RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 MOGSQ13724 837 aa20.43■□□□□ 0.86
VPS52-215ENST00000464425 TATDN1Q6P1N9 297 aa20.43■□□□□ 0.86
VPS52-215ENST00000464425 DYNLL2Q96FJ2 89 aa20.43■□□□□ 0.86
VPS52-215ENST00000464425 CFHR5Q9BXR6 569 aa20.43■□□□□ 0.86
VPS52-215ENST00000464425 DOCK1Q14185 1865 aa20.42■□□□□ 0.86
VPS52-215ENST00000464425 NAV1Q8NEY1 1877 aa20.42■□□□□ 0.86
VPS52-215ENST00000464425 GH2P01242 217 aa20.42■□□□□ 0.86
VPS52-215ENST00000464425 GABPAQ06546 454 aa20.42■□□□□ 0.86
VPS52-215ENST00000464425 TAF1CQ15572 869 aaPredicted RBP20.42■□□□□ 0.86
VPS52-215ENST00000464425 CERKLQ49MI3 558 aaPredicted RBP20.42■□□□□ 0.86
VPS52-215ENST00000464425 C12orf60Q5U649 245 aa20.42■□□□□ 0.86
VPS52-215ENST00000464425 CTR9Q6PD62 1173 aa20.42■□□□□ 0.86
VPS52-215ENST00000464425 GADL1Q6ZQY3 521 aa20.42■□□□□ 0.86
VPS52-215ENST00000464425 AMOTL1Q8IY63 956 aa20.42■□□□□ 0.86
VPS52-215ENST00000464425 TNS4Q8IZW8 715 aa20.42■□□□□ 0.86
VPS52-215ENST00000464425 SLC44A5Q8NCS7 719 aa20.42■□□□□ 0.86
VPS52-215ENST00000464425 ZNF280CQ8ND82 737 aa20.42■□□□□ 0.86
VPS52-215ENST00000464425 ZNF296Q8WUU4 475 aaPredicted RBP20.42■□□□□ 0.86
VPS52-215ENST00000464425 ZBTB21Q9ULJ3 1066 aa20.42■□□□□ 0.86
VPS52-215ENST00000464425 A0A0G2JLL6 359 aaPredicted RBP20.41■□□□□ 0.86
VPS52-215ENST00000464425 GNAT2P19087 354 aa20.41■□□□□ 0.86
VPS52-215ENST00000464425 CCDC129Q6ZRS4 1044 aa20.41■□□□□ 0.86
VPS52-215ENST00000464425 PRRT2Q7Z6L0 340 aaPredicted RBP20.41■□□□□ 0.86
VPS52-215ENST00000464425 ZFYVE28Q9HCC9 887 aa20.41■□□□□ 0.86
VPS52-215ENST00000464425 PATL2C9JE40 543 aaKnown RBP20.4■□□□□ 0.86
VPS52-215ENST00000464425 PDHXO00330 501 aa20.4■□□□□ 0.86
VPS52-215ENST00000464425 LAMB1P07942 1786 aa20.4■□□□□ 0.86
VPS52-215ENST00000464425 ABCB5Q2M3G0 1257 aa20.4■□□□□ 0.86
VPS52-215ENST00000464425 GPAT2Q6NUI2 795 aa20.4■□□□□ 0.86
VPS52-215ENST00000464425 FASTKD5Q7L8L6 764 aaKnown RBP20.4■□□□□ 0.86
VPS52-215ENST00000464425 ANKRD23Q86SG2 305 aa20.4■□□□□ 0.86
VPS52-215ENST00000464425 AS3MTQ9HBK9 375 aa20.4■□□□□ 0.86
VPS52-215ENST00000464425 GINM1Q9NU53 330 aa20.4■□□□□ 0.86
VPS52-215ENST00000464425 BAZ2AQ9UIF9 1905 aaKnown RBP20.39■□□□□ 0.86
VPS52-215ENST00000464425 DDX60LQ5H9U9 1706 aaKnown RBP20.39■□□□□ 0.86
VPS52-215ENST00000464425 MINDY4BA8MYZ0 360 aa20.39■□□□□ 0.85
VPS52-215ENST00000464425 FKTNO75072 461 aa20.39■□□□□ 0.85
VPS52-215ENST00000464425 TDO2P48775 406 aa20.39■□□□□ 0.85
VPS52-215ENST00000464425 RAB3GAP1Q15042 981 aa20.39■□□□□ 0.85
VPS52-215ENST00000464425 STK11IPQ8N1F8 1099 aa20.39■□□□□ 0.85
VPS52-215ENST00000464425 FAM227BQ96M60 508 aa20.39■□□□□ 0.85
VPS52-215ENST00000464425 TBC1D2Q9BYX2 928 aa20.39■□□□□ 0.85
VPS52-215ENST00000464425 EPB41L4AQ9HCS5 686 aaPredicted RBP20.39■□□□□ 0.85
VPS52-215ENST00000464425 MPHOSPH10O00566 681 aaKnown RBP20.38■□□□□ 0.85
VPS52-215ENST00000464425 HMGCS2P54868 508 aa20.38■□□□□ 0.85
VPS52-215ENST00000464425 DGKZQ13574 1117 aa20.38■□□□□ 0.85
VPS52-215ENST00000464425 GIMAP6Q6P9H5 292 aa20.38■□□□□ 0.85
VPS52-215ENST00000464425 IFNL3Q8IZI9 196 aa20.38■□□□□ 0.85
VPS52-215ENST00000464425 WDR18Q9BV38 432 aa20.38■□□□□ 0.85
VPS52-215ENST00000464425 ZCCHC17Q9NP64 241 aaKnown RBP20.38■□□□□ 0.85
VPS52-215ENST00000464425 CABP5Q9NP86 173 aa20.38■□□□□ 0.85
VPS52-215ENST00000464425 HELLSQ9NRZ9 838 aa20.38■□□□□ 0.85
VPS52-215ENST00000464425 ARPP21Q9UBL0 812 aaPredicted RBP20.38■□□□□ 0.85
VPS52-215ENST00000464425 SWAP70Q9UH65 585 aa20.38■□□□□ 0.85
VPS52-215ENST00000464425 PHIPQ8WWQ0 1821 aa20.37■□□□□ 0.85
VPS52-215ENST00000464425 ATAD5Q96QE3 1844 aa20.37■□□□□ 0.85
VPS52-215ENST00000464425 A0A0D9SFI3 127 aa20.37■□□□□ 0.85
VPS52-215ENST00000464425 CDK8P49336 464 aa20.37■□□□□ 0.85
VPS52-215ENST00000464425 NMIQ13287 307 aaPredicted RBP20.37■□□□□ 0.85
VPS52-215ENST00000464425 MTMR2Q13614 643 aa20.37■□□□□ 0.85
VPS52-215ENST00000464425 NOM1Q5C9Z4 860 aaKnown RBP20.37■□□□□ 0.85
VPS52-215ENST00000464425 NACAP1Q9BZK3 213 aa20.37■□□□□ 0.85
VPS52-215ENST00000464425 CYP2C8P10632 490 aa20.36■□□□□ 0.85
VPS52-215ENST00000464425 SDSP20132 328 aa20.36■□□□□ 0.85
VPS52-215ENST00000464425 MCMDC2Q4G0Z9 681 aa20.36■□□□□ 0.85
VPS52-215ENST00000464425 SBK1Q52WX2 424 aa20.36■□□□□ 0.85
VPS52-215ENST00000464425 TREML2Q5T2D2 321 aa20.36■□□□□ 0.85
VPS52-215ENST00000464425 C16orf86Q6ZW13 317 aa20.36■□□□□ 0.85
VPS52-215ENST00000464425 TICAM2Q86XR7 235 aa20.36■□□□□ 0.85
VPS52-215ENST00000464425 TLR2O60603 784 aa20.35■□□□□ 0.85
VPS52-215ENST00000464425 GUCY1A2P33402 732 aa20.35■□□□□ 0.85
VPS52-215ENST00000464425 BACE1P56817 501 aa20.35■□□□□ 0.85
VPS52-215ENST00000464425 SEPT2Q15019 361 aa20.35■□□□□ 0.85
VPS52-215ENST00000464425 TTC22Q5TAA0 569 aa20.35■□□□□ 0.85
VPS52-215ENST00000464425 VPS53Q5VIR6 699 aa20.35■□□□□ 0.85
VPS52-215ENST00000464425 GTF3C3Q9Y5Q9 886 aa20.35■□□□□ 0.85
VPS52-215ENST00000464425 USP17L10C9JJH3 530 aa20.34■□□□□ 0.85
VPS52-215ENST00000464425 AKR1B1P15121 316 aa20.34■□□□□ 0.85
VPS52-215ENST00000464425 SP3Q02447 781 aa20.34■□□□□ 0.85
VPS52-215ENST00000464425 SH3D19Q5HYK7 790 aa20.34■□□□□ 0.85
VPS52-215ENST00000464425 PROCA1Q8NCQ7 364 aaPredicted RBP20.34■□□□□ 0.85
VPS52-215ENST00000464425 ACER1Q8TDN7 264 aa20.34■□□□□ 0.85
VPS52-215ENST00000464425 NAPBQ9H115 298 aa20.34■□□□□ 0.85
VPS52-215ENST00000464425 TMOD4Q9NZQ9 345 aa20.34■□□□□ 0.85
VPS52-215ENST00000464425 CPA4Q9UI42 421 aa20.34■□□□□ 0.85
VPS52-215ENST00000464425 AGTPBP1Q9UPW5 1226 aa20.34■□□□□ 0.85
VPS52-215ENST00000464425 C19orf81C9J6K1 198 aa20.33■□□□□ 0.85
VPS52-215ENST00000464425 FOXP2O15409 715 aa20.33■□□□□ 0.85
VPS52-215ENST00000464425 GSPT1P15170 499 aaKnown RBP20.33■□□□□ 0.85
VPS52-215ENST00000464425 ZYXQ15942 572 aaKnown RBP20.33■□□□□ 0.85
VPS52-215ENST00000464425 CWC27Q6UX04 472 aaKnown RBP20.33■□□□□ 0.85
VPS52-215ENST00000464425 CTU1Q7Z7A3 348 aaKnown RBP20.33■□□□□ 0.85
VPS52-215ENST00000464425 ZNF589Q86UQ0 364 aaPredicted RBP20.33■□□□□ 0.85
VPS52-215ENST00000464425 PARK7Q99497 189 aaKnown RBP20.33■□□□□ 0.85
VPS52-215ENST00000464425 MCOLN1Q9GZU1 580 aa20.33■□□□□ 0.85
VPS52-215ENST00000464425 TAOK2Q9UL54 1235 aa20.33■□□□□ 0.85
VPS52-215ENST00000464425 TMEM179Q6ZVK1 233 aa20.32■□□□□ 0.84
VPS52-215ENST00000464425 CD99L2Q8TCZ2 262 aa20.32■□□□□ 0.84
VPS52-215ENST00000464425 FEZ1Q99689 392 aa20.32■□□□□ 0.84
VPS52-215ENST00000464425 MKNK2Q9HBH9 465 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms