RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 HERC5Q9UII4 1024 aaKnown RBP17.11■□□□□ 0.33
COL5A3-202ENST00000461214 PALD1Q9ULE6 856 aa17.11■□□□□ 0.33
COL5A3-202ENST00000461214 COLQQ9Y215 455 aaPredicted RBP17.11■□□□□ 0.33
COL5A3-202ENST00000461214 DLL1O00548 723 aa17.1■□□□□ 0.33
COL5A3-202ENST00000461214 HSPA4P34932 840 aa17.1■□□□□ 0.33
COL5A3-202ENST00000461214 NECTIN1Q15223 517 aa17.1■□□□□ 0.33
COL5A3-202ENST00000461214 ZFPM1Q8IX07 1006 aa17.1■□□□□ 0.33
COL5A3-202ENST00000461214 R3HDMLQ9H3Y0 253 aa17.1■□□□□ 0.33
COL5A3-202ENST00000461214 ZNF287Q9HBT7 754 aa17.1■□□□□ 0.33
COL5A3-202ENST00000461214 SWAP70Q9UH65 585 aa17.1■□□□□ 0.33
COL5A3-202ENST00000461214 SERPINB13Q9UIV8 391 aa17.1■□□□□ 0.33
COL5A3-202ENST00000461214 ZNF213O14771 459 aa17.09■□□□□ 0.33
COL5A3-202ENST00000461214 TBC1D12O60347 775 aa17.09■□□□□ 0.33
COL5A3-202ENST00000461214 NF2P35240 595 aa17.09■□□□□ 0.33
COL5A3-202ENST00000461214 SUPT20HL1Q3ZLR7 823 aa17.09■□□□□ 0.33
COL5A3-202ENST00000461214 DCAF15Q66K64 600 aa17.09■□□□□ 0.33
COL5A3-202ENST00000461214 C16orf86Q6ZW13 317 aa17.09■□□□□ 0.33
COL5A3-202ENST00000461214 RNF41Q9H4P4 317 aaPredicted RBP17.09■□□□□ 0.33
COL5A3-202ENST00000461214 TRIM17Q9Y577 477 aa17.09■□□□□ 0.33
COL5A3-202ENST00000461214 LOC285556D6RIA3 1793 aa17.09■□□□□ 0.33
COL5A3-202ENST00000461214 MINDY4BA8MYZ0 360 aa17.08■□□□□ 0.32
COL5A3-202ENST00000461214 SEC24BO95487 1268 aa17.08■□□□□ 0.32
COL5A3-202ENST00000461214 CYP21A2P08686 494 aa17.08■□□□□ 0.32
COL5A3-202ENST00000461214 PLCD1P51178 756 aa17.08■□□□□ 0.32
COL5A3-202ENST00000461214 FKBP1BP68106 108 aa17.08■□□□□ 0.32
COL5A3-202ENST00000461214 GABPAQ06546 454 aa17.08■□□□□ 0.32
COL5A3-202ENST00000461214 PRAMEF18Q5VWM3 479 aa17.08■□□□□ 0.32
COL5A3-202ENST00000461214 CREB3L3Q68CJ9 461 aa17.08■□□□□ 0.32
COL5A3-202ENST00000461214 FOXP4Q8IVH2 680 aaPredicted RBP17.08■□□□□ 0.32
COL5A3-202ENST00000461214 CRACR2BQ8N4Y2 399 aaPredicted RBP17.08■□□□□ 0.32
COL5A3-202ENST00000461214 STAG1Q8WVM7 1258 aa17.08■□□□□ 0.32
COL5A3-202ENST00000461214 KCNB2Q92953 911 aa17.08■□□□□ 0.32
COL5A3-202ENST00000461214 TRIM34Q9BYJ4 488 aa17.08■□□□□ 0.32
COL5A3-202ENST00000461214 PARP14Q460N5 1801 aa17.07■□□□□ 0.32
COL5A3-202ENST00000461214 PLIN4Q96Q06 1357 aa17.07■□□□□ 0.32
COL5A3-202ENST00000461214 CYP2D7A0A087X1C5 515 aa17.07■□□□□ 0.32
COL5A3-202ENST00000461214 SLC27A2O14975 620 aa17.07■□□□□ 0.32
COL5A3-202ENST00000461214 CYP2D6P10635 497 aa17.07■□□□□ 0.32
COL5A3-202ENST00000461214 ZKSCAN1P17029 563 aaPredicted RBP17.07■□□□□ 0.32
COL5A3-202ENST00000461214 EN2P19622 333 aaPredicted RBP17.07■□□□□ 0.32
COL5A3-202ENST00000461214 ANAPC15P60006 121 aa17.07■□□□□ 0.32
COL5A3-202ENST00000461214 MAP3K10Q02779 954 aa17.07■□□□□ 0.32
COL5A3-202ENST00000461214 PDE4BQ07343 736 aa17.07■□□□□ 0.32
COL5A3-202ENST00000461214 TSGA10IPQ3SY00 556 aa17.07■□□□□ 0.32
COL5A3-202ENST00000461214 NBPF3Q9H094 633 aa17.07■□□□□ 0.32
COL5A3-202ENST00000461214 CNNM2Q9H8M5 875 aa17.07■□□□□ 0.32
COL5A3-202ENST00000461214 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.07■□□□□ 0.32
COL5A3-202ENST00000461214 ORC4O43929 436 aa17.06■□□□□ 0.32
COL5A3-202ENST00000461214 FGRP09769 529 aa17.06■□□□□ 0.32
COL5A3-202ENST00000461214 TM4SF4P48230 202 aa17.06■□□□□ 0.32
COL5A3-202ENST00000461214 HAND2P61296 217 aa17.06■□□□□ 0.32
COL5A3-202ENST00000461214 KRT32Q14532 448 aa17.06■□□□□ 0.32
COL5A3-202ENST00000461214 AKNAD1Q5T1N1 836 aa17.06■□□□□ 0.32
COL5A3-202ENST00000461214 NBPF12Q5TAG4 269 aaPredicted RBP17.06■□□□□ 0.32
COL5A3-202ENST00000461214 TBC1D10CQ8IV04 446 aa17.06■□□□□ 0.32
COL5A3-202ENST00000461214 CDAN1Q8IWY9 1227 aa17.06■□□□□ 0.32
COL5A3-202ENST00000461214 IL17RAQ96F46 866 aa17.06■□□□□ 0.32
COL5A3-202ENST00000461214 DNAJC18Q9H819 358 aa17.06■□□□□ 0.32
COL5A3-202ENST00000461214 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.06■□□□□ 0.32
COL5A3-202ENST00000461214 SLC4A8Q2Y0W8 1093 aa17.05■□□□□ 0.32
COL5A3-202ENST00000461214 NOM1Q5C9Z4 860 aaKnown RBP17.05■□□□□ 0.32
COL5A3-202ENST00000461214 ZNF341Q9BYN7 854 aa17.05■□□□□ 0.32
COL5A3-202ENST00000461214 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.05■□□□□ 0.32
COL5A3-202ENST00000461214 MYH6P13533 1939 aa17.05■□□□□ 0.32
COL5A3-202ENST00000461214 RBM25P49756 843 aaKnown RBP17.04■□□□□ 0.32
COL5A3-202ENST00000461214 EVX2Q03828 476 aa17.04■□□□□ 0.32
COL5A3-202ENST00000461214 CTDSPL2Q05D32 466 aa17.04■□□□□ 0.32
COL5A3-202ENST00000461214 SREBF2Q12772 1141 aa17.04■□□□□ 0.32
COL5A3-202ENST00000461214 TATDN1Q6P1N9 297 aa17.04■□□□□ 0.32
COL5A3-202ENST00000461214 MFSD6Q6ZSS7 791 aa17.04■□□□□ 0.32
COL5A3-202ENST00000461214 OTOP1Q7RTM1 612 aa17.04■□□□□ 0.32
COL5A3-202ENST00000461214 NEDD4P46934 1319 aa17.03■□□□□ 0.32
COL5A3-202ENST00000461214 PPP1R12BO60237 982 aaPredicted RBP17.03■□□□□ 0.32
COL5A3-202ENST00000461214 SHMT1P34896 483 aa17.03■□□□□ 0.32
COL5A3-202ENST00000461214 CDK8P49336 464 aa17.03■□□□□ 0.32
COL5A3-202ENST00000461214 TRDNQ13061 729 aa17.03■□□□□ 0.32
COL5A3-202ENST00000461214 PRKG1Q13976 671 aa17.03■□□□□ 0.32
COL5A3-202ENST00000461214 SLC17A8Q8NDX2 589 aa17.03■□□□□ 0.32
COL5A3-202ENST00000461214 CCDC17Q96LX7 622 aa17.03■□□□□ 0.32
COL5A3-202ENST00000461214 C22orf23Q9BZE7 217 aa17.03■□□□□ 0.32
COL5A3-202ENST00000461214 KRT23Q9C075 422 aa17.03■□□□□ 0.32
COL5A3-202ENST00000461214 GINM1Q9NU53 330 aa17.03■□□□□ 0.32
COL5A3-202ENST00000461214 E7EWF7 191 aa17.02■□□□□ 0.32
COL5A3-202ENST00000461214 RASA1P20936 1047 aa17.02■□□□□ 0.32
COL5A3-202ENST00000461214 MAP3K11Q16584 847 aa17.02■□□□□ 0.32
COL5A3-202ENST00000461214 RALYLQ86SE5 291 aaKnown RBP17.02■□□□□ 0.32
COL5A3-202ENST00000461214 SLC44A5Q8NCS7 719 aa17.02■□□□□ 0.32
COL5A3-202ENST00000461214 NCOA7Q8NI08 942 aa17.02■□□□□ 0.32
COL5A3-202ENST00000461214 DYNLL2Q96FJ2 89 aa17.02■□□□□ 0.32
COL5A3-202ENST00000461214 TBC1D32Q96NH3 1257 aa17.02■□□□□ 0.32
COL5A3-202ENST00000461214 MKNK2Q9HBH9 465 aa17.02■□□□□ 0.32
COL5A3-202ENST00000461214 SNX14Q9Y5W7 946 aa17.02■□□□□ 0.32
COL5A3-202ENST00000461214 WDR19Q8NEZ3 1342 aa17.01■□□□□ 0.31
COL5A3-202ENST00000461214 UNCXA6NJT0 531 aa17.01■□□□□ 0.31
COL5A3-202ENST00000461214 FAM196BA6NMK8 535 aa17.01■□□□□ 0.31
COL5A3-202ENST00000461214 SMIM22K7EJ46 135 aa17.01■□□□□ 0.31
COL5A3-202ENST00000461214 HMGB1P09429 215 aaKnown RBP17.01■□□□□ 0.31
COL5A3-202ENST00000461214 IREB2P48200 963 aaKnown RBP17.01■□□□□ 0.31
COL5A3-202ENST00000461214 STOX1Q6ZVD7 989 aa17.01■□□□□ 0.31
COL5A3-202ENST00000461214 RASEFQ8IZ41 740 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms