RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 INCENPQ9NQS7 918 aa14.37□□□□□ -0.11
NUP58-206ENST00000463407 KRT83P78385 493 aa14.37□□□□□ -0.11
NUP58-206ENST00000463407 IFNL3Q8IZI9 196 aa14.37□□□□□ -0.11
NUP58-206ENST00000463407 DDX12PQ92771 950 aa14.37□□□□□ -0.11
NUP58-206ENST00000463407 KIFAP3Q92845 792 aa14.37□□□□□ -0.11
NUP58-206ENST00000463407 ZSCAN10Q96SZ4 725 aaPredicted RBP14.36□□□□□ -0.11
NUP58-206ENST00000463407 MAK16Q9BXY0 300 aaKnown RBP14.36□□□□□ -0.11
NUP58-206ENST00000463407 KCNJ14Q9UNX9 436 aa14.36□□□□□ -0.11
NUP58-206ENST00000463407 STX10O60499 249 aa14.36□□□□□ -0.11
NUP58-206ENST00000463407 ARL1P40616 181 aaPredicted RBP14.36□□□□□ -0.11
NUP58-206ENST00000463407 GNPTABQ3T906 1256 aa14.36□□□□□ -0.11
NUP58-206ENST00000463407 AFF2P51816 1311 aa14.36□□□□□ -0.11
NUP58-206ENST00000463407 SMCO2A6NFE2 343 aa14.36□□□□□ -0.11
NUP58-206ENST00000463407 POLR3GO15318 223 aaPredicted RBP14.36□□□□□ -0.11
NUP58-206ENST00000463407 PPP1R14CQ8TAE6 165 aa14.36□□□□□ -0.11
NUP58-206ENST00000463407 ARAP3Q8WWN8 1544 aa14.36□□□□□ -0.11
NUP58-206ENST00000463407 USP44Q9H0E7 712 aa14.36□□□□□ -0.11
NUP58-206ENST00000463407 IFNKQ9P0W0 207 aa14.36□□□□□ -0.11
NUP58-206ENST00000463407 AATKQ6ZMQ8 1374 aa14.36□□□□□ -0.11
NUP58-206ENST00000463407 CCDC175P0C221 793 aa14.36□□□□□ -0.11
NUP58-206ENST00000463407 ICA1Q05084 483 aa14.36□□□□□ -0.11
NUP58-206ENST00000463407 FAM160A1Q05DH4 1040 aa14.36□□□□□ -0.11
NUP58-206ENST00000463407 METTL13Q8N6R0 699 aa14.36□□□□□ -0.11
NUP58-206ENST00000463407 NOC4LQ9BVI4 516 aaKnown RBP14.36□□□□□ -0.11
NUP58-206ENST00000463407 ANKARQ7Z5J8 1434 aa14.36□□□□□ -0.11
NUP58-206ENST00000463407 KRT9P35527 623 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 PROSER3Q2NL68 480 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 ANKRD35Q8N283 1001 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 TBC1D7Q9P0N9 293 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 FLOT1O75955 427 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 PPP1R2P41236 205 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 GRIPAP1Q4V328 841 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 GOLGA1Q92805 767 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 DNAI1Q9UI46 699 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 PDE6AP16499 860 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 VPS54Q9P1Q0 977 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 KDM2BQ8NHM5 1336 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 FERP16591 822 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 KIF5AQ12840 1032 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 ABCB5Q2M3G0 1257 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 TPH2Q8IWU9 490 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 BBXQ8WY36 941 aaPredicted RBP14.35□□□□□ -0.11
NUP58-206ENST00000463407 MRPL11Q9Y3B7 192 aaKnown RBP14.35□□□□□ -0.11
NUP58-206ENST00000463407 MIER3Q7Z3K6 550 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 TMC4Q7Z404 712 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 REXO1Q8N1G1 1221 aaKnown RBP14.35□□□□□ -0.11
NUP58-206ENST00000463407 SRP68Q9UHB9 627 aaKnown RBP14.35□□□□□ -0.11
NUP58-206ENST00000463407 TRPC6Q9Y210 931 aa14.35□□□□□ -0.11
NUP58-206ENST00000463407 RFX1P22670 979 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 CCDC93Q567U6 631 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 OTUD6AQ7L8S5 288 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 DYMQ7RTS9 669 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 PLEKHF1Q96S99 279 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
NUP58-206ENST00000463407 BBOX1O75936 387 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 CBX1P83916 185 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 CTAGE15A4D2H0 777 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 POLR2MP0CAP2 368 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 CTAGE8P0CG41 777 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 RAD51AP2Q09MP3 1159 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 CTAGE6Q86UF2 777 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 CTAGE4Q8IX94 777 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 KCNH3Q9ULD8 1083 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 GAS7O60861 476 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 HSF2BPO75031 334 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 KRT19P08727 400 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 PUS3Q9BZE2 481 aaKnown RBP14.34□□□□□ -0.11
NUP58-206ENST00000463407 CLASP1Q7Z460 1538 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 POLR2DO15514 142 aaKnown RBP14.34□□□□□ -0.11
NUP58-206ENST00000463407 SEC31BQ9NQW1 1179 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 MAPK8IP1Q9UQF2 711 aa14.34□□□□□ -0.11
NUP58-206ENST00000463407 A0A1W2PRG0 241 aa14.33□□□□□ -0.11
NUP58-206ENST00000463407 RAD17O75943 681 aa14.33□□□□□ -0.11
NUP58-206ENST00000463407 PIGBQ92521 554 aa14.33□□□□□ -0.11
NUP58-206ENST00000463407 PRAMEF22A3QJZ6 481 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 CTAGE9A4FU28 777 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 GCNT3O95395 438 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 ZNF654Q8IZM8 581 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 CCDC155Q8N6L0 562 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 ATP8A2Q9NTI2 1148 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 ATP6V0A2Q9Y487 856 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 ERBB3P21860 1342 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 IGSF1Q8N6C5 1336 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 KRT86O43790 486 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 PDE8BO95263 885 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 PHKA1P46020 1223 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 CABP7Q86V35 215 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 SREK1Q8WXA9 508 aaKnown RBP14.33□□□□□ -0.12
NUP58-206ENST00000463407 PSTPIP2Q9H939 334 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 OSBPP22059 807 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 KRT40Q6A162 431 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 MCF2L2Q86YR7 1114 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 FMNL3Q8IVF7 1028 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 CMTR1Q8N1G2 835 aaKnown RBP14.33□□□□□ -0.12
NUP58-206ENST00000463407 MRPL44Q9H9J2 332 aaKnown RBP14.33□□□□□ -0.12
NUP58-206ENST00000463407 ARMC9Q7Z3E5 817 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 HACE1Q8IYU2 909 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 SSH3Q8TE77 659 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 CSRNP1Q96S65 589 aa14.33□□□□□ -0.12
NUP58-206ENST00000463407 HERC4Q5GLZ8 1057 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms