RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 CCDC84Q86UT8 332 aaPredicted RBP17.88■□□□□ 0.45
DNMT3A-207ENST00000461228 TRIB2Q92519 343 aa17.88■□□□□ 0.45
DNMT3A-207ENST00000461228 C12orf42Q96LP6 360 aa17.88■□□□□ 0.45
DNMT3A-207ENST00000461228 TMOD4Q9NZQ9 345 aa17.88■□□□□ 0.45
DNMT3A-207ENST00000461228 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.88■□□□□ 0.45
DNMT3A-207ENST00000461228 LTBP2Q14767 1821 aa17.88■□□□□ 0.45
DNMT3A-207ENST00000461228 SLURP2P0DP57 97 aa17.87■□□□□ 0.45
DNMT3A-207ENST00000461228 HERVK_113P62684 666 aa17.87■□□□□ 0.45
DNMT3A-207ENST00000461228 RRP1BQ14684 758 aaKnown RBP17.87■□□□□ 0.45
DNMT3A-207ENST00000461228 FOXP4Q8IVH2 680 aaPredicted RBP17.87■□□□□ 0.45
DNMT3A-207ENST00000461228 DIS3LQ8TF46 1054 aaKnown RBP17.87■□□□□ 0.45
DNMT3A-207ENST00000461228 NEUROD6Q96NK8 337 aa17.87■□□□□ 0.45
DNMT3A-207ENST00000461228 NUDT12Q9BQG2 462 aa17.87■□□□□ 0.45
DNMT3A-207ENST00000461228 EHD4Q9H223 541 aa17.87■□□□□ 0.45
DNMT3A-207ENST00000461228 LRP2BPQ9P2M1 347 aa17.87■□□□□ 0.45
DNMT3A-207ENST00000461228 ZBTB21Q9ULJ3 1066 aa17.87■□□□□ 0.45
DNMT3A-207ENST00000461228 MYH8P13535 1937 aa17.87■□□□□ 0.45
DNMT3A-207ENST00000461228 COL6A1P12109 1028 aa17.86■□□□□ 0.45
DNMT3A-207ENST00000461228 POLA2Q14181 598 aa17.86■□□□□ 0.45
DNMT3A-207ENST00000461228 NAA16Q6N069 864 aaPredicted RBP17.86■□□□□ 0.45
DNMT3A-207ENST00000461228 GPRC5AQ8NFJ5 357 aa17.86■□□□□ 0.45
DNMT3A-207ENST00000461228 SH3RF3Q8TEJ3 882 aaPredicted RBP17.86■□□□□ 0.45
DNMT3A-207ENST00000461228 USP6NLQ92738 828 aa17.86■□□□□ 0.45
DNMT3A-207ENST00000461228 APBA2Q99767 749 aa17.86■□□□□ 0.45
DNMT3A-207ENST00000461228 C11orf49Q9H6J7 331 aa17.86■□□□□ 0.45
DNMT3A-207ENST00000461228 PARP14Q460N5 1801 aa17.86■□□□□ 0.45
DNMT3A-207ENST00000461228 PNMA6EA0A0J9YXQ4 647 aa17.85■□□□□ 0.45
DNMT3A-207ENST00000461228 USP17L10C9JJH3 530 aa17.85■□□□□ 0.45
DNMT3A-207ENST00000461228 PRKAR2AP13861 404 aaKnown RBP17.85■□□□□ 0.45
DNMT3A-207ENST00000461228 G3BP1Q13283 466 aaKnown RBP eCLIP17.85■□□□□ 0.45
DNMT3A-207ENST00000461228 PDE3AQ14432 1141 aa17.85■□□□□ 0.45
DNMT3A-207ENST00000461228 TNNI3KQ59H18 835 aa17.85■□□□□ 0.45
DNMT3A-207ENST00000461228 LBX2Q6XYB7 198 aa17.85■□□□□ 0.45
DNMT3A-207ENST00000461228 TBC1D9Q6ZT07 1266 aa17.85■□□□□ 0.45
DNMT3A-207ENST00000461228 TAOK2Q9UL54 1235 aa17.85■□□□□ 0.45
DNMT3A-207ENST00000461228 FPGT-TNNI3KV9GXZ4 949 aa17.85■□□□□ 0.45
DNMT3A-207ENST00000461228 PFASO15067 1338 aa17.84■□□□□ 0.45
DNMT3A-207ENST00000461228 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
DNMT3A-207ENST00000461228 SOX1O00570 391 aaPredicted RBP17.84■□□□□ 0.45
DNMT3A-207ENST00000461228 HLA-DOAP06340 250 aa17.84■□□□□ 0.45
DNMT3A-207ENST00000461228 ZKSCAN1P17029 563 aaPredicted RBP17.84■□□□□ 0.45
DNMT3A-207ENST00000461228 ERVK-9P63128 1117 aa17.84■□□□□ 0.45
DNMT3A-207ENST00000461228 ERVK-24P63145 666 aa17.84■□□□□ 0.45
DNMT3A-207ENST00000461228 CCDC158Q5M9N0 1113 aa17.84■□□□□ 0.45
DNMT3A-207ENST00000461228 SSH3Q8TE77 659 aa17.84■□□□□ 0.45
DNMT3A-207ENST00000461228 AATFQ9NY61 560 aaKnown RBP eCLIP17.84■□□□□ 0.45
DNMT3A-207ENST00000461228 RLFQ13129 1914 aa17.84■□□□□ 0.45
DNMT3A-207ENST00000461228 RGS2P41220 211 aa17.83■□□□□ 0.44
DNMT3A-207ENST00000461228 MORN1Q5T089 497 aa17.83■□□□□ 0.44
DNMT3A-207ENST00000461228 TDHQ8IZJ6 230 aa17.83■□□□□ 0.44
DNMT3A-207ENST00000461228 CDH23Q9H251 3354 aa17.83■□□□□ 0.44
DNMT3A-207ENST00000461228 CYP2E1P05181 493 aaPredicted RBP17.82■□□□□ 0.44
DNMT3A-207ENST00000461228 TTC39AQ5SRH9 613 aa17.82■□□□□ 0.44
DNMT3A-207ENST00000461228 TATDN1Q6P1N9 297 aa17.82■□□□□ 0.44
DNMT3A-207ENST00000461228 ADGRA1Q86SQ6 560 aa17.82■□□□□ 0.44
DNMT3A-207ENST00000461228 C7orf61Q8IZ16 206 aa17.82■□□□□ 0.44
DNMT3A-207ENST00000461228 CRACR2BQ8N4Y2 399 aaPredicted RBP17.82■□□□□ 0.44
DNMT3A-207ENST00000461228 TRIM34Q9BYJ4 488 aa17.82■□□□□ 0.44
DNMT3A-207ENST00000461228 TXNRD2Q9NNW7 524 aa17.82■□□□□ 0.44
DNMT3A-207ENST00000461228 STAP2Q9UGK3 403 aa17.82■□□□□ 0.44
DNMT3A-207ENST00000461228 MSCO60682 206 aa17.81■□□□□ 0.44
DNMT3A-207ENST00000461228 HOXC6P09630 235 aa17.81■□□□□ 0.44
DNMT3A-207ENST00000461228 USP14P54578 494 aa17.81■□□□□ 0.44
DNMT3A-207ENST00000461228 CCNA1P78396 465 aa17.81■□□□□ 0.44
DNMT3A-207ENST00000461228 USP17L2Q6R6M4 530 aa17.81■□□□□ 0.44
DNMT3A-207ENST00000461228 GPR142Q7Z601 462 aa17.81■□□□□ 0.44
DNMT3A-207ENST00000461228 TGFBRAP1Q8WUH2 860 aa17.81■□□□□ 0.44
DNMT3A-207ENST00000461228 RBPJLQ9UBG7 517 aa17.81■□□□□ 0.44
DNMT3A-207ENST00000461228 NOP58Q9Y2X3 529 aaKnown RBP17.81■□□□□ 0.44
DNMT3A-207ENST00000461228 RABGAP1Q9Y3P9 1069 aa17.81■□□□□ 0.44
DNMT3A-207ENST00000461228 TRIM32Q13049 653 aa17.8■□□□□ 0.44
DNMT3A-207ENST00000461228 LRCH3Q96II8 777 aa17.8■□□□□ 0.44
DNMT3A-207ENST00000461228 P2RX7Q99572 595 aaKnown RBP17.8■□□□□ 0.44
DNMT3A-207ENST00000461228 KIAA1683Q9H0B3 1180 aa17.8■□□□□ 0.44
DNMT3A-207ENST00000461228 VCANP13611 3396 aa17.8■□□□□ 0.44
DNMT3A-207ENST00000461228 GLRX3O76003 335 aaKnown RBP17.79■□□□□ 0.44
DNMT3A-207ENST00000461228 MAGEA10P43363 369 aaPredicted RBP17.79■□□□□ 0.44
DNMT3A-207ENST00000461228 JAG1P78504 1218 aa17.79■□□□□ 0.44
DNMT3A-207ENST00000461228 LHX8Q68G74 356 aa17.79■□□□□ 0.44
DNMT3A-207ENST00000461228 PLEKHH3Q7Z736 793 aa17.79■□□□□ 0.44
DNMT3A-207ENST00000461228 MAPKAPK5Q8IW41 473 aa17.79■□□□□ 0.44
DNMT3A-207ENST00000461228 DBNDD2Q9BQY9 259 aa17.79■□□□□ 0.44
DNMT3A-207ENST00000461228 EMILIN3Q9NT22 766 aa17.79■□□□□ 0.44
DNMT3A-207ENST00000461228 SERPINB13Q9UIV8 391 aa17.79■□□□□ 0.44
DNMT3A-207ENST00000461228 DBNLQ9UJU6 430 aaKnown RBP17.79■□□□□ 0.44
DNMT3A-207ENST00000461228 STXBP5LQ9Y2K9 1186 aa17.79■□□□□ 0.44
DNMT3A-207ENST00000461228 MYH7P12883 1935 aa17.78■□□□□ 0.44
DNMT3A-207ENST00000461228 EYSQ5T1H1 3165 aa17.78■□□□□ 0.44
DNMT3A-207ENST00000461228 IGHA2P01877 340 aa17.78■□□□□ 0.44
DNMT3A-207ENST00000461228 CYP2B6P20813 491 aa17.78■□□□□ 0.44
DNMT3A-207ENST00000461228 CACNB2Q08289 660 aaPredicted RBP17.78■□□□□ 0.44
DNMT3A-207ENST00000461228 MAP2K5Q13163 448 aa17.78■□□□□ 0.44
DNMT3A-207ENST00000461228 PORCNQ9H237 461 aa17.78■□□□□ 0.44
DNMT3A-207ENST00000461228 PALD1Q9ULE6 856 aa17.78■□□□□ 0.44
DNMT3A-207ENST00000461228 ROBO3Q96MS0 1386 aa17.78■□□□□ 0.44
DNMT3A-207ENST00000461228 USP17L15C9J2P7 530 aa17.77■□□□□ 0.44
DNMT3A-207ENST00000461228 USP17L13C9JLJ4 530 aa17.77■□□□□ 0.44
DNMT3A-207ENST00000461228 USP17L11C9JVI0 530 aa17.77■□□□□ 0.44
DNMT3A-207ENST00000461228 USP17L18D6R9N7 530 aa17.77■□□□□ 0.44
DNMT3A-207ENST00000461228 USP17L22D6RA61 530 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms