RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 METAP2P50579 478 aaKnown RBP eCLIP9.12□□□□□ -0.95
ERCC8-204ENST00000462279 ATP1A2P50993 1020 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 ERVK-24P63145 666 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 RNF187Q5TA31 235 aaPredicted RBP9.12□□□□□ -0.95
ERCC8-204ENST00000462279 WDR93Q6P2C0 686 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 USP49Q70CQ1 688 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 CNGA4Q8IV77 575 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 STAMQ92783 540 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 LRRC59Q96AG4 307 aaKnown RBP9.12□□□□□ -0.95
ERCC8-204ENST00000462279 CD248Q9HCU0 757 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 SEC31BQ9NQW1 1179 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 WWC3Q9ULE0 1092 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 NCAPD2Q15021 1401 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 LAMA4Q16363 1823 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 AARSP49588 968 aaKnown RBP eCLIP9.12□□□□□ -0.95
ERCC8-204ENST00000462279 SLC39A6Q13433 755 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 C1orf141Q5JVX7 400 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 ZMYM1Q5SVZ6 1142 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 NFXL1Q6ZNB6 911 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 SND1Q7KZF4 910 aaKnown RBP eCLIP9.12□□□□□ -0.95
ERCC8-204ENST00000462279 COPS6Q7L5N1 327 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 XAGE3Q8WTP9 111 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 OSBP2Q969R2 916 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 CCDC196A0A1B0GTZ2 297 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 A2ML1A8K2U0 1454 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 FGAP02671 866 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 ATP1A1P05023 1023 aaKnown RBP9.11□□□□□ -0.95
ERCC8-204ENST00000462279 SCP2P22307 547 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 KRT9P35527 623 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 PDCLQ13371 301 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 KCTD16Q68DU8 428 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 CPLX2Q6PUV4 134 aaKnown RBP9.11□□□□□ -0.95
ERCC8-204ENST00000462279 POTEDQ86YR6 584 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 ANKRD18AQ8IVF6 992 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 DHX37Q8IY37 1157 aaKnown RBP9.11□□□□□ -0.95
ERCC8-204ENST00000462279 CHP1Q99653 195 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 NBPF3Q9H094 633 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 VIPAS39Q9H9C1 493 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 COPRSQ9NQ92 184 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 NWD1Q149M9 1564 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 TECPR2O15040 1411 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 SYNRGQ9UMZ2 1314 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 RNF225M0QZC1 329 aaPredicted RBP9.11□□□□□ -0.95
ERCC8-204ENST00000462279 ZNF185O15231 689 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 RNF113AO15541 343 aaKnown RBP9.11□□□□□ -0.95
ERCC8-204ENST00000462279 PLCD1P51178 756 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 LMBR1LQ6UX01 489 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 ILDR2Q71H61 639 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 NCOA7Q8NI08 942 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 CABS1Q96KC9 395 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 RUFY1Q96T51 708 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 MAP3K14Q99558 947 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 JADE2Q9NQC1 790 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 SAR1BQ9Y6B6 198 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 ADAMTS7Q9UKP4 1686 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 BTBD18B2RXH4 712 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 AGPSO00116 658 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 ARHGAP25P42331 645 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 MDM2Q00987 491 aaPredicted RBP9.11□□□□□ -0.95
ERCC8-204ENST00000462279 MORC3Q14149 939 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 CCDC122Q5T0U0 273 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 TMTC1Q8IUR5 882 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 SLC26A6Q9BXS9 759 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 KCNJ14Q9UNX9 436 aa9.11□□□□□ -0.95
ERCC8-204ENST00000462279 A0A087WZG4 1122 aa9.1□□□□□ -0.95
ERCC8-204ENST00000462279 ZNF213O14771 459 aa9.1□□□□□ -0.95
ERCC8-204ENST00000462279 SSBP05455 408 aaKnown RBP eCLIP9.1□□□□□ -0.95
ERCC8-204ENST00000462279 MCM3P25205 808 aa9.1□□□□□ -0.95
ERCC8-204ENST00000462279 IARSP41252 1262 aaKnown RBP9.1□□□□□ -0.95
ERCC8-204ENST00000462279 ANTXR2P58335 489 aa9.1□□□□□ -0.95
ERCC8-204ENST00000462279 PPFIA1Q13136 1202 aa9.1□□□□□ -0.95
ERCC8-204ENST00000462279 CEP57Q86XR8 500 aa9.1□□□□□ -0.95
ERCC8-204ENST00000462279 GNL3LQ9NVN8 582 aaKnown RBP9.1□□□□□ -0.95
ERCC8-204ENST00000462279 ADD3Q9UEY8 706 aaKnown RBP9.1□□□□□ -0.95
ERCC8-204ENST00000462279 EIF3HO15372 352 aaKnown RBP eCLIP9.1□□□□□ -0.95
ERCC8-204ENST00000462279 CD44P16070 742 aaKnown RBP9.1□□□□□ -0.95
ERCC8-204ENST00000462279 AMPD2Q01433 879 aa9.1□□□□□ -0.95
ERCC8-204ENST00000462279 C2orf54Q08AI8 447 aa9.1□□□□□ -0.95
ERCC8-204ENST00000462279 PPP2R5AQ15172 486 aa9.1□□□□□ -0.95
ERCC8-204ENST00000462279 CYP26C1Q6V0L0 522 aa9.1□□□□□ -0.95
ERCC8-204ENST00000462279 RRP36Q96EU6 259 aaKnown RBP9.1□□□□□ -0.95
ERCC8-204ENST00000462279 SENP2Q9HC62 589 aa9.1□□□□□ -0.95
ERCC8-204ENST00000462279 DDX21Q9NR30 783 aaKnown RBP eCLIP9.1□□□□□ -0.95
ERCC8-204ENST00000462279 ABHD10Q9NUJ1 306 aa9.1□□□□□ -0.95
ERCC8-204ENST00000462279 TAB2Q9NYJ8 693 aa9.1□□□□□ -0.95
ERCC8-204ENST00000462279 CAMTA1Q9Y6Y1 1673 aa9.1□□□□□ -0.95
ERCC8-204ENST00000462279 CEMIPQ8WUJ3 1361 aa9.1□□□□□ -0.95
ERCC8-204ENST00000462279 PALLDQ8WX93 1383 aa9.1□□□□□ -0.95
ERCC8-204ENST00000462279 FRMD3A2A2Y4 597 aa9.09□□□□□ -0.95
ERCC8-204ENST00000462279 ACTN3Q08043 901 aaPredicted RBP9.09□□□□□ -0.95
ERCC8-204ENST00000462279 SPATA1Q5VX52 437 aa9.09□□□□□ -0.95
ERCC8-204ENST00000462279 KIAA1328Q86T90 577 aa9.09□□□□□ -0.95
ERCC8-204ENST00000462279 SH2D3CQ8N5H7 860 aa9.09□□□□□ -0.95
ERCC8-204ENST00000462279 JAKMIP2Q96AA8 810 aa9.09□□□□□ -0.95
ERCC8-204ENST00000462279 AIDAQ96BJ3 306 aa9.09□□□□□ -0.95
ERCC8-204ENST00000462279 PSMB7Q99436 277 aa9.09□□□□□ -0.95
ERCC8-204ENST00000462279 MAPK8IP1Q9UQF2 711 aa9.09□□□□□ -0.95
ERCC8-204ENST00000462279 EPN1Q9Y6I3 576 aaPredicted RBP9.09□□□□□ -0.95
ERCC8-204ENST00000462279 SLC7A5Q01650 507 aa9.09□□□□□ -0.95
ERCC8-204ENST00000462279 RPAINQ86UA6 219 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms