RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 PUM3Q15397 648 aaKnown RBP4□□□□□ -1.77
COL8A1-204ENST00000462604 WHAMMP3Q1A5X7 153 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 LONRF2Q1L5Z9 754 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 SPATA1Q5VX52 437 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 PI16Q6UXB8 463 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 LEKR1Q6ZMV7 388 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 HDXQ7Z353 690 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 SRGAP1Q7Z6B7 1085 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 CNGA4Q8IV77 575 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 TRMT44Q8IYL2 757 aaKnown RBP4□□□□□ -1.77
COL8A1-204ENST00000462604 STK11IPQ8N1F8 1099 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 IGSF22Q8N9C0 903 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 GOLGA5Q8TBA6 731 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 IGDCC4Q8TDY8 1250 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 STAG1Q8WVM7 1258 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 EXOC4Q96A65 974 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 FERMT2Q96AC1 680 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 DHX58Q96C10 678 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 FAM89AQ96GI7 184 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 CCDC85AQ96PX6 553 aaPredicted RBP4□□□□□ -1.77
COL8A1-204ENST00000462604 WDR24Q96S15 920 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 STRBPQ96SI9 672 aaKnown RBP4□□□□□ -1.77
COL8A1-204ENST00000462604 NAPGQ99747 312 aaPredicted RBP4□□□□□ -1.77
COL8A1-204ENST00000462604 UBAC1Q9BSL1 405 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 DESI2Q9BSY9 194 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 MYL10Q9BUA6 226 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 PARD6BQ9BYG5 372 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 UBXN6Q9BZV1 441 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 TOMM22Q9NS69 142 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 AATFQ9NY61 560 aaKnown RBP eCLIP4□□□□□ -1.77
COL8A1-204ENST00000462604 PSD3Q9NYI0 1048 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 TMOD3Q9NYL9 352 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 C5P01031 1676 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 SPEF2Q9C093 1822 aa4□□□□□ -1.77
COL8A1-204ENST00000462604 ITIH6Q6UXX5 1313 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 MROH5Q6ZUA9 1318 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 PNPLA7Q6ZV29 1317 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 GLI3P10071 1580 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 A0A0U1RQG5 324 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-204ENST00000462604 TCRBV5S4A2TA0A5A2 114 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 CTAGE15A4D2H0 777 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 SOWAHDA6NJG2 315 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 BTBD18B2RXH4 712 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 IRS4O14654 1257 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-204ENST00000462604 FANCGO15287 622 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 FOXN1O15353 648 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 SASH3O75995 380 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 CTAGE8P0CG41 777 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 CALM1P0DP23 149 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 CALM2P0DP24 149 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 CALM3P0DP25 149 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 IL2RBP14784 551 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 ATP2B1P20020 1258 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 BMP6P22004 513 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 MCM3P25205 808 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 KRT2P35908 639 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 USP5P45974 858 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 LMAN1P49257 510 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 SARSP49591 514 aaKnown RBP3.99□□□□□ -1.77
COL8A1-204ENST00000462604 HNRNPH2P55795 449 aaKnown RBP3.99□□□□□ -1.77
COL8A1-204ENST00000462604 PIP4K2BP78356 416 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 IRX5P78411 483 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-204ENST00000462604 SLC20A2Q08357 652 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 NR1I3Q14994 352 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 NTRK3Q16288 839 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 ZSCAN26Q16670 478 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 ZNF827Q17R98 1081 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 KIF4BQ2VIQ3 1234 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 HSP90B2PQ58FF3 399 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 HSP90AA4PQ58FG1 418 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 NOM1Q5C9Z4 860 aaKnown RBP3.99□□□□□ -1.77
COL8A1-204ENST00000462604 RRP12Q5JTH9 1297 aaKnown RBP3.99□□□□□ -1.77
COL8A1-204ENST00000462604 SPECC1Q5M775 1068 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 ZNF569Q5MCW4 686 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 AKNAD1Q5T1N1 836 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 CDKAL1Q5VV42 579 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 KLHL10Q6JEL2 608 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 CYP26C1Q6V0L0 522 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 GIGYF2Q6Y7W6 1299 aaKnown RBP3.99□□□□□ -1.77
COL8A1-204ENST00000462604 MFSD6Q6ZSS7 791 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 TOM1L2Q6ZVM7 507 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 CTAGE6Q86UF2 777 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 TMTC1Q8IUR5 882 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 CTAGE4Q8IX94 777 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 GRAMD1CQ8IYS0 662 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 IFNL3Q8IZI9 196 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 CRACR2BQ8N4Y2 399 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-204ENST00000462604 MSL3Q8N5Y2 521 aaKnown RBP3.99□□□□□ -1.77
COL8A1-204ENST00000462604 GOLGA6L1Q8N7Z2 621 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 SPATA5Q8NB90 893 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 EHBP1Q8NDI1 1231 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 CCDC148Q8NFR7 591 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 NEK11Q8NG66 645 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 TTLL11Q8NHH1 800 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 SPATA20Q8TB22 786 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 NUP133Q8WUM0 1156 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 HNRNPLLQ8WVV9 542 aaKnown RBP3.99□□□□□ -1.77
COL8A1-204ENST00000462604 LPIN2Q92539 896 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 ESR2Q92731 530 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 GSDMAQ96QA5 445 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms