RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 PCSK7Q16549 785 aa7.53□□□□□ -1.2
SPTA1-202ENST00000461624 DEFB115Q30KQ5 88 aa7.53□□□□□ -1.2
SPTA1-202ENST00000461624 TAF1DQ9H5J8 278 aaPredicted RBP7.53□□□□□ -1.2
SPTA1-202ENST00000461624 JPH1Q9HDC5 661 aaPredicted RBP7.53□□□□□ -1.2
SPTA1-202ENST00000461624 DNAJB12Q9NXW2 375 aaKnown RBP7.53□□□□□ -1.2
SPTA1-202ENST00000461624 SRP68Q9UHB9 627 aaKnown RBP7.53□□□□□ -1.2
SPTA1-202ENST00000461624 LTBP3Q9NS15 1303 aa7.52□□□□□ -1.2
SPTA1-202ENST00000461624 A0A0A0MRY4 1105 aa7.52□□□□□ -1.21
SPTA1-202ENST00000461624 DDNO94850 711 aaPredicted RBP7.52□□□□□ -1.21
SPTA1-202ENST00000461624 RFC4P35249 363 aa7.52□□□□□ -1.21
SPTA1-202ENST00000461624 GRIK4Q16099 956 aa7.52□□□□□ -1.21
SPTA1-202ENST00000461624 CDCA8Q53HL2 280 aa7.52□□□□□ -1.21
SPTA1-202ENST00000461624 FAM200AQ8TCP9 573 aa7.52□□□□□ -1.21
SPTA1-202ENST00000461624 TRPM7Q96QT4 1865 aa7.51□□□□□ -1.21
SPTA1-202ENST00000461624 ARFGEF2Q9Y6D5 1785 aa7.51□□□□□ -1.21
SPTA1-202ENST00000461624 INSRP06213 1382 aa7.51□□□□□ -1.21
SPTA1-202ENST00000461624 CARMIL3Q8ND23 1372 aa7.51□□□□□ -1.21
SPTA1-202ENST00000461624 DYRK3O43781 588 aa7.51□□□□□ -1.21
SPTA1-202ENST00000461624 ATG7O95352 703 aa7.51□□□□□ -1.21
SPTA1-202ENST00000461624 MAP3K6O95382 1288 aa7.51□□□□□ -1.21
SPTA1-202ENST00000461624 NFKB1P19838 968 aa7.51□□□□□ -1.21
SPTA1-202ENST00000461624 ELOAQ14241 798 aaKnown RBP7.51□□□□□ -1.21
SPTA1-202ENST00000461624 ADGRE1Q14246 886 aa7.51□□□□□ -1.21
SPTA1-202ENST00000461624 ZMYM1Q5SVZ6 1142 aa7.51□□□□□ -1.21
SPTA1-202ENST00000461624 PSAPL1Q6NUJ1 521 aa7.51□□□□□ -1.21
SPTA1-202ENST00000461624 TTLL6Q8N841 843 aa7.51□□□□□ -1.21
SPTA1-202ENST00000461624 CAPNS2Q96L46 248 aa7.51□□□□□ -1.21
SPTA1-202ENST00000461624 IGFLR1Q9H665 355 aa7.51□□□□□ -1.21
SPTA1-202ENST00000461624 TMOD3Q9NYL9 352 aa7.51□□□□□ -1.21
SPTA1-202ENST00000461624 NAGPAQ9UK23 515 aa7.51□□□□□ -1.21
SPTA1-202ENST00000461624 NOVA2Q9UNW9 492 aaKnown RBP7.51□□□□□ -1.21
SPTA1-202ENST00000461624 ANKRD26Q9UPS8 1709 aa7.5□□□□□ -1.21
SPTA1-202ENST00000461624 TONSLQ96HA7 1378 aa7.5□□□□□ -1.21
SPTA1-202ENST00000461624 WEE1P30291 646 aa7.5□□□□□ -1.21
SPTA1-202ENST00000461624 INPP5BP32019 993 aa7.5□□□□□ -1.21
SPTA1-202ENST00000461624 AMPHP49418 695 aa7.5□□□□□ -1.21
SPTA1-202ENST00000461624 IDH3AP50213 366 aa7.5□□□□□ -1.21
SPTA1-202ENST00000461624 AFF1P51825 1210 aaKnown RBP7.5□□□□□ -1.21
SPTA1-202ENST00000461624 NRG1Q02297 640 aaPredicted RBP7.5□□□□□ -1.21
SPTA1-202ENST00000461624 LENG1Q96BZ8 264 aaPredicted RBP7.5□□□□□ -1.21
SPTA1-202ENST00000461624 MYO19Q96H55 970 aa7.5□□□□□ -1.21
SPTA1-202ENST00000461624 SLC12A5Q9H2X9 1139 aa7.5□□□□□ -1.21
SPTA1-202ENST00000461624 FRRS1LQ9P0K9 344 aa7.5□□□□□ -1.21
SPTA1-202ENST00000461624 UNC80Q8N2C7 3258 aa7.49□□□□□ -1.21
SPTA1-202ENST00000461624 IQCA1LA6NCM1 817 aa7.49□□□□□ -1.21
SPTA1-202ENST00000461624 RGS9O75916 674 aaPredicted RBP7.49□□□□□ -1.21
SPTA1-202ENST00000461624 SELPP16109 830 aa7.49□□□□□ -1.21
SPTA1-202ENST00000461624 ARSDP51689 593 aa7.49□□□□□ -1.21
SPTA1-202ENST00000461624 SOX10P56693 466 aa7.49□□□□□ -1.21
SPTA1-202ENST00000461624 MBTPS1Q14703 1052 aa7.49□□□□□ -1.21
SPTA1-202ENST00000461624 RRS1Q15050 365 aaKnown RBP7.49□□□□□ -1.21
SPTA1-202ENST00000461624 HSP90AB2PQ58FF8 381 aa7.49□□□□□ -1.21
SPTA1-202ENST00000461624 NUDT8Q8WV74 236 aa7.49□□□□□ -1.21
SPTA1-202ENST00000461624 SLX4Q8IY92 1834 aa7.49□□□□□ -1.21
SPTA1-202ENST00000461624 CA12O43570 354 aa7.48□□□□□ -1.21
SPTA1-202ENST00000461624 GRNP28799 593 aaKnown RBP7.48□□□□□ -1.21
SPTA1-202ENST00000461624 DGKZQ13574 1117 aa7.48□□□□□ -1.21
SPTA1-202ENST00000461624 CACNA1SQ13698 1873 aa7.48□□□□□ -1.21
SPTA1-202ENST00000461624 HDGFL2Q7Z4V5 671 aaPredicted RBP7.48□□□□□ -1.21
SPTA1-202ENST00000461624 TXNRD3Q86VQ6 643 aa7.48□□□□□ -1.21
SPTA1-202ENST00000461624 FMR1NBQ8N0W7 255 aaPredicted RBP7.48□□□□□ -1.21
SPTA1-202ENST00000461624 DTWD1Q8N5C7 304 aa7.48□□□□□ -1.21
SPTA1-202ENST00000461624 GPR101Q96P66 508 aaPredicted RBP7.48□□□□□ -1.21
SPTA1-202ENST00000461624 KLK14Q9P0G3 267 aa7.48□□□□□ -1.21
SPTA1-202ENST00000461624 FLT4P35916 1363 aa7.47□□□□□ -1.21
SPTA1-202ENST00000461624 KIF24Q5T7B8 1368 aa7.47□□□□□ -1.21
SPTA1-202ENST00000461624 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.47□□□□□ -1.21
SPTA1-202ENST00000461624 H2AFB1P0C5Y9 115 aa7.47□□□□□ -1.21
SPTA1-202ENST00000461624 H2AFB2P0C5Z0 115 aa7.47□□□□□ -1.21
SPTA1-202ENST00000461624 PHKG2P15735 406 aa7.47□□□□□ -1.21
SPTA1-202ENST00000461624 MAP2K2P36507 400 aa7.47□□□□□ -1.21
SPTA1-202ENST00000461624 CRKLP46109 303 aaKnown RBP7.47□□□□□ -1.21
SPTA1-202ENST00000461624 NFIXQ14938 502 aa7.47□□□□□ -1.21
SPTA1-202ENST00000461624 HABP4Q5JVS0 413 aaKnown RBP7.47□□□□□ -1.21
SPTA1-202ENST00000461624 MAP1SQ66K74 1059 aaPredicted RBP7.47□□□□□ -1.21
SPTA1-202ENST00000461624 CYP4F22Q6NT55 531 aa7.47□□□□□ -1.21
SPTA1-202ENST00000461624 FAM35AQ86V20 835 aa7.47□□□□□ -1.21
SPTA1-202ENST00000461624 CNTROBQ8N137 903 aa7.47□□□□□ -1.21
SPTA1-202ENST00000461624 VTI1AQ96AJ9 217 aa7.47□□□□□ -1.21
SPTA1-202ENST00000461624 COG3Q96JB2 828 aa7.47□□□□□ -1.21
SPTA1-202ENST00000461624 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.47□□□□□ -1.21
SPTA1-202ENST00000461624 DDX21Q9NR30 783 aaKnown RBP eCLIP7.47□□□□□ -1.21
SPTA1-202ENST00000461624 LAMA3Q16787 3333 aa7.47□□□□□ -1.21
SPTA1-202ENST00000461624 ZNF541Q9H0D2 1346 aa7.47□□□□□ -1.21
SPTA1-202ENST00000461624 BCORQ6W2J9 1755 aa7.46□□□□□ -1.21
SPTA1-202ENST00000461624 AOC2O75106 756 aa7.46□□□□□ -1.22
SPTA1-202ENST00000461624 LGR5O75473 907 aa7.46□□□□□ -1.22
SPTA1-202ENST00000461624 ARID4AP29374 1257 aaPredicted RBP7.46□□□□□ -1.22
SPTA1-202ENST00000461624 ECE1P42892 770 aa7.46□□□□□ -1.22
SPTA1-202ENST00000461624 GPLD1P80108 840 aa7.46□□□□□ -1.22
SPTA1-202ENST00000461624 FMR1Q06787 632 aaKnown RBP eCLIP7.46□□□□□ -1.22
SPTA1-202ENST00000461624 PDE4CQ08493 712 aa7.46□□□□□ -1.22
SPTA1-202ENST00000461624 SWI5Q1ZZU3 235 aa7.46□□□□□ -1.22
SPTA1-202ENST00000461624 C11orf91Q3C1V1 193 aa7.46□□□□□ -1.22
SPTA1-202ENST00000461624 CST9Q5W186 159 aa7.46□□□□□ -1.22
SPTA1-202ENST00000461624 INTS5Q6P9B9 1019 aaKnown RBP7.46□□□□□ -1.22
SPTA1-202ENST00000461624 DHX32Q7L7V1 743 aaKnown RBP7.46□□□□□ -1.22
SPTA1-202ENST00000461624 C2CD5Q86YS7 1000 aa7.46□□□□□ -1.22
SPTA1-202ENST00000461624 TRPM4Q8TD43 1214 aa7.46□□□□□ -1.22
SPTA1-202ENST00000461624 TTC9Q92623 222 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms