RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 ELOA3BQ3SY89 546 aa7.84□□□□□ -1.15
COPS3-205ENST00000463097 BBS9Q3SYG4 887 aa7.84□□□□□ -1.15
COPS3-205ENST00000463097 SV2CQ496J9 727 aa7.84□□□□□ -1.15
COPS3-205ENST00000463097 ELOA3Q8NG57 546 aa7.84□□□□□ -1.15
COPS3-205ENST00000463097 NUDT8Q8WV74 236 aa7.84□□□□□ -1.15
COPS3-205ENST00000463097 EXOC2Q96KP1 924 aa7.84□□□□□ -1.15
COPS3-205ENST00000463097 CDC6Q99741 560 aa7.84□□□□□ -1.15
COPS3-205ENST00000463097 MCM8Q9UJA3 840 aa7.84□□□□□ -1.15
COPS3-205ENST00000463097 THRAP3Q9Y2W1 955 aaKnown RBP7.84□□□□□ -1.15
COPS3-205ENST00000463097 CCDC194A0A1B0GVG4 234 aa7.83□□□□□ -1.16
COPS3-205ENST00000463097 A0A1W2PQU0 124 aa7.83□□□□□ -1.16
COPS3-205ENST00000463097 ALG1L2C9J202 215 aa7.83□□□□□ -1.16
COPS3-205ENST00000463097 FSCN2O14926 492 aa7.83□□□□□ -1.16
COPS3-205ENST00000463097 RAPGEF3O95398 923 aa7.83□□□□□ -1.16
COPS3-205ENST00000463097 CTSBP07858 339 aa7.83□□□□□ -1.16
COPS3-205ENST00000463097 MX2P20592 715 aa7.83□□□□□ -1.16
COPS3-205ENST00000463097 BAG6P46379 1132 aa7.83□□□□□ -1.16
COPS3-205ENST00000463097 ZNF143P52747 638 aaPredicted RBP7.83□□□□□ -1.16
COPS3-205ENST00000463097 FNDC3BQ53EP0 1204 aaKnown RBP7.83□□□□□ -1.16
COPS3-205ENST00000463097 ZC3H12AQ5D1E8 599 aaKnown RBP7.83□□□□□ -1.16
COPS3-205ENST00000463097 FCHSD1Q86WN1 690 aa7.83□□□□□ -1.16
COPS3-205ENST00000463097 UBR7Q8N806 425 aa7.83□□□□□ -1.16
COPS3-205ENST00000463097 ACSF2Q96CM8 615 aaPredicted RBP7.83□□□□□ -1.16
COPS3-205ENST00000463097 DHRS1Q96LJ7 313 aa7.83□□□□□ -1.16
COPS3-205ENST00000463097 IPO9Q96P70 1041 aaKnown RBP7.83□□□□□ -1.16
COPS3-205ENST00000463097 RUSC1Q9BVN2 902 aa7.83□□□□□ -1.16
COPS3-205ENST00000463097 CSADQ9Y600 493 aa7.83□□□□□ -1.16
COPS3-205ENST00000463097 TRAV20A0A0B4J274 112 aa7.82□□□□□ -1.16
COPS3-205ENST00000463097 NEURL1BA8MQ27 555 aa7.82□□□□□ -1.16
COPS3-205ENST00000463097 NRG2O14511 850 aaPredicted RBP7.82□□□□□ -1.16
COPS3-205ENST00000463097 GFRA3O60609 400 aa7.82□□□□□ -1.16
COPS3-205ENST00000463097 NAT2P11245 290 aa7.82□□□□□ -1.16
COPS3-205ENST00000463097 PMLP29590 882 aa7.82□□□□□ -1.16
COPS3-205ENST00000463097 POLR2BP30876 1174 aaKnown RBP7.82□□□□□ -1.16
COPS3-205ENST00000463097 CCNFP41002 786 aa7.82□□□□□ -1.16
COPS3-205ENST00000463097 ETF1P62495 437 aaKnown RBP7.82□□□□□ -1.16
COPS3-205ENST00000463097 FAM209AQ5JX71 171 aa7.82□□□□□ -1.16
COPS3-205ENST00000463097 RNF180Q86T96 592 aa7.82□□□□□ -1.16
COPS3-205ENST00000463097 CLUHP3Q96NS8 147 aa7.82□□□□□ -1.16
COPS3-205ENST00000463097 WNT10AQ9GZT5 417 aa7.82□□□□□ -1.16
COPS3-205ENST00000463097 ARHGEF4Q9NR80 690 aa7.82□□□□□ -1.16
COPS3-205ENST00000463097 TCEAL9Q9UHQ7 104 aa7.82□□□□□ -1.16
COPS3-205ENST00000463097 MAPRE3Q9UPY8 281 aa7.82□□□□□ -1.16
COPS3-205ENST00000463097 MRPS23Q9Y3D9 190 aaKnown RBP7.82□□□□□ -1.16
COPS3-205ENST00000463097 EID1Q9Y6B2 187 aa7.82□□□□□ -1.16
COPS3-205ENST00000463097 TRBV23-1A0A0A0MS06 115 aa7.81□□□□□ -1.16
COPS3-205ENST00000463097 ANKRD34BA5PLL1 514 aa7.81□□□□□ -1.16
COPS3-205ENST00000463097 PLEKHD1A6NEE1 506 aa7.81□□□□□ -1.16
COPS3-205ENST00000463097 GSG1L2A8MUP6 293 aa7.81□□□□□ -1.16
COPS3-205ENST00000463097 EIF5BO60841 1220 aaKnown RBP7.81□□□□□ -1.16
COPS3-205ENST00000463097 PPFIA3O75145 1194 aa7.81□□□□□ -1.16
COPS3-205ENST00000463097 SLFN14P0C7P3 912 aa7.81□□□□□ -1.16
COPS3-205ENST00000463097 ALAS2P22557 587 aa7.81□□□□□ -1.16
COPS3-205ENST00000463097 PMS1P54277 932 aaKnown RBP7.81□□□□□ -1.16
COPS3-205ENST00000463097 YARSP54577 528 aaKnown RBP7.81□□□□□ -1.16
COPS3-205ENST00000463097 RING1Q06587 406 aa7.81□□□□□ -1.16
COPS3-205ENST00000463097 HSP90AA2PQ14568 343 aaPredicted RBP7.81□□□□□ -1.16
COPS3-205ENST00000463097 AKAP4Q5JQC9 854 aa7.81□□□□□ -1.16
COPS3-205ENST00000463097 MCATQ8IVS2 390 aaKnown RBP7.81□□□□□ -1.16
COPS3-205ENST00000463097 SCUBE1Q8IWY4 988 aa7.81□□□□□ -1.16
COPS3-205ENST00000463097 FAM13CQ8NE31 585 aa7.81□□□□□ -1.16
COPS3-205ENST00000463097 NANOS1Q8WY41 292 aaKnown RBP7.81□□□□□ -1.16
COPS3-205ENST00000463097 TRIM47Q96LD4 638 aa7.81□□□□□ -1.16
COPS3-205ENST00000463097 APBA2Q99767 749 aa7.81□□□□□ -1.16
COPS3-205ENST00000463097 GABBR1Q9UBS5 961 aa7.81□□□□□ -1.16
COPS3-205ENST00000463097 RIPOR2Q9Y4F9 1068 aa7.81□□□□□ -1.16
COPS3-205ENST00000463097 FAM50AQ14320 339 aaKnown RBP7.8□□□□□ -1.16
COPS3-205ENST00000463097 HP1BP3Q5SSJ5 553 aaPredicted RBP7.8□□□□□ -1.16
COPS3-205ENST00000463097 YOD1Q5VVQ6 348 aaPredicted RBP7.8□□□□□ -1.16
COPS3-205ENST00000463097 TMEM192Q8IY95 271 aa7.8□□□□□ -1.16
COPS3-205ENST00000463097 SLFN12Q8IYM2 578 aa7.8□□□□□ -1.16
COPS3-205ENST00000463097 PHACTR4Q8IZ21 702 aa7.8□□□□□ -1.16
COPS3-205ENST00000463097 KLHDC7BQ96G42 594 aa7.8□□□□□ -1.16
COPS3-205ENST00000463097 CCDC136Q96JN2 1154 aa7.8□□□□□ -1.16
COPS3-205ENST00000463097 SLC6A18Q96N87 628 aa7.8□□□□□ -1.16
COPS3-205ENST00000463097 PSMD1Q99460 953 aa7.8□□□□□ -1.16
COPS3-205ENST00000463097 AARSD1Q9BTE6 412 aaKnown RBP7.8□□□□□ -1.16
COPS3-205ENST00000463097 CARD10Q9BWT7 1032 aa7.8□□□□□ -1.16
COPS3-205ENST00000463097 JPH1Q9HDC5 661 aaPredicted RBP7.8□□□□□ -1.16
COPS3-205ENST00000463097 GEMIN8Q9NWZ8 242 aaKnown RBP7.8□□□□□ -1.16
COPS3-205ENST00000463097 TJP2Q9UDY2 1190 aa7.8□□□□□ -1.16
COPS3-205ENST00000463097 SUSD2Q9UGT4 822 aa7.8□□□□□ -1.16
COPS3-205ENST00000463097 HIF3AQ9Y2N7 669 aa7.8□□□□□ -1.16
COPS3-205ENST00000463097 TPD52L2O43399 206 aaKnown RBP7.79□□□□□ -1.16
COPS3-205ENST00000463097 SUZ12Q15022 739 aaKnown RBP7.79□□□□□ -1.16
COPS3-205ENST00000463097 C20orf204Q6ZNR8 217 aa7.79□□□□□ -1.16
COPS3-205ENST00000463097 PPFIBP1Q86W92 1011 aa7.79□□□□□ -1.16
COPS3-205ENST00000463097 KLHL23Q8NBE8 558 aa7.79□□□□□ -1.16
COPS3-205ENST00000463097 ATL2Q8NHH9 583 aa7.79□□□□□ -1.16
COPS3-205ENST00000463097 WDR18Q9BV38 432 aa7.79□□□□□ -1.16
COPS3-205ENST00000463097 TARS2Q9BW92 718 aaKnown RBP7.79□□□□□ -1.16
COPS3-205ENST00000463097 USP26Q9BXU7 913 aa7.79□□□□□ -1.16
COPS3-205ENST00000463097 MRPL4Q9BYD3 311 aaKnown RBP7.79□□□□□ -1.16
COPS3-205ENST00000463097 INTS7Q9NVH2 962 aaKnown RBP7.79□□□□□ -1.16
COPS3-205ENST00000463097 FAM86C1Q9NVL1 165 aa7.79□□□□□ -1.16
COPS3-205ENST00000463097 LRP2BPQ9P2M1 347 aa7.79□□□□□ -1.16
COPS3-205ENST00000463097 MAGEC2Q9UBF1 373 aaPredicted RBP7.79□□□□□ -1.16
COPS3-205ENST00000463097 SUCOQ9UBS9 1254 aaKnown RBP7.79□□□□□ -1.16
COPS3-205ENST00000463097 STARD13Q9Y3M8 1113 aa7.79□□□□□ -1.16
COPS3-205ENST00000463097 PCDHGC5Q9Y5F6 944 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms