RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 GRIK5Q16478 980 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 ECM1Q16610 540 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 AKNAD1Q5T1N1 836 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 FBXO33Q7Z6M2 555 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 GRAMD1CQ8IYS0 662 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 FAM84BQ96KN1 310 aaPredicted RBP8.48□□□□□ -1.05
NPHP1-209ENST00000461707 ZNF396Q96N95 335 aaPredicted RBP8.48□□□□□ -1.05
NPHP1-209ENST00000461707 KINO60870 393 aaKnown RBP8.48□□□□□ -1.05
NPHP1-209ENST00000461707 UQCRFS1P1P0C7P4 283 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 ATP2B1P20020 1258 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 LIFRP42702 1097 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 TDO2P48775 406 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 CCDC152Q4G0S7 254 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 CCDC73Q6ZRK6 1079 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 SDF4Q9BRK5 362 aa8.48□□□□□ -1.05
NPHP1-209ENST00000461707 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.48□□□□□ -1.05
NPHP1-209ENST00000461707 FANCGO15287 622 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 MAP3K12Q12852 859 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 LONRF3Q496Y0 759 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 FILIP1Q7Z7B0 1213 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 TMEM139Q8IV31 216 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 NUP133Q8WUM0 1156 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 TPM2P07951 284 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 IGHMBP2P38935 993 aaKnown RBP8.47□□□□□ -1.05
NPHP1-209ENST00000461707 PDE4BQ07343 736 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 DPF2Q92785 391 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 C16orf45Q96MC5 204 aaPredicted RBP8.47□□□□□ -1.05
NPHP1-209ENST00000461707 C8orf37Q96NL8 207 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 RAI14Q9P0K7 980 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 KIAA1468Q9P260 1216 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 COL11A1P12107 1806 aaPredicted RBP8.47□□□□□ -1.05
NPHP1-209ENST00000461707 CASP1P29466 404 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 PRDX5P30044 214 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 HSP90AA2PQ14568 343 aaPredicted RBP8.47□□□□□ -1.05
NPHP1-209ENST00000461707 SLC39A14Q15043 492 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 SLC35G1Q2M3R5 365 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 PCDHB6Q9Y5E3 794 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 SLC12A7Q9Y666 1083 aa8.47□□□□□ -1.05
NPHP1-209ENST00000461707 PLEKHA8P1O95397 391 aa8.46□□□□□ -1.05
NPHP1-209ENST00000461707 IARSP41252 1262 aaKnown RBP8.46□□□□□ -1.05
NPHP1-209ENST00000461707 PPARAQ07869 468 aa8.46□□□□□ -1.05
NPHP1-209ENST00000461707 STX1AQ16623 288 aa8.46□□□□□ -1.05
NPHP1-209ENST00000461707 LRRFIP1Q32MZ4 808 aaKnown RBP8.46□□□□□ -1.05
NPHP1-209ENST00000461707 MFSD6Q6ZSS7 791 aa8.46□□□□□ -1.05
NPHP1-209ENST00000461707 RASGRP2Q7LDG7 609 aa8.46□□□□□ -1.05
NPHP1-209ENST00000461707 RIOK3O14730 519 aaKnown RBP8.46□□□□□ -1.06
NPHP1-209ENST00000461707 PRR29P0C7W0 189 aa8.46□□□□□ -1.06
NPHP1-209ENST00000461707 PKN1Q16512 942 aa8.46□□□□□ -1.06
NPHP1-209ENST00000461707 METTL16Q86W50 562 aaKnown RBP8.46□□□□□ -1.06
NPHP1-209ENST00000461707 C4orf32Q8N8J7 132 aa8.46□□□□□ -1.06
NPHP1-209ENST00000461707 ZNF827Q17R98 1081 aa8.46□□□□□ -1.06
NPHP1-209ENST00000461707 FAM47AQ5JRC9 791 aa8.46□□□□□ -1.06
NPHP1-209ENST00000461707 A0A087X0B3 334 aa8.45□□□□□ -1.06
NPHP1-209ENST00000461707 SYNE3Q6ZMZ3 975 aa8.45□□□□□ -1.06
NPHP1-209ENST00000461707 LRRC8AQ8IWT6 810 aa8.45□□□□□ -1.06
NPHP1-209ENST00000461707 TRMT1Q9NXH9 659 aaKnown RBP8.45□□□□□ -1.06
NPHP1-209ENST00000461707 VPS54Q9P1Q0 977 aa8.45□□□□□ -1.06
NPHP1-209ENST00000461707 SPATA31A6Q5VVP1 1343 aa8.45□□□□□ -1.06
NPHP1-209ENST00000461707 COBLO75128 1261 aa8.45□□□□□ -1.06
NPHP1-209ENST00000461707 YEATS4O95619 227 aa8.45□□□□□ -1.06
NPHP1-209ENST00000461707 LMOD1P29536 600 aaPredicted RBP8.45□□□□□ -1.06
NPHP1-209ENST00000461707 PBX1P40424 430 aa8.45□□□□□ -1.06
NPHP1-209ENST00000461707 TBX2Q13207 712 aaPredicted RBP8.45□□□□□ -1.06
NPHP1-209ENST00000461707 FAM177A1Q8N128 213 aaPredicted RBP8.45□□□□□ -1.06
NPHP1-209ENST00000461707 ENAHQ8N8S7 591 aaPredicted RBP8.45□□□□□ -1.06
NPHP1-209ENST00000461707 TIGD1Q96MW7 591 aa8.45□□□□□ -1.06
NPHP1-209ENST00000461707 XPO4Q9C0E2 1151 aaKnown RBP8.45□□□□□ -1.06
NPHP1-209ENST00000461707 AATFQ9NY61 560 aaKnown RBP eCLIP8.45□□□□□ -1.06
NPHP1-209ENST00000461707 TNKSO95271 1327 aa8.45□□□□□ -1.06
NPHP1-209ENST00000461707 CCDC69A6NI79 296 aa8.45□□□□□ -1.06
NPHP1-209ENST00000461707 DHX16O60231 1041 aaKnown RBP8.45□□□□□ -1.06
NPHP1-209ENST00000461707 FMNL1O95466 1100 aaPredicted RBP8.45□□□□□ -1.06
NPHP1-209ENST00000461707 CCZ1BP86790 482 aa8.45□□□□□ -1.06
NPHP1-209ENST00000461707 CCZ1P86791 482 aaPredicted RBP8.45□□□□□ -1.06
NPHP1-209ENST00000461707 NYAP1Q6ZVC0 841 aa8.45□□□□□ -1.06
NPHP1-209ENST00000461707 DIS3L2Q8IYB7 885 aaKnown RBP8.45□□□□□ -1.06
NPHP1-209ENST00000461707 CRACR2BQ8N4Y2 399 aaPredicted RBP8.45□□□□□ -1.06
NPHP1-209ENST00000461707 MYRIPQ8NFW9 859 aa8.45□□□□□ -1.06
NPHP1-209ENST00000461707 TMEM87BQ96K49 555 aa8.45□□□□□ -1.06
NPHP1-209ENST00000461707 ZNF236Q9UL36 1845 aa8.45□□□□□ -1.06
NPHP1-209ENST00000461707 MAGEB6P1A0A0J9YX57 407 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 CMA1P23946 247 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 MECOMQ03112 1051 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 CHAF1AQ13111 956 aaPredicted RBP8.44□□□□□ -1.06
NPHP1-209ENST00000461707 PARP10Q53GL7 1025 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 CTR9Q6PD62 1173 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 ANKRD18AQ8IVF6 992 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 ZNF654Q8IZM8 581 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 KCNG4Q8TDN1 519 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 IFNKQ9P0W0 207 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 IGKV6D-41A0A0C4DH26 115 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 USP17L12C9JPN9 530 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 TMEM232C9JQI7 657 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 USP17L21D6R901 530 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 WTAPQ15007 396 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 BRAPQ7Z569 592 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.44□□□□□ -1.06
NPHP1-209ENST00000461707 PDILTQ8N807 584 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 FANCBQ8NB91 859 aa8.44□□□□□ -1.06
NPHP1-209ENST00000461707 BECN2A8MW95 431 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms