RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 PRKCZQ05513 592 aa11.74□□□□□ -0.53
CD40-203ENST00000461171 TTF1Q15361 905 aaPredicted RBP11.74□□□□□ -0.53
CD40-203ENST00000461171 FAM110CQ1W6H9 321 aa11.74□□□□□ -0.53
CD40-203ENST00000461171 PRPF38BQ5VTL8 546 aaKnown RBP11.74□□□□□ -0.53
CD40-203ENST00000461171 NBPF11Q86T75 865 aa11.74□□□□□ -0.53
CD40-203ENST00000461171 CRACR2BQ8N4Y2 399 aaPredicted RBP11.74□□□□□ -0.53
CD40-203ENST00000461171 SMCR8Q8TEV9 937 aaPredicted RBP11.74□□□□□ -0.53
CD40-203ENST00000461171 AS3MTQ9HBK9 375 aa11.74□□□□□ -0.53
CD40-203ENST00000461171 PNMA3Q9UL41 463 aa11.74□□□□□ -0.53
CD40-203ENST00000461171 MYPNQ86TC9 1320 aa11.74□□□□□ -0.53
CD40-203ENST00000461171 TCRBV5S4A2TA0A5A2 114 aa11.73□□□□□ -0.53
CD40-203ENST00000461171 GOLIM4O00461 696 aa11.73□□□□□ -0.53
CD40-203ENST00000461171 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
CD40-203ENST00000461171 GDF11O95390 407 aa11.73□□□□□ -0.53
CD40-203ENST00000461171 FMNL1O95466 1100 aaPredicted RBP11.73□□□□□ -0.53
CD40-203ENST00000461171 ATP5JP18859 108 aa11.73□□□□□ -0.53
CD40-203ENST00000461171 EN2P19622 333 aaPredicted RBP11.73□□□□□ -0.53
CD40-203ENST00000461171 HOXD10P28358 340 aa11.73□□□□□ -0.53
CD40-203ENST00000461171 BACE1P56817 501 aa11.73□□□□□ -0.53
CD40-203ENST00000461171 MTMR2Q13614 643 aa11.73□□□□□ -0.53
CD40-203ENST00000461171 SLC9C2Q5TAH2 1124 aa11.73□□□□□ -0.53
CD40-203ENST00000461171 TATDN1Q6P1N9 297 aa11.73□□□□□ -0.53
CD40-203ENST00000461171 EDC3Q96F86 508 aaKnown RBP11.73□□□□□ -0.53
CD40-203ENST00000461171 TMEM106CQ9BVX2 250 aa11.73□□□□□ -0.53
CD40-203ENST00000461171 ASCC2Q9H1I8 757 aaPredicted RBP11.73□□□□□ -0.53
CD40-203ENST00000461171 SERPINB13Q9UIV8 391 aa11.73□□□□□ -0.53
CD40-203ENST00000461171 ZNF532Q9HCE3 1301 aa11.72□□□□□ -0.53
CD40-203ENST00000461171 GRK4P32298 578 aa11.72□□□□□ -0.53
CD40-203ENST00000461171 USP5P45974 858 aa11.72□□□□□ -0.53
CD40-203ENST00000461171 GCLCP48506 637 aaPredicted RBP11.72□□□□□ -0.53
CD40-203ENST00000461171 SLC4A8Q2Y0W8 1093 aa11.72□□□□□ -0.53
CD40-203ENST00000461171 ANKRD13CQ8N6S4 541 aa11.72□□□□□ -0.53
CD40-203ENST00000461171 DNAJC2Q99543 621 aaKnown RBP11.72□□□□□ -0.53
CD40-203ENST00000461171 TRIM34Q9BYJ4 488 aa11.72□□□□□ -0.53
CD40-203ENST00000461171 DOCK3Q8IZD9 2030 aa11.72□□□□□ -0.53
CD40-203ENST00000461171 MAGEB6P1A0A0J9YX57 407 aa11.71□□□□□ -0.53
CD40-203ENST00000461171 C19orf81C9J6K1 198 aa11.71□□□□□ -0.53
CD40-203ENST00000461171 TNPO2O14787 897 aaKnown RBP11.71□□□□□ -0.53
CD40-203ENST00000461171 HOXA7P31268 230 aaPredicted RBP11.71□□□□□ -0.53
CD40-203ENST00000461171 SHMT1P34896 483 aa11.71□□□□□ -0.53
CD40-203ENST00000461171 GABPAQ06546 454 aa11.71□□□□□ -0.53
CD40-203ENST00000461171 PABPC4Q13310 644 aaKnown RBP eCLIP11.71□□□□□ -0.53
CD40-203ENST00000461171 IRF5Q13568 498 aa11.71□□□□□ -0.53
CD40-203ENST00000461171 MTFR1Q15390 333 aa11.71□□□□□ -0.53
CD40-203ENST00000461171 LCORLQ8N3X6 602 aa11.71□□□□□ -0.53
CD40-203ENST00000461171 RAET1EQ8TD07 263 aa11.71□□□□□ -0.53
CD40-203ENST00000461171 SHISA4Q96DD7 197 aa11.71□□□□□ -0.53
CD40-203ENST00000461171 HAUS7Q99871 368 aa11.71□□□□□ -0.53
CD40-203ENST00000461171 LRRCC1Q9C099 1032 aa11.71□□□□□ -0.53
CD40-203ENST00000461171 PAG1Q9NWQ8 432 aa11.71□□□□□ -0.53
CD40-203ENST00000461171 MORF4L1Q9UBU8 362 aa11.71□□□□□ -0.53
CD40-203ENST00000461171 GABRQQ9UN88 632 aa11.71□□□□□ -0.53
CD40-203ENST00000461171 USP17L10C9JJH3 530 aa11.7□□□□□ -0.54
CD40-203ENST00000461171 MYCP01106 439 aaPredicted RBP11.7□□□□□ -0.54
CD40-203ENST00000461171 GH2P01242 217 aa11.7□□□□□ -0.54
CD40-203ENST00000461171 ADD2P35612 726 aa11.7□□□□□ -0.54
CD40-203ENST00000461171 FLT3LGP49771 235 aa11.7□□□□□ -0.54
CD40-203ENST00000461171 PLCD1P51178 756 aa11.7□□□□□ -0.54
CD40-203ENST00000461171 EVX2Q03828 476 aa11.7□□□□□ -0.54
CD40-203ENST00000461171 TTC6Q86TZ1 520 aa11.7□□□□□ -0.54
CD40-203ENST00000461171 SLAIN1Q8ND83 568 aa11.7□□□□□ -0.54
CD40-203ENST00000461171 C12orf42Q96LP6 360 aa11.7□□□□□ -0.54
CD40-203ENST00000461171 CRNKL1Q9BZJ0 848 aaKnown RBP11.7□□□□□ -0.54
CD40-203ENST00000461171 BOLA2Q9H3K6 86 aa11.7□□□□□ -0.54
CD40-203ENST00000461171 DCP1AQ9NPI6 582 aaPredicted RBP11.7□□□□□ -0.54
CD40-203ENST00000461171 MYH7P12883 1935 aa11.7□□□□□ -0.54
CD40-203ENST00000461171 SLC34A2O95436 690 aa11.69□□□□□ -0.54
CD40-203ENST00000461171 SLFNL1Q499Z3 407 aa11.69□□□□□ -0.54
CD40-203ENST00000461171 PXYLP1Q8TE99 480 aa11.69□□□□□ -0.54
CD40-203ENST00000461171 SDR42E1Q8WUS8 393 aa11.69□□□□□ -0.54
CD40-203ENST00000461171 DCTPP1Q9H773 170 aa11.69□□□□□ -0.54
CD40-203ENST00000461171 EMILIN3Q9NT22 766 aa11.69□□□□□ -0.54
CD40-203ENST00000461171 TMOD4Q9NZQ9 345 aa11.69□□□□□ -0.54
CD40-203ENST00000461171 SMARCA5O60264 1052 aaPredicted RBP11.68□□□□□ -0.54
CD40-203ENST00000461171 ADCY3O60266 1144 aa11.68□□□□□ -0.54
CD40-203ENST00000461171 CHGBP05060 677 aa11.68□□□□□ -0.54
CD40-203ENST00000461171 GJB1P08034 283 aa11.68□□□□□ -0.54
CD40-203ENST00000461171 CCL5P13501 91 aa11.68□□□□□ -0.54
CD40-203ENST00000461171 GUCY1A2P33402 732 aa11.68□□□□□ -0.54
CD40-203ENST00000461171 HERVK_113P62684 666 aa11.68□□□□□ -0.54
CD40-203ENST00000461171 IRX3P78415 501 aaPredicted RBP11.68□□□□□ -0.54
CD40-203ENST00000461171 UBE3CQ15386 1083 aa11.68□□□□□ -0.54
CD40-203ENST00000461171 ABCB5Q2M3G0 1257 aa11.68□□□□□ -0.54
CD40-203ENST00000461171 POTEEQ6S8J3 1075 aa11.68□□□□□ -0.54
CD40-203ENST00000461171 UBE2Q1Q7Z7E8 422 aa11.68□□□□□ -0.54
CD40-203ENST00000461171 P2RX7Q99572 595 aaKnown RBP11.68□□□□□ -0.54
CD40-203ENST00000461171 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.68□□□□□ -0.54
CD40-203ENST00000461171 KIAA1683Q9H0B3 1180 aa11.68□□□□□ -0.54
CD40-203ENST00000461171 ARMT1Q9H993 441 aa11.68□□□□□ -0.54
CD40-203ENST00000461171 TXNRD2Q9NNW7 524 aa11.68□□□□□ -0.54
CD40-203ENST00000461171 MCM9Q9NXL9 1143 aa11.68□□□□□ -0.54
CD40-203ENST00000461171 TAOK2Q9UL54 1235 aa11.68□□□□□ -0.54
CD40-203ENST00000461171 PLXNB2O15031 1838 aa11.67□□□□□ -0.54
CD40-203ENST00000461171 PRKAB2O43741 272 aa11.67□□□□□ -0.54
CD40-203ENST00000461171 MBD4O95243 580 aa11.67□□□□□ -0.54
CD40-203ENST00000461171 INHAP05111 366 aa11.67□□□□□ -0.54
CD40-203ENST00000461171 POLR3DP05423 398 aaPredicted RBP11.67□□□□□ -0.54
CD40-203ENST00000461171 CYP2D6P10635 497 aa11.67□□□□□ -0.54
CD40-203ENST00000461171 ELNP15502 786 aa11.67□□□□□ -0.54
CD40-203ENST00000461171 GJA8P48165 433 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms