RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 CHMP4BQ9H444 224 aaKnown RBP16.8■□□□□ 0.28
RPP40-203ENST00000464646 CWC22Q9HCG8 908 aaKnown RBP16.8■□□□□ 0.28
RPP40-203ENST00000464646 POLR3DP05423 398 aaPredicted RBP16.79■□□□□ 0.28
RPP40-203ENST00000464646 GCLCP48506 637 aaPredicted RBP16.79■□□□□ 0.28
RPP40-203ENST00000464646 TTF1Q15361 905 aaPredicted RBP16.79■□□□□ 0.28
RPP40-203ENST00000464646 RPAP2Q8IXW5 612 aaPredicted RBP16.79■□□□□ 0.28
RPP40-203ENST00000464646 ASCC2Q9H1I8 757 aaPredicted RBP16.79■□□□□ 0.28
RPP40-203ENST00000464646 RCAN3Q9UKA8 241 aa16.79■□□□□ 0.28
RPP40-203ENST00000464646 DOCK3Q8IZD9 2030 aa16.79■□□□□ 0.28
RPP40-203ENST00000464646 FOCADQ5VW36 1801 aa16.78■□□□□ 0.28
RPP40-203ENST00000464646 MAGEB6P1A0A0J9YX57 407 aa16.78■□□□□ 0.28
RPP40-203ENST00000464646 USP17L10C9JJH3 530 aa16.78■□□□□ 0.28
RPP40-203ENST00000464646 GOLIM4O00461 696 aa16.78■□□□□ 0.28
RPP40-203ENST00000464646 BACE1P56817 501 aa16.78■□□□□ 0.28
RPP40-203ENST00000464646 RAB3GAP1Q15042 981 aa16.78■□□□□ 0.28
RPP40-203ENST00000464646 FAM110CQ1W6H9 321 aa16.78■□□□□ 0.28
RPP40-203ENST00000464646 SHROOM1Q2M3G4 852 aaPredicted RBP16.78■□□□□ 0.28
RPP40-203ENST00000464646 TTC6Q86TZ1 520 aa16.78■□□□□ 0.28
RPP40-203ENST00000464646 CERS3Q8IU89 383 aa16.78■□□□□ 0.28
RPP40-203ENST00000464646 UNC93B1Q9H1C4 597 aa16.78■□□□□ 0.28
RPP40-203ENST00000464646 DNAJC18Q9H819 358 aa16.78■□□□□ 0.28
RPP40-203ENST00000464646 ZBTB21Q9ULJ3 1066 aa16.78■□□□□ 0.28
RPP40-203ENST00000464646 SIPA1L1O43166 1804 aa16.77■□□□□ 0.28
RPP40-203ENST00000464646 C19orf81C9J6K1 198 aa16.77■□□□□ 0.28
RPP40-203ENST00000464646 TNRC18O15417 2968 aaPredicted RBP16.77■□□□□ 0.28
RPP40-203ENST00000464646 IGSF3O75054 1194 aa16.77■□□□□ 0.28
RPP40-203ENST00000464646 GH2P01242 217 aa16.77■□□□□ 0.28
RPP40-203ENST00000464646 TFRCP02786 760 aaKnown RBP16.77■□□□□ 0.28
RPP40-203ENST00000464646 INHAP05111 366 aa16.77■□□□□ 0.28
RPP40-203ENST00000464646 SLC9C2Q5TAH2 1124 aa16.77■□□□□ 0.28
RPP40-203ENST00000464646 PAGR1Q9BTK6 254 aa16.77■□□□□ 0.28
RPP40-203ENST00000464646 CABP5Q9NP86 173 aa16.77■□□□□ 0.28
RPP40-203ENST00000464646 MPHOSPH10O00566 681 aaKnown RBP16.76■□□□□ 0.27
RPP40-203ENST00000464646 GJB1P08034 283 aa16.76■□□□□ 0.27
RPP40-203ENST00000464646 JAG1P78504 1218 aa16.76■□□□□ 0.27
RPP40-203ENST00000464646 CERKLQ49MI3 558 aaPredicted RBP16.76■□□□□ 0.27
RPP40-203ENST00000464646 SH3D19Q5HYK7 790 aa16.76■□□□□ 0.27
RPP40-203ENST00000464646 U2AF1L4Q8WU68 220 aaKnown RBP16.76■□□□□ 0.27
RPP40-203ENST00000464646 WDR18Q9BV38 432 aa16.76■□□□□ 0.27
RPP40-203ENST00000464646 CRNKL1Q9BZJ0 848 aaKnown RBP16.76■□□□□ 0.27
RPP40-203ENST00000464646 BOLA2Q9H3K6 86 aa16.76■□□□□ 0.27
RPP40-203ENST00000464646 SERPINB13Q9UIV8 391 aa16.76■□□□□ 0.27
RPP40-203ENST00000464646 LOC285556D6RIA3 1793 aa16.76■□□□□ 0.27
RPP40-203ENST00000464646 RAB11FIP3O75154 756 aa16.75■□□□□ 0.27
RPP40-203ENST00000464646 GJA8P48165 433 aa16.75■□□□□ 0.27
RPP40-203ENST00000464646 USP17L2Q6R6M4 530 aa16.75■□□□□ 0.27
RPP40-203ENST00000464646 P2RX7Q99572 595 aaKnown RBP16.75■□□□□ 0.27
RPP40-203ENST00000464646 GINM1Q9NU53 330 aa16.75■□□□□ 0.27
RPP40-203ENST00000464646 MCM9Q9NXL9 1143 aa16.75■□□□□ 0.27
RPP40-203ENST00000464646 ZNF532Q9HCE3 1301 aa16.74■□□□□ 0.27
RPP40-203ENST00000464646 PEX10O60683 326 aa16.74■□□□□ 0.27
RPP40-203ENST00000464646 PDE6AP16499 860 aa16.74■□□□□ 0.27
RPP40-203ENST00000464646 CYP2B6P20813 491 aa16.74■□□□□ 0.27
RPP40-203ENST00000464646 ABCB5Q2M3G0 1257 aa16.74■□□□□ 0.27
RPP40-203ENST00000464646 WDR78Q5VTH9 848 aa16.74■□□□□ 0.27
RPP40-203ENST00000464646 SHISA4Q96DD7 197 aa16.74■□□□□ 0.27
RPP40-203ENST00000464646 DEFB118Q96PH6 123 aa16.74■□□□□ 0.27
RPP40-203ENST00000464646 HTATIP2Q9BUP3 242 aa16.74■□□□□ 0.27
RPP40-203ENST00000464646 FARP2O94887 1054 aaPredicted RBP16.73■□□□□ 0.27
RPP40-203ENST00000464646 SGPL1O95470 568 aa16.73■□□□□ 0.27
RPP40-203ENST00000464646 HERVK_113P62684 666 aa16.73■□□□□ 0.27
RPP40-203ENST00000464646 IRF5Q13568 498 aa16.73■□□□□ 0.27
RPP40-203ENST00000464646 PDE3AQ14432 1141 aa16.73■□□□□ 0.27
RPP40-203ENST00000464646 GPRC5AQ8NFJ5 357 aa16.73■□□□□ 0.27
RPP40-203ENST00000464646 PXYLP1Q8TE99 480 aa16.73■□□□□ 0.27
RPP40-203ENST00000464646 EDC3Q96F86 508 aaKnown RBP16.73■□□□□ 0.27
RPP40-203ENST00000464646 ZBTB40Q9NUA8 1239 aa16.73■□□□□ 0.27
RPP40-203ENST00000464646 NAV1Q8NEY1 1877 aa16.72■□□□□ 0.27
RPP40-203ENST00000464646 HABP4Q5JVS0 413 aaKnown RBP16.72■□□□□ 0.27
RPP40-203ENST00000464646 SDR42E1Q8WUS8 393 aa16.72■□□□□ 0.27
RPP40-203ENST00000464646 PAG1Q9NWQ8 432 aa16.72■□□□□ 0.27
RPP40-203ENST00000464646 H0YGN5 161 aa16.71■□□□□ 0.27
RPP40-203ENST00000464646 HOXA7P31268 230 aaPredicted RBP16.71■□□□□ 0.27
RPP40-203ENST00000464646 PLCD1P51178 756 aa16.71■□□□□ 0.27
RPP40-203ENST00000464646 USP14P54578 494 aa16.71■□□□□ 0.27
RPP40-203ENST00000464646 TMED8Q6PL24 325 aaPredicted RBP16.71■□□□□ 0.27
RPP40-203ENST00000464646 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
RPP40-203ENST00000464646 METTL16Q86W50 562 aaKnown RBP16.71■□□□□ 0.27
RPP40-203ENST00000464646 SIRT2Q8IXJ6 389 aa16.71■□□□□ 0.27
RPP40-203ENST00000464646 AMOTL1Q8IY63 956 aa16.71■□□□□ 0.27
RPP40-203ENST00000464646 NUDT12Q9BQG2 462 aa16.71■□□□□ 0.27
RPP40-203ENST00000464646 RIOK1Q9BRS2 568 aaKnown RBP16.71■□□□□ 0.27
RPP40-203ENST00000464646 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.71■□□□□ 0.27
RPP40-203ENST00000464646 ARMT1Q9H993 441 aa16.71■□□□□ 0.27
RPP40-203ENST00000464646 EMILIN3Q9NT22 766 aa16.71■□□□□ 0.27
RPP40-203ENST00000464646 SMARCA5O60264 1052 aaPredicted RBP16.7■□□□□ 0.26
RPP40-203ENST00000464646 HMGCRP04035 888 aa16.7■□□□□ 0.26
RPP40-203ENST00000464646 C20orf194Q5TEA3 1177 aa16.7■□□□□ 0.26
RPP40-203ENST00000464646 LCORLQ8N3X6 602 aa16.7■□□□□ 0.26
RPP40-203ENST00000464646 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.7■□□□□ 0.26
RPP40-203ENST00000464646 DDRGK1Q96HY6 314 aa16.7■□□□□ 0.26
RPP40-203ENST00000464646 LRRCC1Q9C099 1032 aa16.7■□□□□ 0.26
RPP40-203ENST00000464646 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.7■□□□□ 0.26
RPP40-203ENST00000464646 EHD4Q9H223 541 aa16.7■□□□□ 0.26
RPP40-203ENST00000464646 TXNRD2Q9NNW7 524 aa16.7■□□□□ 0.26
RPP40-203ENST00000464646 USP17L15C9J2P7 530 aa16.69■□□□□ 0.26
RPP40-203ENST00000464646 USP17L13C9JLJ4 530 aa16.69■□□□□ 0.26
RPP40-203ENST00000464646 USP17L11C9JVI0 530 aa16.69■□□□□ 0.26
RPP40-203ENST00000464646 USP17L18D6R9N7 530 aa16.69■□□□□ 0.26
RPP40-203ENST00000464646 USP17L22D6RA61 530 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms