RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 RASA1P20936 1047 aa13.4□□□□□ -0.26
SSBP1-202ENST00000461433 CERKLQ49MI3 558 aaPredicted RBP13.4□□□□□ -0.26
SSBP1-202ENST00000461433 SCYL3Q8IZE3 742 aa13.4□□□□□ -0.26
SSBP1-202ENST00000461433 NKX2-3Q8TAU0 364 aa13.4□□□□□ -0.26
SSBP1-202ENST00000461433 FAM155AB1AL88 458 aaPredicted RBP13.4□□□□□ -0.26
SSBP1-202ENST00000461433 PRDM1O75626 825 aa13.4□□□□□ -0.26
SSBP1-202ENST00000461433 GDF11O95390 407 aa13.4□□□□□ -0.26
SSBP1-202ENST00000461433 SEC24BO95487 1268 aa13.4□□□□□ -0.26
SSBP1-202ENST00000461433 GUCY1A2P33402 732 aa13.4□□□□□ -0.26
SSBP1-202ENST00000461433 IMMTQ16891 758 aaKnown RBP13.4□□□□□ -0.26
SSBP1-202ENST00000461433 DEFB115Q30KQ5 88 aa13.4□□□□□ -0.26
SSBP1-202ENST00000461433 RGMBQ6NW40 437 aa13.4□□□□□ -0.26
SSBP1-202ENST00000461433 STAG1Q8WVM7 1258 aa13.4□□□□□ -0.26
SSBP1-202ENST00000461433 CNKSR2Q8WXI2 1034 aa13.4□□□□□ -0.26
SSBP1-202ENST00000461433 ELP3Q9H9T3 547 aa13.4□□□□□ -0.26
SSBP1-202ENST00000461433 CSADQ9Y600 493 aa13.4□□□□□ -0.26
SSBP1-202ENST00000461433 AKR1B1P15121 316 aa13.39□□□□□ -0.27
SSBP1-202ENST00000461433 PTPRAP18433 802 aa13.39□□□□□ -0.27
SSBP1-202ENST00000461433 GJA5P36382 358 aa13.39□□□□□ -0.27
SSBP1-202ENST00000461433 PDE4BQ07343 736 aa13.39□□□□□ -0.27
SSBP1-202ENST00000461433 AKNAD1Q5T1N1 836 aa13.39□□□□□ -0.27
SSBP1-202ENST00000461433 RASAL3Q86YV0 1011 aa13.39□□□□□ -0.27
SSBP1-202ENST00000461433 SLC10A4Q96EP9 437 aa13.39□□□□□ -0.27
SSBP1-202ENST00000461433 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.39□□□□□ -0.27
SSBP1-202ENST00000461433 USP26Q9BXU7 913 aa13.39□□□□□ -0.27
SSBP1-202ENST00000461433 SPDYE5A6NIY4 337 aa13.38□□□□□ -0.27
SSBP1-202ENST00000461433 SLC27A2O14975 620 aa13.38□□□□□ -0.27
SSBP1-202ENST00000461433 ORC4O43929 436 aa13.38□□□□□ -0.27
SSBP1-202ENST00000461433 REC8O95072 547 aa13.38□□□□□ -0.27
SSBP1-202ENST00000461433 GH2P01242 217 aa13.38□□□□□ -0.27
SSBP1-202ENST00000461433 SLC3A2P08195 630 aaKnown RBP13.38□□□□□ -0.27
SSBP1-202ENST00000461433 ZNF157P51786 506 aaPredicted RBP13.38□□□□□ -0.27
SSBP1-202ENST00000461433 ABCB5Q2M3G0 1257 aa13.38□□□□□ -0.27
SSBP1-202ENST00000461433 CREB3L3Q68CJ9 461 aa13.38□□□□□ -0.27
SSBP1-202ENST00000461433 CYP4F22Q6NT55 531 aa13.38□□□□□ -0.27
SSBP1-202ENST00000461433 CCDC84Q86UT8 332 aaPredicted RBP13.38□□□□□ -0.27
SSBP1-202ENST00000461433 CCDC17Q96LX7 622 aa13.38□□□□□ -0.27
SSBP1-202ENST00000461433 MKNK2Q9HBH9 465 aa13.38□□□□□ -0.27
SSBP1-202ENST00000461433 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.38□□□□□ -0.27
SSBP1-202ENST00000461433 ZBTB21Q9ULJ3 1066 aa13.38□□□□□ -0.27
SSBP1-202ENST00000461433 NEDD4P46934 1319 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 EPB41L2O43491 1005 aaKnown RBP13.37□□□□□ -0.27
SSBP1-202ENST00000461433 ASNSP08243 561 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 SLC10A3P09131 477 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 PCP11498 1178 aaKnown RBP13.37□□□□□ -0.27
SSBP1-202ENST00000461433 STOX1Q6ZVD7 989 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 ERO1BQ86YB8 467 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 OPTNQ96CV9 577 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 WNK4Q96J92 1243 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 ZNF287Q9HBT7 754 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 GINM1Q9NU53 330 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 SEPT2Q15019 361 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 FAM47AQ5JRC9 791 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 SPRYD7Q5W111 196 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 MFSD6Q6ZSS7 791 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 SIAH1Q8IUQ4 282 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 ZNF444Q8N0Y2 327 aaPredicted RBP13.37□□□□□ -0.27
SSBP1-202ENST00000461433 KCNB2Q92953 911 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 PICK1Q9NRD5 415 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 ZHX2Q9Y6X8 837 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 PTPRFP10586 1907 aa13.37□□□□□ -0.27
SSBP1-202ENST00000461433 IGKV6D-41A0A0C4DH26 115 aa13.36□□□□□ -0.27
SSBP1-202ENST00000461433 USP17L5A8MUK1 530 aa13.36□□□□□ -0.27
SSBP1-202ENST00000461433 E7EWF7 191 aa13.36□□□□□ -0.27
SSBP1-202ENST00000461433 HSPA4P34932 840 aa13.36□□□□□ -0.27
SSBP1-202ENST00000461433 TFAP4Q01664 338 aa13.36□□□□□ -0.27
SSBP1-202ENST00000461433 PPATQ06203 517 aa13.36□□□□□ -0.27
SSBP1-202ENST00000461433 TMEM179Q6ZVK1 233 aa13.36□□□□□ -0.27
SSBP1-202ENST00000461433 RASEFQ8IZ41 740 aa13.36□□□□□ -0.27
SSBP1-202ENST00000461433 DNAJC5GQ8N7S2 189 aa13.36□□□□□ -0.27
SSBP1-202ENST00000461433 CCDC102AQ96A19 550 aa13.36□□□□□ -0.27
SSBP1-202ENST00000461433 OTUD5Q96G74 571 aa13.36□□□□□ -0.27
SSBP1-202ENST00000461433 RNF41Q9H4P4 317 aaPredicted RBP13.36□□□□□ -0.27
SSBP1-202ENST00000461433 AFG3L2Q9Y4W6 797 aa13.36□□□□□ -0.27
SSBP1-202ENST00000461433 MPHOSPH10O00566 681 aaKnown RBP13.35□□□□□ -0.27
SSBP1-202ENST00000461433 IRF6O14896 467 aa13.35□□□□□ -0.27
SSBP1-202ENST00000461433 ZBTB48P10074 688 aaPredicted RBP13.35□□□□□ -0.27
SSBP1-202ENST00000461433 VEGFBP49765 207 aa13.35□□□□□ -0.27
SSBP1-202ENST00000461433 PPIL2Q13356 520 aa13.35□□□□□ -0.27
SSBP1-202ENST00000461433 COL9A3Q14050 684 aaPredicted RBP13.35□□□□□ -0.27
SSBP1-202ENST00000461433 RAB3GAP1Q15042 981 aa13.35□□□□□ -0.27
SSBP1-202ENST00000461433 TSGA10IPQ3SY00 556 aa13.35□□□□□ -0.27
SSBP1-202ENST00000461433 RRP12Q5JTH9 1297 aaKnown RBP13.35□□□□□ -0.27
SSBP1-202ENST00000461433 CLEC10AQ8IUN9 316 aa13.35□□□□□ -0.27
SSBP1-202ENST00000461433 NEDD1Q8NHV4 660 aa13.35□□□□□ -0.27
SSBP1-202ENST00000461433 CAPNS2Q96L46 248 aa13.35□□□□□ -0.27
SSBP1-202ENST00000461433 ZIC5Q96T25 663 aa13.35□□□□□ -0.27
SSBP1-202ENST00000461433 CABP5Q9NP86 173 aa13.35□□□□□ -0.27
SSBP1-202ENST00000461433 IL17RBQ9NRM6 502 aa13.35□□□□□ -0.27
SSBP1-202ENST00000461433 PLIN4Q96Q06 1357 aa13.35□□□□□ -0.27
SSBP1-202ENST00000461433 B4E1Z4 1266 aa13.34□□□□□ -0.27
SSBP1-202ENST00000461433 RANBP6O60518 1105 aaKnown RBP13.34□□□□□ -0.27
SSBP1-202ENST00000461433 MKRN3Q13064 507 aaKnown RBP13.34□□□□□ -0.27
SSBP1-202ENST00000461433 MS4A4AQ96JQ5 239 aa13.34□□□□□ -0.27
SSBP1-202ENST00000461433 WDR18Q9BV38 432 aa13.34□□□□□ -0.27
SSBP1-202ENST00000461433 ZSWIM5Q9P217 1185 aa13.34□□□□□ -0.27
SSBP1-202ENST00000461433 KCNH4Q9UQ05 1017 aa13.34□□□□□ -0.27
SSBP1-202ENST00000461433 WDR33Q9C0J8 1336 aaKnown RBP13.34□□□□□ -0.27
SSBP1-202ENST00000461433 THSD7BQ9C0I4 1608 aa13.34□□□□□ -0.27
SSBP1-202ENST00000461433 A0A1W2PRG0 241 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms