RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 XAGE2Q96GT9 111 aa12.49□□□□□ -0.41
SCNM1-204ENST00000461862 GAS2L1Q99501 681 aaPredicted RBP12.49□□□□□ -0.41
SCNM1-204ENST00000461862 CCDC8Q9H0W5 538 aaPredicted RBP12.49□□□□□ -0.41
SCNM1-204ENST00000461862 GREM2Q9H772 168 aa12.49□□□□□ -0.41
SCNM1-204ENST00000461862 FAM177BA6PVY3 158 aa12.48□□□□□ -0.41
SCNM1-204ENST00000461862 GPR25O00155 361 aa12.48□□□□□ -0.41
SCNM1-204ENST00000461862 HIP1O00291 1037 aa12.48□□□□□ -0.41
SCNM1-204ENST00000461862 POLRMTO00411 1230 aaKnown RBP12.48□□□□□ -0.41
SCNM1-204ENST00000461862 ATP5JP18859 108 aa12.48□□□□□ -0.41
SCNM1-204ENST00000461862 LRRC24Q50LG9 513 aa12.48□□□□□ -0.41
SCNM1-204ENST00000461862 WDR44Q5JSH3 913 aa12.48□□□□□ -0.41
SCNM1-204ENST00000461862 TICAM2Q86XR7 235 aa12.48□□□□□ -0.41
SCNM1-204ENST00000461862 SYNE4Q8N205 404 aa12.48□□□□□ -0.41
SCNM1-204ENST00000461862 ZNF594Q96JF6 807 aaPredicted RBP12.48□□□□□ -0.41
SCNM1-204ENST00000461862 DBNLQ9UJU6 430 aaKnown RBP12.48□□□□□ -0.41
SCNM1-204ENST00000461862 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.48□□□□□ -0.41
SCNM1-204ENST00000461862 A0A1B0GUL6 1792 aa12.48□□□□□ -0.41
SCNM1-204ENST00000461862 BECN1Q14457 450 aa12.47□□□□□ -0.41
SCNM1-204ENST00000461862 SLC10A5Q5PT55 438 aa12.47□□□□□ -0.41
SCNM1-204ENST00000461862 SLC51AQ86UW1 340 aa12.47□□□□□ -0.41
SCNM1-204ENST00000461862 SVOPQ8N4V2 548 aa12.47□□□□□ -0.41
SCNM1-204ENST00000461862 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.47□□□□□ -0.41
SCNM1-204ENST00000461862 GMCL1Q96IK5 515 aa12.47□□□□□ -0.41
SCNM1-204ENST00000461862 SETDB2Q96T68 719 aa12.47□□□□□ -0.41
SCNM1-204ENST00000461862 ETNK1Q9HBU6 452 aa12.47□□□□□ -0.41
SCNM1-204ENST00000461862 TIMMDC1Q9NPL8 285 aa12.47□□□□□ -0.41
SCNM1-204ENST00000461862 TLR7Q9NYK1 1049 aaKnown RBP12.47□□□□□ -0.41
SCNM1-204ENST00000461862 RIPOR2Q9Y4F9 1068 aa12.47□□□□□ -0.41
SCNM1-204ENST00000461862 MROH5Q6ZUA9 1318 aa12.46□□□□□ -0.41
SCNM1-204ENST00000461862 THBS1P07996 1170 aa12.46□□□□□ -0.41
SCNM1-204ENST00000461862 HCLS1P14317 486 aaPredicted RBP12.46□□□□□ -0.41
SCNM1-204ENST00000461862 POLD1P28340 1107 aa12.46□□□□□ -0.41
SCNM1-204ENST00000461862 GSK3AP49840 483 aa12.46□□□□□ -0.41
SCNM1-204ENST00000461862 USP4Q13107 963 aa12.46□□□□□ -0.41
SCNM1-204ENST00000461862 SF3B3Q15393 1217 aaKnown RBP12.46□□□□□ -0.41
SCNM1-204ENST00000461862 LDHAL6AQ6ZMR3 332 aa12.46□□□□□ -0.41
SCNM1-204ENST00000461862 RUFY2Q8WXA3 655 aa12.46□□□□□ -0.41
SCNM1-204ENST00000461862 DBNDD2Q9BQY9 259 aa12.46□□□□□ -0.41
SCNM1-204ENST00000461862 SYT17Q9BSW7 474 aa12.46□□□□□ -0.41
SCNM1-204ENST00000461862 PUS3Q9BZE2 481 aaKnown RBP12.46□□□□□ -0.41
SCNM1-204ENST00000461862 CNNM1Q9NRU3 951 aa12.46□□□□□ -0.41
SCNM1-204ENST00000461862 KIAA1551Q9HCM1 1747 aa12.45□□□□□ -0.42
SCNM1-204ENST00000461862 RAD50Q92878 1312 aa12.45□□□□□ -0.42
SCNM1-204ENST00000461862 A0A1B0GUL7 405 aa12.45□□□□□ -0.42
SCNM1-204ENST00000461862 SRSF11Q05519 484 aaKnown RBP12.45□□□□□ -0.42
SCNM1-204ENST00000461862 METTL24Q5JXM2 366 aa12.45□□□□□ -0.42
SCNM1-204ENST00000461862 CDC5LQ99459 802 aaKnown RBP12.45□□□□□ -0.42
SCNM1-204ENST00000461862 USP26Q9BXU7 913 aa12.45□□□□□ -0.42
SCNM1-204ENST00000461862 ARHGEF15O94989 841 aa12.44□□□□□ -0.42
SCNM1-204ENST00000461862 SERPINB2P05120 415 aa12.44□□□□□ -0.42
SCNM1-204ENST00000461862 MCCP23508 829 aa12.44□□□□□ -0.42
SCNM1-204ENST00000461862 GTF2E1P29083 439 aaPredicted RBP12.44□□□□□ -0.42
SCNM1-204ENST00000461862 CHRNA5P30532 468 aa12.44□□□□□ -0.42
SCNM1-204ENST00000461862 IGHMBP2P38935 993 aaKnown RBP12.44□□□□□ -0.42
SCNM1-204ENST00000461862 TPTE2Q6XPS3 522 aa12.44□□□□□ -0.42
SCNM1-204ENST00000461862 NBPF5PQ86XG9 351 aaPredicted RBP12.44□□□□□ -0.42
SCNM1-204ENST00000461862 NLGN1Q8N2Q7 840 aa12.44□□□□□ -0.42
SCNM1-204ENST00000461862 PLPP7Q8NBV4 271 aa12.44□□□□□ -0.42
SCNM1-204ENST00000461862 GTPBP3Q969Y2 492 aaKnown RBP12.44□□□□□ -0.42
SCNM1-204ENST00000461862 POM121Q96HA1 1249 aa12.44□□□□□ -0.42
SCNM1-204ENST00000461862 ZSCAN10Q96SZ4 725 aaPredicted RBP12.44□□□□□ -0.42
SCNM1-204ENST00000461862 HAUS7Q99871 368 aa12.44□□□□□ -0.42
SCNM1-204ENST00000461862 BOLA2Q9H3K6 86 aa12.44□□□□□ -0.42
SCNM1-204ENST00000461862 DIAPH3Q9NSV4 1193 aa12.44□□□□□ -0.42
SCNM1-204ENST00000461862 C10orf71Q711Q0 1435 aa12.44□□□□□ -0.42
SCNM1-204ENST00000461862 MYH7P12883 1935 aa12.43□□□□□ -0.42
SCNM1-204ENST00000461862 TNRC6CQ9HCJ0 1690 aaKnown RBP12.43□□□□□ -0.42
SCNM1-204ENST00000461862 PIK3CDO00329 1044 aa12.43□□□□□ -0.42
SCNM1-204ENST00000461862 SGSM2O43147 1006 aa12.43□□□□□ -0.42
SCNM1-204ENST00000461862 PDE8BO95263 885 aa12.43□□□□□ -0.42
SCNM1-204ENST00000461862 MAP4K4O95819 1239 aaPredicted RBP12.43□□□□□ -0.42
SCNM1-204ENST00000461862 PHKA2P46019 1235 aa12.43□□□□□ -0.42
SCNM1-204ENST00000461862 SCNN1DP51172 638 aa12.43□□□□□ -0.42
SCNM1-204ENST00000461862 ATP2B3Q16720 1220 aa12.43□□□□□ -0.42
SCNM1-204ENST00000461862 PRR5LQ6MZQ0 368 aa12.43□□□□□ -0.42
SCNM1-204ENST00000461862 LYPD4Q6UWN0 246 aa12.43□□□□□ -0.42
SCNM1-204ENST00000461862 VGLL2Q8N8G2 317 aa12.43□□□□□ -0.42
SCNM1-204ENST00000461862 NEUROD6Q96NK8 337 aa12.43□□□□□ -0.42
SCNM1-204ENST00000461862 MPHOSPH8Q99549 860 aa12.43□□□□□ -0.42
SCNM1-204ENST00000461862 UTRNP46939 3433 aa12.43□□□□□ -0.42
SCNM1-204ENST00000461862 A0A0G2JLW4 131 aa12.42□□□□□ -0.42
SCNM1-204ENST00000461862 F11P03951 625 aa12.42□□□□□ -0.42
SCNM1-204ENST00000461862 TIMM10P62072 90 aa12.42□□□□□ -0.42
SCNM1-204ENST00000461862 SEMA3FQ13275 785 aa12.42□□□□□ -0.42
SCNM1-204ENST00000461862 PUM3Q15397 648 aaKnown RBP12.42□□□□□ -0.42
SCNM1-204ENST00000461862 CCDC158Q5M9N0 1113 aa12.42□□□□□ -0.42
SCNM1-204ENST00000461862 ZNF512BQ96KM6 892 aaPredicted RBP12.42□□□□□ -0.42
SCNM1-204ENST00000461862 FSD1Q9BTV5 496 aa12.42□□□□□ -0.42
SCNM1-204ENST00000461862 PARP3Q9Y6F1 533 aa12.42□□□□□ -0.42
SCNM1-204ENST00000461862 AKAP11Q9UKA4 1901 aa12.41□□□□□ -0.42
SCNM1-204ENST00000461862 IFIT1P09914 478 aaKnown RBP12.41□□□□□ -0.42
SCNM1-204ENST00000461862 DPEP1P16444 411 aa12.41□□□□□ -0.42
SCNM1-204ENST00000461862 YBX3P16989 372 aaKnown RBP eCLIP12.41□□□□□ -0.421e-8■■■□□ 16.6
SCNM1-204ENST00000461862 SOX11P35716 441 aa12.41□□□□□ -0.42
SCNM1-204ENST00000461862 ANAPC15P60006 121 aa12.41□□□□□ -0.42
SCNM1-204ENST00000461862 KCNMA1Q12791 1236 aa12.41□□□□□ -0.42
SCNM1-204ENST00000461862 RABEP1Q15276 862 aa12.41□□□□□ -0.42
SCNM1-204ENST00000461862 LRRFIP1Q32MZ4 808 aaKnown RBP12.41□□□□□ -0.42
SCNM1-204ENST00000461862 C4orf17Q53FE4 359 aa12.41□□□□□ -0.42
SCNM1-204ENST00000461862 GORABQ5T7V8 394 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms