RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 SLC30A3Q99726 388 aa10.56□□□□□ -0.72
ECHDC1-212ENST00000461239 ADAMTS7Q9UKP4 1686 aa10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 PHF20L1A8MW92 1017 aa10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 RNMTO43148 476 aaKnown RBP10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 EDN3P14138 238 aa10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 NFKB1P19838 968 aa10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 ST13P50502 369 aaKnown RBP10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 TAF1CQ15572 869 aaPredicted RBP10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 IL17REQ8NFR9 667 aa10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 KIFC2Q96AC6 838 aa10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 GMCL1Q96IK5 515 aa10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 TRIM47Q96LD4 638 aa10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 TINF2Q9BSI4 451 aa10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 EFCC1Q9HA90 598 aa10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 SENP2Q9HC62 589 aa10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 LRRC4BQ9NT99 713 aa10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 ITGB4P16144 1822 aa10.55□□□□□ -0.72
ECHDC1-212ENST00000461239 ERVV-2B6SEH9 535 aa10.54□□□□□ -0.72
ECHDC1-212ENST00000461239 KIF4AO95239 1232 aa10.54□□□□□ -0.72
ECHDC1-212ENST00000461239 HOXD8P13378 290 aaPredicted RBP10.54□□□□□ -0.72
ECHDC1-212ENST00000461239 ITGA6P23229 1130 aa10.54□□□□□ -0.72
ECHDC1-212ENST00000461239 SOX18P35713 384 aa10.54□□□□□ -0.72
ECHDC1-212ENST00000461239 TXNRD1Q16881 649 aa10.54□□□□□ -0.72
ECHDC1-212ENST00000461239 C1orf141Q5JVX7 400 aa10.54□□□□□ -0.72
ECHDC1-212ENST00000461239 CCDC146Q8IYE0 955 aa10.54□□□□□ -0.72
ECHDC1-212ENST00000461239 C3orf58Q8NDZ4 430 aa10.54□□□□□ -0.72
ECHDC1-212ENST00000461239 PNISRQ8TF01 805 aaKnown RBP10.54□□□□□ -0.72
ECHDC1-212ENST00000461239 TLR7Q9NYK1 1049 aaKnown RBP10.54□□□□□ -0.72
ECHDC1-212ENST00000461239 ASAP1Q9ULH1 1129 aa10.54□□□□□ -0.72
ECHDC1-212ENST00000461239 KAT6BQ8WYB5 2073 aa10.54□□□□□ -0.72
ECHDC1-212ENST00000461239 RREB1Q92766 1687 aa10.53□□□□□ -0.72
ECHDC1-212ENST00000461239 MAP3K6O95382 1288 aa10.53□□□□□ -0.72
ECHDC1-212ENST00000461239 HSP90AB1P08238 724 aaKnown RBP10.53□□□□□ -0.72
ECHDC1-212ENST00000461239 CD33P20138 364 aa10.53□□□□□ -0.72
ECHDC1-212ENST00000461239 COL13A1Q5TAT6 717 aaPredicted RBP10.53□□□□□ -0.72
ECHDC1-212ENST00000461239 PRPF40BQ6NWY9 871 aaKnown RBP10.53□□□□□ -0.72
ECHDC1-212ENST00000461239 CNTNAP3BQ96NU0 1288 aa10.53□□□□□ -0.72
ECHDC1-212ENST00000461239 PNMA5Q96PV4 448 aa10.53□□□□□ -0.72
ECHDC1-212ENST00000461239 CNTNAP3Q9BZ76 1288 aa10.53□□□□□ -0.72
ECHDC1-212ENST00000461239 ATG3Q9NT62 314 aa10.53□□□□□ -0.72
ECHDC1-212ENST00000461239 ATXN7L1Q9ULK2 861 aaPredicted RBP10.53□□□□□ -0.72
ECHDC1-212ENST00000461239 CEMIPQ8WUJ3 1361 aa10.52□□□□□ -0.72
ECHDC1-212ENST00000461239 MAP3K5Q99683 1374 aa10.52□□□□□ -0.72
ECHDC1-212ENST00000461239 RGPD3A6NKT7 1758 aaPredicted RBP10.52□□□□□ -0.72
ECHDC1-212ENST00000461239 RGPD4Q7Z3J3 1758 aa10.52□□□□□ -0.72
ECHDC1-212ENST00000461239 SCN11AQ9UI33 1791 aa10.52□□□□□ -0.72
ECHDC1-212ENST00000461239 GNAT3A8MTJ3 354 aa10.52□□□□□ -0.73
ECHDC1-212ENST00000461239 DCTN1Q14203 1278 aa10.52□□□□□ -0.73
ECHDC1-212ENST00000461239 ZNF394Q53GI3 561 aa10.52□□□□□ -0.73
ECHDC1-212ENST00000461239 HS2ST1Q7LGA3 356 aa10.52□□□□□ -0.73
ECHDC1-212ENST00000461239 RAB44Q7Z6P3 723 aaPredicted RBP10.52□□□□□ -0.73
ECHDC1-212ENST00000461239 GTPBP3Q969Y2 492 aaKnown RBP10.52□□□□□ -0.73
ECHDC1-212ENST00000461239 DRC1Q96MC2 740 aa10.52□□□□□ -0.73
ECHDC1-212ENST00000461239 EHD4Q9H223 541 aa10.52□□□□□ -0.73
ECHDC1-212ENST00000461239 ACBD3Q9H3P7 528 aa10.52□□□□□ -0.73
ECHDC1-212ENST00000461239 CCSER2Q9H7U1 834 aa10.52□□□□□ -0.73
ECHDC1-212ENST00000461239 SLC52A2Q9HAB3 445 aa10.52□□□□□ -0.73
ECHDC1-212ENST00000461239 TMOD3Q9NYL9 352 aa10.52□□□□□ -0.73
ECHDC1-212ENST00000461239 DDX41Q9UJV9 622 aaKnown RBP10.52□□□□□ -0.73
ECHDC1-212ENST00000461239 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.52□□□□□ -0.73
ECHDC1-212ENST00000461239 MRC1P22897 1456 aa10.52□□□□□ -0.73
ECHDC1-212ENST00000461239 NUP188Q5SRE5 1749 aa10.52□□□□□ -0.73
ECHDC1-212ENST00000461239 PSAPP07602 524 aa10.51□□□□□ -0.73
ECHDC1-212ENST00000461239 GSTT1P30711 240 aa10.51□□□□□ -0.73
ECHDC1-212ENST00000461239 CABP4P57796 275 aa10.51□□□□□ -0.73
ECHDC1-212ENST00000461239 RACK1P63244 317 aaKnown RBP10.51□□□□□ -0.73
ECHDC1-212ENST00000461239 WDR43Q15061 677 aaKnown RBP eCLIP10.51□□□□□ -0.73
ECHDC1-212ENST00000461239 NFE2L2Q16236 605 aa10.51□□□□□ -0.73
ECHDC1-212ENST00000461239 MCM10Q7L590 875 aa10.51□□□□□ -0.73
ECHDC1-212ENST00000461239 BHMTQ93088 406 aa10.51□□□□□ -0.73
ECHDC1-212ENST00000461239 GMPR2Q9P2T1 348 aaKnown RBP10.51□□□□□ -0.73
ECHDC1-212ENST00000461239 PCDHGB7Q9Y5F8 929 aa10.51□□□□□ -0.73
ECHDC1-212ENST00000461239 PALLDQ8WX93 1383 aa10.51□□□□□ -0.73
ECHDC1-212ENST00000461239 LY75O60449 1722 aa10.5□□□□□ -0.73
ECHDC1-212ENST00000461239 ACPPP15309 386 aa10.5□□□□□ -0.73
ECHDC1-212ENST00000461239 TMPOP42166 694 aaKnown RBP10.5□□□□□ -0.73
ECHDC1-212ENST00000461239 DIEXFQ68CQ4 756 aaKnown RBP10.5□□□□□ -0.73
ECHDC1-212ENST00000461239 RUNDC1Q96C34 613 aa10.5□□□□□ -0.73
ECHDC1-212ENST00000461239 TCF12Q99081 682 aa10.5□□□□□ -0.73
ECHDC1-212ENST00000461239 SRA1Q9HD15 236 aaKnown RBP10.5□□□□□ -0.73
ECHDC1-212ENST00000461239 ABCB6Q9NP58 842 aa10.5□□□□□ -0.73
ECHDC1-212ENST00000461239 PAPPAQ13219 1627 aa10.5□□□□□ -0.73
ECHDC1-212ENST00000461239 VIRMAQ69YN4 1812 aaKnown RBP10.49□□□□□ -0.73
ECHDC1-212ENST00000461239 FGFR3P22607 806 aa10.49□□□□□ -0.73
ECHDC1-212ENST00000461239 TNNI2P48788 182 aa10.49□□□□□ -0.73
ECHDC1-212ENST00000461239 PLAURQ03405 335 aa10.49□□□□□ -0.73
ECHDC1-212ENST00000461239 SLC39A6Q13433 755 aa10.49□□□□□ -0.73
ECHDC1-212ENST00000461239 DHX32Q7L7V1 743 aaKnown RBP10.49□□□□□ -0.73
ECHDC1-212ENST00000461239 ERMP1Q7Z2K6 904 aa10.49□□□□□ -0.73
ECHDC1-212ENST00000461239 USP48Q86UV5 1035 aa10.49□□□□□ -0.73
ECHDC1-212ENST00000461239 CEP120Q8N960 986 aa10.49□□□□□ -0.73
ECHDC1-212ENST00000461239 ZKSCAN3Q9BRR0 538 aa10.49□□□□□ -0.73
ECHDC1-212ENST00000461239 THUMPD2Q9BTF0 503 aaKnown RBP10.49□□□□□ -0.73
ECHDC1-212ENST00000461239 GGT7Q9UJ14 662 aa10.49□□□□□ -0.73
ECHDC1-212ENST00000461239 RRP7AQ9Y3A4 280 aaKnown RBP10.49□□□□□ -0.73
ECHDC1-212ENST00000461239 DLG5Q8TDM6 1919 aa10.48□□□□□ -0.73
ECHDC1-212ENST00000461239 SIPA1L3O60292 1781 aaPredicted RBP10.48□□□□□ -0.73
ECHDC1-212ENST00000461239 LOC102724428A0A0B4J2F2 783 aa10.48□□□□□ -0.73
ECHDC1-212ENST00000461239 KCNQ3O43525 872 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms