RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ZNF746Q6NUN9 644 aaPredicted RBP4.31□□□□□ -1.72
HPS3-203ENST00000460822 EAF1Q96JC9 268 aaPredicted RBP4.31□□□□□ -1.72
HPS3-203ENST00000460822 NECAB3Q96P71 396 aaPredicted RBP4.31□□□□□ -1.72
HPS3-203ENST00000460822 MRPL42Q9Y6G3 142 aaKnown RBP4.31□□□□□ -1.72
HPS3-203ENST00000460822 HCLS1P14317 486 aaPredicted RBP4.31□□□□□ -1.72
HPS3-203ENST00000460822 JAG1P78504 1218 aa4.31□□□□□ -1.72
HPS3-203ENST00000460822 FAM160A1Q05DH4 1040 aa4.31□□□□□ -1.72
HPS3-203ENST00000460822 TTLL4Q14679 1199 aa4.31□□□□□ -1.72
HPS3-203ENST00000460822 EGFLAMQ63HQ2 1017 aa4.31□□□□□ -1.72
HPS3-203ENST00000460822 FBXL19Q6PCT2 694 aa4.31□□□□□ -1.72
HPS3-203ENST00000460822 OGFOD3Q6PK18 319 aa4.31□□□□□ -1.72
HPS3-203ENST00000460822 SHISA5Q8N114 240 aa4.31□□□□□ -1.72
HPS3-203ENST00000460822 ZNF296Q8WUU4 475 aaPredicted RBP4.31□□□□□ -1.72
HPS3-203ENST00000460822 FBXL18Q96ME1 805 aa4.31□□□□□ -1.72
HPS3-203ENST00000460822 GINM1Q9NU53 330 aa4.31□□□□□ -1.72
HPS3-203ENST00000460822 BSDC1Q9NW68 430 aaPredicted RBP4.31□□□□□ -1.72
HPS3-203ENST00000460822 TLR6Q9Y2C9 796 aa4.31□□□□□ -1.72
HPS3-203ENST00000460822 SBNO2Q9Y2G9 1366 aa4.3□□□□□ -1.72
HPS3-203ENST00000460822 CELA3AP09093 270 aa4.3□□□□□ -1.72
HPS3-203ENST00000460822 LMNB1P20700 586 aa4.3□□□□□ -1.72
HPS3-203ENST00000460822 ETFBP38117 255 aa4.3□□□□□ -1.72
HPS3-203ENST00000460822 NFE2L2Q16236 605 aa4.3□□□□□ -1.72
HPS3-203ENST00000460822 NBPF6Q5VWK0 638 aa4.3□□□□□ -1.72
HPS3-203ENST00000460822 ZNF765Q7L2R6 523 aa4.3□□□□□ -1.72
HPS3-203ENST00000460822 VSIG10LQ86VR7 867 aa4.3□□□□□ -1.72
HPS3-203ENST00000460822 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.3□□□□□ -1.72
HPS3-203ENST00000460822 TP53INP2Q8IXH6 220 aa4.3□□□□□ -1.72
HPS3-203ENST00000460822 GPBAR1Q8TDU6 330 aa4.3□□□□□ -1.72
HPS3-203ENST00000460822 RHOVQ96L33 236 aa4.3□□□□□ -1.72
HPS3-203ENST00000460822 NBPF4Q96M43 638 aa4.3□□□□□ -1.72
HPS3-203ENST00000460822 DISC1Q9NRI5 854 aa4.3□□□□□ -1.72
HPS3-203ENST00000460822 UBP1Q9NZI7 540 aa4.3□□□□□ -1.72
HPS3-203ENST00000460822 FAM87AP0C7U9 286 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 RLBP1P12271 317 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 SERINC3Q13530 473 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 TCEAL1Q15170 157 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 LLGL2Q6P1M3 1020 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 CDC37L1Q7L3B6 337 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 PDZD3Q86UT5 571 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 PHC3Q8NDX5 983 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 STK35Q8TDR2 534 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 GATA6Q92908 595 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 MRFAP1L1Q96HT8 127 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 C1GALT1Q9NS00 363 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 SUPT16HQ9Y5B9 1047 aaKnown RBP4.29□□□□□ -1.72
HPS3-203ENST00000460822 DYNC1LI2O43237 492 aaPredicted RBP4.29□□□□□ -1.72
HPS3-203ENST00000460822 TRIM37O94972 964 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 SOX9P48436 509 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 LIG3P49916 1009 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 ERVK-24P63145 666 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 CDK5R2Q13319 367 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 MSMPQ1L6U9 139 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 SEZ6L2Q6UXD5 910 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 ANKS3Q6ZW76 656 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 SV2BQ7L1I2 683 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 RNF214Q8ND24 703 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 FLCNQ8NFG4 579 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 ANKRD24Q8TF21 1146 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 ELMO3Q96BJ8 720 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 NT5C1AQ9BXI3 368 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 TRIM55Q9BYV6 548 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 KCNQ5Q9NR82 932 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 CCDC39Q9UFE4 941 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 PCDHA4Q9UN74 947 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 CYP8B1Q9UNU6 501 aa4.29□□□□□ -1.72
HPS3-203ENST00000460822 PF4P02776 101 aa4.28□□□□□ -1.72
HPS3-203ENST00000460822 CRKP46108 304 aa4.28□□□□□ -1.72
HPS3-203ENST00000460822 APOBRQ0VD83 1088 aa4.28□□□□□ -1.72
HPS3-203ENST00000460822 ZC3H12AQ5D1E8 599 aaKnown RBP4.28□□□□□ -1.72
HPS3-203ENST00000460822 DIEXFQ68CQ4 756 aaKnown RBP4.28□□□□□ -1.72
HPS3-203ENST00000460822 STK11IPQ8N1F8 1099 aa4.28□□□□□ -1.72
HPS3-203ENST00000460822 GOLM1Q8NBJ4 401 aa4.28□□□□□ -1.72
HPS3-203ENST00000460822 AGBL5Q8NDL9 886 aa4.28□□□□□ -1.72
HPS3-203ENST00000460822 CPLX3Q8WVH0 158 aa4.28□□□□□ -1.72
HPS3-203ENST00000460822 ANAPC16Q96DE5 110 aa4.28□□□□□ -1.72
HPS3-203ENST00000460822 SRPK1Q96SB4 655 aaKnown RBP4.28□□□□□ -1.72
HPS3-203ENST00000460822 ZC3H7BQ9UGR2 993 aaKnown RBP4.28□□□□□ -1.72
HPS3-203ENST00000460822 STRIP2Q9ULQ0 834 aa4.28□□□□□ -1.72
HPS3-203ENST00000460822 CSADQ9Y600 493 aa4.28□□□□□ -1.72
HPS3-203ENST00000460822 DCDC2CA8MYV0 355 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 ENC1O14682 589 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 PRNPP04156 253 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 BMP6P22004 513 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 GARTP22102 1010 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 ZNF252P-AS1Q0IIN9 211 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 CAMK2GQ13555 558 aaPredicted RBP4.27□□□□□ -1.73
HPS3-203ENST00000460822 SNAP47Q5SQN1 464 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 SCARA3Q6AZY7 606 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 TTBK2Q6IQ55 1244 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 KCT2Q8NC54 265 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 GRIN3AQ8TCU5 1115 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 HNRNPLLQ8WVV9 542 aaKnown RBP4.27□□□□□ -1.73
HPS3-203ENST00000460822 PCDHGC5Q9Y5F6 944 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 CCDC85CA6NKD9 419 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 U2SURPO15042 1029 aaKnown RBP4.27□□□□□ -1.73
HPS3-203ENST00000460822 GREM1O60565 184 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 ADAMTS4O75173 837 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 COL9A2Q14055 689 aaPredicted RBP4.27□□□□□ -1.73
HPS3-203ENST00000460822 RAB33AQ14088 237 aa4.27□□□□□ -1.73
HPS3-203ENST00000460822 PPM1JQ5JR12 505 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms