RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 FGD1P98174 961 aa6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 FMR1Q06787 632 aaKnown RBP eCLIP6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 INPP5AQ14642 412 aa6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 FBLN7Q53RD9 439 aa6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 LRFN4Q6PJG9 635 aa6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 ANKLE2Q86XL3 938 aa6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 HID1Q8IV36 788 aa6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 ANKRD24Q8TF21 1146 aa6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 LIN37Q96GY3 246 aaPredicted RBP6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 COX4I2Q96KJ9 171 aa6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 WNT10AQ9GZT5 417 aa6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 ATP13A1Q9HD20 1204 aa6.25□□□□□ -1.41
SPTLC1-203ENST00000461132 NFIBO00712 420 aa6.24□□□□□ -1.41
SPTLC1-203ENST00000461132 MESP2Q0VG99 397 aa6.24□□□□□ -1.41
SPTLC1-203ENST00000461132 WIPI1Q5MNZ9 446 aaPredicted RBP6.24□□□□□ -1.41
SPTLC1-203ENST00000461132 TTBK2Q6IQ55 1244 aa6.24□□□□□ -1.41
SPTLC1-203ENST00000461132 LETMD1Q6P1Q0 360 aa6.24□□□□□ -1.41
SPTLC1-203ENST00000461132 SYDE1Q6ZW31 735 aaPredicted RBP6.24□□□□□ -1.41
SPTLC1-203ENST00000461132 SV2BQ7L1I2 683 aa6.24□□□□□ -1.41
SPTLC1-203ENST00000461132 FRMD6Q96NE9 622 aa6.24□□□□□ -1.41
SPTLC1-203ENST00000461132 ASB16Q96NS5 453 aa6.24□□□□□ -1.41
SPTLC1-203ENST00000461132 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.24□□□□□ -1.41
SPTLC1-203ENST00000461132 ZNF865P0CJ78 1059 aaPredicted RBP6.23□□□□□ -1.41
SPTLC1-203ENST00000461132 GDNFP39905 211 aa6.23□□□□□ -1.41
SPTLC1-203ENST00000461132 C22orf34Q6ZV56 151 aa6.23□□□□□ -1.41
SPTLC1-203ENST00000461132 THAP5Q7Z6K1 395 aa6.23□□□□□ -1.41
SPTLC1-203ENST00000461132 XAGE3Q8WTP9 111 aa6.23□□□□□ -1.41
SPTLC1-203ENST00000461132 FBRSQ9HAH7 460 aa6.23□□□□□ -1.41
SPTLC1-203ENST00000461132 PRR33A8MZF0 331 aa6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 TSPAN15O95858 294 aa6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 EIF4BP23588 611 aaKnown RBP6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 KIR3DL1P43629 444 aa6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 SLBPQ14493 270 aaKnown RBP eCLIP6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 CCDC85BQ15834 202 aaPredicted RBP6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 RASIP1Q5U651 963 aa6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 FYB2Q5VWT5 728 aa6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 PRR23BQ6ZRT6 265 aa6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 FBXO15Q8NCQ5 510 aaPredicted RBP6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 UBE2FQ969M7 185 aa6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 SYTL4Q96C24 671 aaPredicted RBP6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 ALPK1Q96QP1 1244 aa6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 DIRC2Q96SL1 478 aa6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 SETDB2Q96T68 719 aa6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 SEMA3GQ9NS98 782 aa6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 SLAMF8Q9P0V8 285 aa6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 ZSWIM5Q9P217 1185 aa6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 WWC3Q9ULE0 1092 aa6.22□□□□□ -1.41
SPTLC1-203ENST00000461132 LDHBP07195 334 aaKnown RBP6.21□□□□□ -1.42
SPTLC1-203ENST00000461132 GRK4P32298 578 aa6.21□□□□□ -1.42
SPTLC1-203ENST00000461132 CAP2P40123 477 aa6.21□□□□□ -1.42
SPTLC1-203ENST00000461132 PDE4BQ07343 736 aa6.21□□□□□ -1.42
SPTLC1-203ENST00000461132 PRAMEF13Q5VWM6 474 aa6.21□□□□□ -1.42
SPTLC1-203ENST00000461132 SPOCD1Q6ZMY3 1216 aa6.21□□□□□ -1.42
SPTLC1-203ENST00000461132 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
SPTLC1-203ENST00000461132 NSUN3Q9H649 340 aaKnown RBP6.21□□□□□ -1.42
SPTLC1-203ENST00000461132 CAPN6Q9Y6Q1 641 aa6.21□□□□□ -1.42
SPTLC1-203ENST00000461132 TMEM253P0C7T8 217 aa6.2□□□□□ -1.42
SPTLC1-203ENST00000461132 ETV3P41162 512 aa6.2□□□□□ -1.42
SPTLC1-203ENST00000461132 NKG7Q16617 165 aa6.2□□□□□ -1.42
SPTLC1-203ENST00000461132 TTC6Q86TZ1 520 aa6.2□□□□□ -1.42
SPTLC1-203ENST00000461132 ABHD4Q8TB40 342 aa6.2□□□□□ -1.42
SPTLC1-203ENST00000461132 CST3P01034 146 aaPredicted RBP6.19□□□□□ -1.42
SPTLC1-203ENST00000461132 PGRP06401 933 aa6.19□□□□□ -1.42
SPTLC1-203ENST00000461132 RPS26P62854 115 aaKnown RBP6.19□□□□□ -1.42
SPTLC1-203ENST00000461132 PTPN11Q06124 597 aaPredicted RBP6.19□□□□□ -1.42
SPTLC1-203ENST00000461132 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.19□□□□□ -1.42
SPTLC1-203ENST00000461132 TMPRSS7Q7RTY8 843 aa6.19□□□□□ -1.42
SPTLC1-203ENST00000461132 LRRC56Q8IYG6 542 aaPredicted RBP6.19□□□□□ -1.42
SPTLC1-203ENST00000461132 GAL3ST3Q96A11 431 aa6.19□□□□□ -1.42
SPTLC1-203ENST00000461132 MIR1-1HGQ9H1L0 117 aa6.19□□□□□ -1.42
SPTLC1-203ENST00000461132 EPB41L4BQ9H329 900 aa6.19□□□□□ -1.42
SPTLC1-203ENST00000461132 TRIT1Q9H3H1 467 aaKnown RBP6.19□□□□□ -1.42
SPTLC1-203ENST00000461132 DCP1AQ9NPI6 582 aaPredicted RBP6.19□□□□□ -1.42
SPTLC1-203ENST00000461132 ST14Q9Y5Y6 855 aa6.19□□□□□ -1.42
SPTLC1-203ENST00000461132 SND1Q7KZF4 910 aaKnown RBP eCLIP6.18□□□□□ -1.42
SPTLC1-203ENST00000461132 CDH24Q86UP0 819 aa6.18□□□□□ -1.42
SPTLC1-203ENST00000461132 RIN3Q8TB24 985 aa6.18□□□□□ -1.42
SPTLC1-203ENST00000461132 TACC3Q9Y6A5 838 aa6.18□□□□□ -1.42
SPTLC1-203ENST00000461132 TCAF2A6NFQ2 919 aa6.17□□□□□ -1.42
SPTLC1-203ENST00000461132 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.17□□□□□ -1.42
SPTLC1-203ENST00000461132 P4HBP07237 508 aaKnown RBP6.17□□□□□ -1.42
SPTLC1-203ENST00000461132 CFPP27918 469 aa6.17□□□□□ -1.42
SPTLC1-203ENST00000461132 GNA15P30679 374 aa6.17□□□□□ -1.42
SPTLC1-203ENST00000461132 HK2P52789 917 aa6.17□□□□□ -1.42
SPTLC1-203ENST00000461132 TNK2Q07912 1038 aa6.17□□□□□ -1.42
SPTLC1-203ENST00000461132 SEPT6Q14141 434 aa6.17□□□□□ -1.42
SPTLC1-203ENST00000461132 MAP3K11Q16584 847 aa6.17□□□□□ -1.42
SPTLC1-203ENST00000461132 SLC6A19Q695T7 634 aa6.17□□□□□ -1.42
SPTLC1-203ENST00000461132 CREG2Q8IUH2 290 aa6.17□□□□□ -1.42
SPTLC1-203ENST00000461132 PIWIL2Q8TC59 973 aaKnown RBP6.17□□□□□ -1.42
SPTLC1-203ENST00000461132 MYLIPQ8WY64 445 aa6.17□□□□□ -1.42
SPTLC1-203ENST00000461132 ZBTB7CA1YPR0 619 aa6.16□□□□□ -1.42
SPTLC1-203ENST00000461132 C1QTNF9P0C862 333 aa6.16□□□□□ -1.42
SPTLC1-203ENST00000461132 ZSCAN22P10073 491 aaPredicted RBP6.16□□□□□ -1.42
SPTLC1-203ENST00000461132 RLBP1P12271 317 aa6.16□□□□□ -1.42
SPTLC1-203ENST00000461132 DPH2Q9BQC3 489 aaPredicted RBP6.16□□□□□ -1.42
SPTLC1-203ENST00000461132 GZF1Q9H116 711 aaPredicted RBP6.16□□□□□ -1.42
SPTLC1-203ENST00000461132 GPATCH2Q9NW75 528 aa6.16□□□□□ -1.42
SPTLC1-203ENST00000461132 TMEM59LQ9UK28 342 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms