RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 OSGEPQ9NPF4 335 aa5.26□□□□□ -1.57
GPNMB-205ENST00000463011 TYW1Q9NV66 732 aaKnown RBP5.26□□□□□ -1.57
GPNMB-205ENST00000463011 FAM86C1Q9NVL1 165 aa5.26□□□□□ -1.57
GPNMB-205ENST00000463011 SLC52A1Q9NWF4 448 aa5.26□□□□□ -1.57
GPNMB-205ENST00000463011 GGA1Q9UJY5 639 aa5.26□□□□□ -1.57
GPNMB-205ENST00000463011 ZNF214Q9UL59 606 aaPredicted RBP5.26□□□□□ -1.57
GPNMB-205ENST00000463011 ATP8A1Q9Y2Q0 1164 aa5.26□□□□□ -1.57
GPNMB-205ENST00000463011 STARD13Q9Y3M8 1113 aa5.26□□□□□ -1.57
GPNMB-205ENST00000463011 CCDC163A0A0D9SF12 145 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 RAPGEF3O95398 923 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 TP53P04637 393 aaPredicted RBP5.25□□□□□ -1.57
GPNMB-205ENST00000463011 SLFN14P0C7P3 912 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 AFF1P51825 1210 aaKnown RBP5.25□□□□□ -1.57
GPNMB-205ENST00000463011 NLRP12P59046 1061 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 GAS6Q14393 721 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 KIF4BQ2VIQ3 1234 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 HSP90AB2PQ58FF8 381 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 ZC3H12AQ5D1E8 599 aaKnown RBP5.25□□□□□ -1.57
GPNMB-205ENST00000463011 ZC3H12BQ5HYM0 836 aaKnown RBP5.25□□□□□ -1.57
GPNMB-205ENST00000463011 CT47A1Q5JQC4 288 aaPredicted RBP5.25□□□□□ -1.57
GPNMB-205ENST00000463011 FAM209AQ5JX71 171 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 DDX42Q86XP3 938 aaKnown RBP eCLIP5.25□□□□□ -1.57
GPNMB-205ENST00000463011 THNSL2Q86YJ6 484 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 FMNL3Q8IVF7 1028 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 FAM13CQ8NE31 585 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 NANOS1Q8WY41 292 aaKnown RBP5.25□□□□□ -1.57
GPNMB-205ENST00000463011 CDC6Q99741 560 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 WNT10AQ9GZT5 417 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 PICK1Q9NRD5 415 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 ADAM30Q9UKF2 790 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 FAN1Q9Y2M0 1017 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 HIF3AQ9Y2N7 669 aa5.25□□□□□ -1.57
GPNMB-205ENST00000463011 A0A087X0B3 334 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 A0A1W2PQU0 124 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 AGRPO00253 132 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 DDX3YO15523 660 aaKnown RBP5.24□□□□□ -1.57
GPNMB-205ENST00000463011 ALBP02768 609 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 POU3F3P20264 500 aaPredicted RBP5.24□□□□□ -1.57
GPNMB-205ENST00000463011 STAT3P40763 770 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 MAP2K3P46734 347 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 HNRNPUQ00839 825 aaKnown RBP eCLIP5.24□□□□□ -1.57
GPNMB-205ENST00000463011 PPM1JQ5JR12 505 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 ODR4Q5SWX8 454 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 C20orf204Q6ZNR8 217 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 C8orf86Q6ZUL3 223 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 WFDC8Q8IUA0 241 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 PHACTR4Q8IZ21 702 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 SGSM3Q96HU1 749 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 EXOC2Q96KP1 924 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 IPO9Q96P70 1041 aaKnown RBP5.24□□□□□ -1.57
GPNMB-205ENST00000463011 CEP89Q96ST8 783 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 KIF2CQ99661 725 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 APBA2Q99767 749 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 DHRS4Q9BTZ2 278 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 CAAP1Q9H8G2 361 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 LRP2BPQ9P2M1 347 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 TJP2Q9UDY2 1190 aa5.24□□□□□ -1.57
GPNMB-205ENST00000463011 NSFL1CQ9UNZ2 370 aaKnown RBP5.24□□□□□ -1.57
GPNMB-205ENST00000463011 KCNQ2O43526 872 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 PDE8AO60658 829 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 AOC2O75106 756 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 RFPL3O75679 317 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 DLGAP3O95886 979 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 CCNFP41002 786 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 NFKB2Q00653 900 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 FAM50AQ14320 339 aaKnown RBP5.23□□□□□ -1.57
GPNMB-205ENST00000463011 BRDTQ58F21 947 aaPredicted RBP5.23□□□□□ -1.57
GPNMB-205ENST00000463011 YOD1Q5VVQ6 348 aaPredicted RBP5.23□□□□□ -1.57
GPNMB-205ENST00000463011 TDRD10Q5VZ19 366 aaKnown RBP5.23□□□□□ -1.57
GPNMB-205ENST00000463011 PPFIBP1Q86W92 1011 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 TMEM192Q8IY95 271 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 KLHL23Q8NBE8 558 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 GALNT11Q8NCW6 608 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 KISS1RQ969F8 398 aaPredicted RBP5.23□□□□□ -1.57
GPNMB-205ENST00000463011 PPP1R14AQ96A00 147 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 DHRS1Q96LJ7 313 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 SLC6A18Q96N87 628 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 CLUHP3Q96NS8 147 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 WDR18Q9BV38 432 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 NCOA5Q9HCD5 579 aaKnown RBP5.23□□□□□ -1.57
GPNMB-205ENST00000463011 ARHGEF4Q9NR80 690 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 RAD18Q9NS91 495 aa5.23□□□□□ -1.57
GPNMB-205ENST00000463011 TRBV23-1A0A0A0MS06 115 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 TRAV20A0A0B4J274 112 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 LOC100289279A0A1B0GTE1 492 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 ANKRD34BA5PLL1 514 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 PLD2O14939 933 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 LILRB5O75023 590 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 MAP4K4O95819 1239 aaPredicted RBP5.22□□□□□ -1.57
GPNMB-205ENST00000463011 GBP1P32455 592 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 SOX5P35711 763 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 PMS1P54277 932 aaKnown RBP5.22□□□□□ -1.57
GPNMB-205ENST00000463011 YARSP54577 528 aaKnown RBP5.22□□□□□ -1.57
GPNMB-205ENST00000463011 RING1Q06587 406 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 HSP90AA2PQ14568 343 aaPredicted RBP5.22□□□□□ -1.57
GPNMB-205ENST00000463011 BBS9Q3SYG4 887 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 AXDND1Q5T1B0 1012 aaPredicted RBP5.22□□□□□ -1.57
GPNMB-205ENST00000463011 MSL1Q68DK7 614 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 CNNM4Q6P4Q7 775 aa5.22□□□□□ -1.57
GPNMB-205ENST00000463011 CERS3Q8IU89 383 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms