RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 SHMT1P34896 483 aa15.64■□□□□ 0.09
XRN1-203ENST00000463916 GABPAQ06546 454 aa15.64■□□□□ 0.09
XRN1-203ENST00000463916 TREML2Q5T2D2 321 aa15.64■□□□□ 0.09
XRN1-203ENST00000463916 SMC5Q8IY18 1101 aa15.64■□□□□ 0.09
XRN1-203ENST00000463916 OSBP2Q969R2 916 aa15.64■□□□□ 0.09
XRN1-203ENST00000463916 ARHGAP39Q9C0H5 1083 aa15.64■□□□□ 0.09
XRN1-203ENST00000463916 ZBTB21Q9ULJ3 1066 aa15.64■□□□□ 0.09
XRN1-203ENST00000463916 NAV1Q8NEY1 1877 aa15.64■□□□□ 0.09
XRN1-203ENST00000463916 GLRX3O76003 335 aaKnown RBP15.64■□□□□ 0.09
XRN1-203ENST00000463916 HMGCS2P54868 508 aa15.64■□□□□ 0.09
XRN1-203ENST00000463916 PKN2Q16513 984 aaKnown RBP15.64■□□□□ 0.09
XRN1-203ENST00000463916 B4GALNT3Q6L9W6 998 aa15.64■□□□□ 0.09
XRN1-203ENST00000463916 ZSCAN25Q6NSZ9 544 aa15.64■□□□□ 0.09
XRN1-203ENST00000463916 ERO1AQ96HE7 468 aa15.64■□□□□ 0.09
XRN1-203ENST00000463916 HPS5Q9UPZ3 1129 aa15.64■□□□□ 0.09
XRN1-203ENST00000463916 CYP2D7A0A087X1C5 515 aa15.63■□□□□ 0.09
XRN1-203ENST00000463916 ERC2O15083 957 aa15.63■□□□□ 0.09
XRN1-203ENST00000463916 ECM2O94769 699 aaPredicted RBP15.63■□□□□ 0.09
XRN1-203ENST00000463916 GH2P01242 217 aa15.63■□□□□ 0.09
XRN1-203ENST00000463916 WDR18Q9BV38 432 aa15.63■□□□□ 0.09
XRN1-203ENST00000463916 LNPKQ9C0E8 428 aa15.63■□□□□ 0.09
XRN1-203ENST00000463916 RWDD1Q9H446 243 aaPredicted RBP15.63■□□□□ 0.09
XRN1-203ENST00000463916 ZSWIM8A7E2V4 1837 aa15.63■□□□□ 0.09
XRN1-203ENST00000463916 RNF113AO15541 343 aaKnown RBP15.63■□□□□ 0.09
XRN1-203ENST00000463916 CTGFP29279 349 aa15.63■□□□□ 0.09
XRN1-203ENST00000463916 FBXO46Q6PJ61 603 aaPredicted RBP15.63■□□□□ 0.09
XRN1-203ENST00000463916 SLC44A5Q8NCS7 719 aa15.63■□□□□ 0.09
XRN1-203ENST00000463916 DYNLL2Q96FJ2 89 aa15.63■□□□□ 0.09
XRN1-203ENST00000463916 STRBPQ96SI9 672 aaKnown RBP15.63■□□□□ 0.09
XRN1-203ENST00000463916 ATP8A2Q9NTI2 1148 aa15.63■□□□□ 0.09
XRN1-203ENST00000463916 STAP2Q9UGK3 403 aa15.63■□□□□ 0.09
XRN1-203ENST00000463916 SLC4A4Q9Y6R1 1079 aa15.63■□□□□ 0.09
XRN1-203ENST00000463916 BAZ2AQ9UIF9 1905 aaKnown RBP15.62■□□□□ 0.09
XRN1-203ENST00000463916 PDE1AP54750 535 aa15.62■□□□□ 0.09
XRN1-203ENST00000463916 MTMR2Q13614 643 aa15.62■□□□□ 0.09
XRN1-203ENST00000463916 CERKLQ49MI3 558 aaPredicted RBP15.62■□□□□ 0.09
XRN1-203ENST00000463916 EFCC1Q9HA90 598 aa15.62■□□□□ 0.09
XRN1-203ENST00000463916 AGTPBP1Q9UPW5 1226 aa15.62■□□□□ 0.09
XRN1-203ENST00000463916 USP17L12C9JPN9 530 aa15.61■□□□□ 0.09
XRN1-203ENST00000463916 USP17L21D6R901 530 aa15.61■□□□□ 0.09
XRN1-203ENST00000463916 BACE1P56817 501 aa15.61■□□□□ 0.09
XRN1-203ENST00000463916 LACTBP83111 547 aaPredicted RBP15.61■□□□□ 0.09
XRN1-203ENST00000463916 SH3D19Q5HYK7 790 aa15.61■□□□□ 0.09
XRN1-203ENST00000463916 APPBP2Q92624 585 aa15.61■□□□□ 0.09
XRN1-203ENST00000463916 SEC62Q99442 399 aaKnown RBP15.61■□□□□ 0.09
XRN1-203ENST00000463916 PARK7Q99497 189 aaKnown RBP15.61■□□□□ 0.09
XRN1-203ENST00000463916 TBC1D2Q9BYX2 928 aa15.61■□□□□ 0.09
XRN1-203ENST00000463916 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
XRN1-203ENST00000463916 M0R2C6 588 aa15.61■□□□□ 0.09
XRN1-203ENST00000463916 GUCY1A2P33402 732 aa15.61■□□□□ 0.09
XRN1-203ENST00000463916 C12orf60Q5U649 245 aa15.61■□□□□ 0.09
XRN1-203ENST00000463916 PROCA1Q8NCQ7 364 aaPredicted RBP15.61■□□□□ 0.09
XRN1-203ENST00000463916 AS3MTQ9HBK9 375 aa15.61■□□□□ 0.09
XRN1-203ENST00000463916 SLC45A1Q9Y2W3 748 aa15.61■□□□□ 0.09
XRN1-203ENST00000463916 GSG1L2A8MUP6 293 aa15.6■□□□□ 0.09
XRN1-203ENST00000463916 BCRP11274 1271 aa15.6■□□□□ 0.09
XRN1-203ENST00000463916 ABCB5Q2M3G0 1257 aa15.6■□□□□ 0.09
XRN1-203ENST00000463916 CTR9Q6PD62 1173 aa15.6■□□□□ 0.09
XRN1-203ENST00000463916 GINM1Q9NU53 330 aa15.6■□□□□ 0.09
XRN1-203ENST00000463916 PTPN22Q9Y2R2 807 aa15.6■□□□□ 0.09
XRN1-203ENST00000463916 LOC285556D6RIA3 1793 aa15.6■□□□□ 0.09
XRN1-203ENST00000463916 ZFYP08048 801 aaPredicted RBP15.59■□□□□ 0.09
XRN1-203ENST00000463916 RAB3GAP1Q15042 981 aa15.59■□□□□ 0.09
XRN1-203ENST00000463916 FSD1Q9BTV5 496 aa15.59■□□□□ 0.09
XRN1-203ENST00000463916 MKI67P46013 3256 aaKnown RBP15.59■□□□□ 0.09
XRN1-203ENST00000463916 USP17L10C9JJH3 530 aa15.59■□□□□ 0.09
XRN1-203ENST00000463916 GPAA1O43292 621 aa15.59■□□□□ 0.09
XRN1-203ENST00000463916 NUCB1Q02818 461 aa15.59■□□□□ 0.09
XRN1-203ENST00000463916 CHD1LQ86WJ1 897 aa15.59■□□□□ 0.09
XRN1-203ENST00000463916 ACER1Q8TDN7 264 aa15.59■□□□□ 0.09
XRN1-203ENST00000463916 TRIM47Q96LD4 638 aa15.58■□□□□ 0.09
XRN1-203ENST00000463916 EMILIN3Q9NT22 766 aa15.58■□□□□ 0.09
XRN1-203ENST00000463916 TNRC18O15417 2968 aaPredicted RBP15.58■□□□□ 0.08
XRN1-203ENST00000463916 SEPT2Q15019 361 aa15.58■□□□□ 0.08
XRN1-203ENST00000463916 SMCR8Q8TEV9 937 aaPredicted RBP15.58■□□□□ 0.08
XRN1-203ENST00000463916 ASCC2Q9H1I8 757 aaPredicted RBP15.58■□□□□ 0.08
XRN1-203ENST00000463916 EPB41L4AQ9HCS5 686 aaPredicted RBP15.58■□□□□ 0.08
XRN1-203ENST00000463916 C19orf81C9J6K1 198 aa15.57■□□□□ 0.08
XRN1-203ENST00000463916 PSMC4P43686 418 aa15.57■□□□□ 0.08
XRN1-203ENST00000463916 CDK8P49336 464 aa15.57■□□□□ 0.08
XRN1-203ENST00000463916 ZMYM1Q5SVZ6 1142 aa15.57■□□□□ 0.08
XRN1-203ENST00000463916 SOX10P56693 466 aa15.56■□□□□ 0.08
XRN1-203ENST00000463916 ZYXQ15942 572 aaKnown RBP15.56■□□□□ 0.08
XRN1-203ENST00000463916 PLEKHM2Q8IWE5 1019 aa15.56■□□□□ 0.08
XRN1-203ENST00000463916 ANKRD13CQ8N6S4 541 aa15.56■□□□□ 0.08
XRN1-203ENST00000463916 CABP5Q9NP86 173 aa15.56■□□□□ 0.08
XRN1-203ENST00000463916 TMOD4Q9NZQ9 345 aa15.56■□□□□ 0.08
XRN1-203ENST00000463916 SWAP70Q9UH65 585 aa15.56■□□□□ 0.08
XRN1-203ENST00000463916 PTCH2Q9Y6C5 1203 aa15.56■□□□□ 0.08
XRN1-203ENST00000463916 A0A1W2PRG0 241 aa15.56■□□□□ 0.08
XRN1-203ENST00000463916 MPHOSPH10O00566 681 aaKnown RBP15.56■□□□□ 0.08
XRN1-203ENST00000463916 PEX10O60683 326 aa15.56■□□□□ 0.08
XRN1-203ENST00000463916 AKR1B1P15121 316 aa15.56■□□□□ 0.08
XRN1-203ENST00000463916 KIF22Q14807 665 aa15.56■□□□□ 0.08
XRN1-203ENST00000463916 C16orf86Q6ZW13 317 aa15.56■□□□□ 0.08
XRN1-203ENST00000463916 CLEC10AQ8IUN9 316 aa15.56■□□□□ 0.08
XRN1-203ENST00000463916 SIAH1Q8IUQ4 282 aa15.56■□□□□ 0.08
XRN1-203ENST00000463916 EVI5LQ96CN4 794 aa15.56■□□□□ 0.08
XRN1-203ENST00000463916 DDRGK1Q96HY6 314 aa15.56■□□□□ 0.08
XRN1-203ENST00000463916 HOXA7P31268 230 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms