21■■■□□ 2.59
U2AF1-206ENST00000464750 PRKAB2O43741 272 aa31.2■■■□□ 2.59
U2AF1-206ENST00000464750 CYP2D6P10635 497 aa31.2■■■□□ 2.59
U2AF1-206ENST00000464750 FLT3LGP49771 235 aa31.2■■■□□ 2.59
U2AF1-206ENST00000464750 TSHZ3Q63HK5 1081 aa31.2■■■□□ 2.59
U2AF1-206ENST00000464750 ZSCAN25Q6NSZ9 544 aa31.2■■■□□ 2.59
U2AF1-206ENST00000464750 SLAIN1Q8ND83 568 aa31.2■■■□□ 2.59
U2AF1-206ENST00000464750 EMILIN3Q9NT22 766 aa31.2■■■□□ 2.59
U2AF1-206ENST00000464750 MKI67P46013 3256 aaKnown RBP31.2■■■□□ 2.59
U2AF1-206ENST00000464750 MTFR1Q15390 333 aa31.19■■■□□ 2.58
U2AF1-206ENST00000464750 ZYXQ15942 572 aaKnown RBP31.19■■■□□ 2.58
U2AF1-206ENST00000464750 COA7Q96BR5 231 aa31.19■■■□□ 2.58
U2AF1-206ENST00000464750 ATP8A2Q9NTI2 1148 aa31.18■■■□□ 2.58
U2AF1-206ENST00000464750 BIN2Q9UBW5 565 aaPredicted RBP31.18■■■□□ 2.58
U2AF1-206ENST00000464750 HERVK_113P62684 666 aa31.17■■■□□ 2.58
U2AF1-206ENST00000464750 C12orf42Q96LP6 360 aa31.17■■■□□ 2.58
U2AF1-206ENST00000464750 CRBNQ96SW2 442 aa31.17■■■□□ 2.58
U2AF1-206ENST00000464750 P2RX7Q99572 595 aaKnown RBP31.17■■■□□ 2.58
U2AF1-206ENST00000464750 MORF4L1Q9UBU8 362 aa31.17■■■□□ 2.58
U2AF1-206ENST00000464750 UBXN2AP68543 259 aa31.16■■■□□ 2.58
U2AF1-206ENST00000464750 PRPF38BQ5VTL8 546 aaKnown RBP31.16■■■□□ 2.58
U2AF1-206ENST00000464750 SLC44A5Q8NCS7 719 aa31.16■■■□□ 2.58
U2AF1-206ENST00000464750 ADCY3O60266 1144 aa31.15■■■□□ 2.58
U2AF1-206ENST00000464750 GUCY1A2P33402 732 aa31.15■■■□□ 2.58
U2AF1-206ENST00000464750 IRF5Q13568 498 aa31.15■■■□□ 2.58
U2AF1-206ENST00000464750 ACER1Q8TDN7 264 aa31.15■■■□□ 2.58
U2AF1-206ENST00000464750 KIAA1683Q9H0B3 1180 aa31.15■■■□□ 2.58
U2AF1-206ENST00000464750 PUS7LQ9H0K6 701 aaKnown RBP31.15■■■□□ 2.58
U2AF1-206ENST00000464750 MPHOSPH10O00566 681 aaKnown RBP31.14■■■□□ 2.58
U2AF1-206ENST00000464750 ELNP15502 786 aa31.14■■■□□ 2.58
U2AF1-206ENST00000464750 USP14P54578 494 aa31.14■■■□□ 2.58
U2AF1-206ENST00000464750 SEPT2Q15019 361 aa31.14■■■□□ 2.58
U2AF1-206ENST00000464750 KBTBD3Q8NAB2 608 aa31.14■■■□□ 2.58
U2AF1-206ENST00000464750 DYNLL2Q96FJ2 89 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms