RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 LRSAM1Q6UWE0 723 aa16.84■□□□□ 0.29
HDAC6-213ENST00000462730 MAPKAPK5Q8IW41 473 aa16.84■□□□□ 0.29
HDAC6-213ENST00000462730 ENAHQ8N8S7 591 aaPredicted RBP16.84■□□□□ 0.29
HDAC6-213ENST00000462730 PSMD1Q99460 953 aa16.84■□□□□ 0.29
HDAC6-213ENST00000462730 PPP1R1BQ9UD71 204 aaPredicted RBP16.84■□□□□ 0.29
HDAC6-213ENST00000462730 CFAP45Q9UL16 551 aa16.84■□□□□ 0.29
HDAC6-213ENST00000462730 PSME4Q14997 1843 aa16.84■□□□□ 0.29
HDAC6-213ENST00000462730 SCNN1DP51172 638 aa16.84■□□□□ 0.29
HDAC6-213ENST00000462730 RCAN1P53805 252 aa16.84■□□□□ 0.29
HDAC6-213ENST00000462730 DACT2Q5SW24 774 aa16.84■□□□□ 0.29
HDAC6-213ENST00000462730 IQCA1Q86XH1 822 aa16.84■□□□□ 0.29
HDAC6-213ENST00000462730 NUP133Q8WUM0 1156 aa16.84■□□□□ 0.29
HDAC6-213ENST00000462730 ZNF396Q96N95 335 aaPredicted RBP16.84■□□□□ 0.29
HDAC6-213ENST00000462730 AIFM3Q96NN9 605 aa16.84■□□□□ 0.29
HDAC6-213ENST00000462730 PPP1R9BQ96SB3 815 aa16.84■□□□□ 0.29
HDAC6-213ENST00000462730 SGIP1Q9BQI5 828 aa16.84■□□□□ 0.29
HDAC6-213ENST00000462730 GJB4Q9NTQ9 266 aa16.84■□□□□ 0.29
HDAC6-213ENST00000462730 PIM2Q9P1W9 311 aa16.84■□□□□ 0.29
HDAC6-213ENST00000462730 FLT1P17948 1338 aa16.83■□□□□ 0.29
HDAC6-213ENST00000462730 STK36Q9NRP7 1315 aa16.83■□□□□ 0.29
HDAC6-213ENST00000462730 ROBO3Q96MS0 1386 aa16.83■□□□□ 0.29
HDAC6-213ENST00000462730 COL4A5P29400 1685 aa16.83■□□□□ 0.28
HDAC6-213ENST00000462730 PDE4BQ07343 736 aa16.83■□□□□ 0.28
HDAC6-213ENST00000462730 SSRP1Q08945 709 aaKnown RBP16.83■□□□□ 0.28
HDAC6-213ENST00000462730 C12orf60Q5U649 245 aa16.83■□□□□ 0.28
HDAC6-213ENST00000462730 SLC26A6Q9BXS9 759 aa16.83■□□□□ 0.28
HDAC6-213ENST00000462730 USP17L3A6NCW0 530 aa16.82■□□□□ 0.28
HDAC6-213ENST00000462730 USP17L4A6NCW7 530 aa16.82■□□□□ 0.28
HDAC6-213ENST00000462730 GOLGA6L4A6NEF3 574 aa16.82■□□□□ 0.28
HDAC6-213ENST00000462730 RRP9O43818 475 aaKnown RBP16.82■□□□□ 0.28
HDAC6-213ENST00000462730 FMNL1O95466 1100 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-213ENST00000462730 IFNAR1P17181 557 aa16.82■□□□□ 0.28
HDAC6-213ENST00000462730 FKBP1AP62942 108 aaKnown RBP16.82■□□□□ 0.28
HDAC6-213ENST00000462730 CEBPZQ03701 1054 aaKnown RBP16.82■□□□□ 0.28
HDAC6-213ENST00000462730 FAM47AQ5JRC9 791 aa16.82■□□□□ 0.28
HDAC6-213ENST00000462730 IFIT1BQ5T764 474 aaKnown RBP16.82■□□□□ 0.28
HDAC6-213ENST00000462730 USP17L1Q7RTZ2 530 aa16.82■□□□□ 0.28
HDAC6-213ENST00000462730 AMOTL1Q8IY63 956 aa16.82■□□□□ 0.28
HDAC6-213ENST00000462730 KLHL34Q8N239 644 aa16.82■□□□□ 0.28
HDAC6-213ENST00000462730 MYH1P12882 1939 aa16.82■□□□□ 0.28
HDAC6-213ENST00000462730 YDJCA8MPS7 323 aa16.82■□□□□ 0.28
HDAC6-213ENST00000462730 ATL3Q6DD88 541 aa16.82■□□□□ 0.28
HDAC6-213ENST00000462730 KIAA0825Q8IV33 1275 aa16.82■□□□□ 0.28
HDAC6-213ENST00000462730 RGS22Q8NE09 1264 aa16.82■□□□□ 0.28
HDAC6-213ENST00000462730 TEKT1Q969V4 418 aa16.82■□□□□ 0.28
HDAC6-213ENST00000462730 FTOQ9C0B1 505 aaKnown RBP eCLIP16.82■□□□□ 0.28
HDAC6-213ENST00000462730 ZNF277Q9NRM2 450 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-213ENST00000462730 SAP30BPQ9UHR5 308 aaKnown RBP16.82■□□□□ 0.28
HDAC6-213ENST00000462730 TAOK2Q9UL54 1235 aa16.82■□□□□ 0.28
HDAC6-213ENST00000462730 CCDC196A0A1B0GTZ2 297 aa16.81■□□□□ 0.28
HDAC6-213ENST00000462730 SOGA3Q5TF21 947 aa16.81■□□□□ 0.28
HDAC6-213ENST00000462730 CATIPQ7Z7H3 387 aa16.81■□□□□ 0.28
HDAC6-213ENST00000462730 FANCBQ8NB91 859 aa16.81■□□□□ 0.28
HDAC6-213ENST00000462730 ANP32BQ92688 251 aaKnown RBP16.81■□□□□ 0.28
HDAC6-213ENST00000462730 USP28Q96RU2 1077 aa16.81■□□□□ 0.28
HDAC6-213ENST00000462730 KIF23Q02241 960 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-213ENST00000462730 DALRD3Q5D0E6 543 aaKnown RBP16.8■□□□□ 0.28
HDAC6-213ENST00000462730 KRT40Q6A162 431 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 HHIPL2Q6UWX4 724 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 DYNLL2Q96FJ2 89 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 FER1L6Q2WGJ9 1857 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 TSPY2A6NKD2 308 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 KIF28PB7ZC32 967 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 NMT2O60551 498 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 POLR3DP05423 398 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-213ENST00000462730 LIG1P18858 919 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 PTGER2P43116 358 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 CRKP46108 304 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 PLCD1P51178 756 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 BRAPQ7Z569 592 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 TRIM22Q8IYM9 498 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 LARGE2Q8N3Y3 721 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 WASF1Q92558 559 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 PGBD1Q96JS3 809 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 RBSNQ9H1K0 784 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 RCOR1Q9UKL0 485 aa16.8■□□□□ 0.28
HDAC6-213ENST00000462730 UBE2Q2LH0YL09 131 aa16.79■□□□□ 0.28
HDAC6-213ENST00000462730 PICALMQ13492 652 aa16.79■□□□□ 0.28
HDAC6-213ENST00000462730 TRIM29Q14134 588 aa16.79■□□□□ 0.28
HDAC6-213ENST00000462730 TSPY26PQ9H489 355 aa16.79■□□□□ 0.28
HDAC6-213ENST00000462730 LETM1O95202 739 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-213ENST00000462730 APOBEC3HQ6NTF7 200 aaKnown RBP16.78■□□□□ 0.28
HDAC6-213ENST00000462730 NBPF11Q86T75 865 aa16.78■□□□□ 0.28
HDAC6-213ENST00000462730 CMTR1Q8N1G2 835 aaKnown RBP16.78■□□□□ 0.28
HDAC6-213ENST00000462730 CRACR2BQ8N4Y2 399 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-213ENST00000462730 BICD2Q8TD16 824 aa16.78■□□□□ 0.28
HDAC6-213ENST00000462730 CD2APQ9Y5K6 639 aa16.78■□□□□ 0.28
HDAC6-213ENST00000462730 WDHD1O75717 1129 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-213ENST00000462730 DDAH1O94760 285 aa16.78■□□□□ 0.28
HDAC6-213ENST00000462730 CALM1P0DP23 149 aa16.78■□□□□ 0.28
HDAC6-213ENST00000462730 CALM2P0DP24 149 aa16.78■□□□□ 0.28
HDAC6-213ENST00000462730 CALM3P0DP25 149 aa16.78■□□□□ 0.28
HDAC6-213ENST00000462730 GUCY1A2P33402 732 aa16.78■□□□□ 0.28
HDAC6-213ENST00000462730 PPP2R5BQ15173 497 aa16.78■□□□□ 0.28
HDAC6-213ENST00000462730 CCDC82Q8N4S0 544 aa16.78■□□□□ 0.28
HDAC6-213ENST00000462730 ZDHHC15Q96MV8 337 aa16.78■□□□□ 0.28
HDAC6-213ENST00000462730 MKNK2Q9HBH9 465 aa16.78■□□□□ 0.28
HDAC6-213ENST00000462730 USP40Q9NVE5 1235 aa16.78■□□□□ 0.28
HDAC6-213ENST00000462730 TFAP4Q01664 338 aa16.77■□□□□ 0.28
HDAC6-213ENST00000462730 MYSM1Q5VVJ2 828 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms