RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 TJP2Q9UDY2 1190 aa7.43□□□□□ -1.22
VBP1-202ENST00000460509 ADAM30Q9UKF2 790 aa7.43□□□□□ -1.22
VBP1-202ENST00000460509 RAXQ9Y2V3 346 aa7.43□□□□□ -1.22
VBP1-202ENST00000460509 HMX2A2RU54 273 aa7.42□□□□□ -1.22
VBP1-202ENST00000460509 CHURC1-FNTBB4DL54 471 aa7.42□□□□□ -1.22
VBP1-202ENST00000460509 DYNC1LI2O43237 492 aaPredicted RBP7.42□□□□□ -1.22
VBP1-202ENST00000460509 ATE1O95260 518 aa7.42□□□□□ -1.22
VBP1-202ENST00000460509 GTF2F1P35269 517 aaKnown RBP eCLIP7.42□□□□□ -1.22
VBP1-202ENST00000460509 MCF2L2Q86YR7 1114 aa7.42□□□□□ -1.22
VBP1-202ENST00000460509 CLEC10AQ8IUN9 316 aa7.42□□□□□ -1.22
VBP1-202ENST00000460509 SREK1Q8WXA9 508 aaKnown RBP7.42□□□□□ -1.22
VBP1-202ENST00000460509 ZNRF3Q9ULT6 936 aa7.42□□□□□ -1.22
VBP1-202ENST00000460509 PRR36Q9H6K5 1346 aa7.42□□□□□ -1.22
VBP1-202ENST00000460509 IMPDH2P12268 514 aa7.41□□□□□ -1.22
VBP1-202ENST00000460509 YARSP54577 528 aaKnown RBP7.41□□□□□ -1.22
VBP1-202ENST00000460509 CDK5R2Q13319 367 aa7.41□□□□□ -1.22
VBP1-202ENST00000460509 LRRFIP1Q32MZ4 808 aaKnown RBP7.41□□□□□ -1.22
VBP1-202ENST00000460509 ARSHQ5FYA8 562 aa7.41□□□□□ -1.22
VBP1-202ENST00000460509 PRAMEF13Q5VWM6 474 aa7.41□□□□□ -1.22
VBP1-202ENST00000460509 SLC6A19Q695T7 634 aa7.41□□□□□ -1.22
VBP1-202ENST00000460509 MCATQ8IVS2 390 aaKnown RBP7.41□□□□□ -1.22
VBP1-202ENST00000460509 PHACTR4Q8IZ21 702 aa7.41□□□□□ -1.22
VBP1-202ENST00000460509 DHX38Q92620 1227 aaKnown RBP7.41□□□□□ -1.22
VBP1-202ENST00000460509 EZH1Q92800 747 aaPredicted RBP7.41□□□□□ -1.22
VBP1-202ENST00000460509 GMLQ99445 158 aa7.41□□□□□ -1.22
VBP1-202ENST00000460509 FAM83CQ9BQN1 747 aa7.41□□□□□ -1.22
VBP1-202ENST00000460509 FOXQ1Q9C009 403 aa7.41□□□□□ -1.22
VBP1-202ENST00000460509 C7orf69Q9H7B7 122 aa7.41□□□□□ -1.22
VBP1-202ENST00000460509 STRIP2Q9ULQ0 834 aa7.41□□□□□ -1.22
VBP1-202ENST00000460509 FAM86C2PA6NEL3 165 aa7.4□□□□□ -1.22
VBP1-202ENST00000460509 SLC22A31A6NKX4 558 aa7.4□□□□□ -1.22
VBP1-202ENST00000460509 DNAJA2O60884 412 aa7.4□□□□□ -1.22
VBP1-202ENST00000460509 FGRP09769 529 aa7.4□□□□□ -1.22
VBP1-202ENST00000460509 RAG1P15918 1043 aa7.4□□□□□ -1.22
VBP1-202ENST00000460509 SLBPQ14493 270 aaKnown RBP eCLIP7.4□□□□□ -1.22
VBP1-202ENST00000460509 PPP2R5EQ16537 467 aa7.4□□□□□ -1.22
VBP1-202ENST00000460509 TMEM201Q5SNT2 666 aa7.4□□□□□ -1.22
VBP1-202ENST00000460509 OVOS1Q6IE37 1185 aa7.4□□□□□ -1.22
VBP1-202ENST00000460509 PRR23CQ6ZRP0 262 aa7.4□□□□□ -1.22
VBP1-202ENST00000460509 ARMCX6Q7L4S7 300 aa7.4□□□□□ -1.22
VBP1-202ENST00000460509 FBXL6Q8N531 539 aa7.4□□□□□ -1.22
VBP1-202ENST00000460509 DRC1Q96MC2 740 aa7.4□□□□□ -1.22
VBP1-202ENST00000460509 TBC1D32Q96NH3 1257 aa7.4□□□□□ -1.22
VBP1-202ENST00000460509 GMIPQ9P107 970 aa7.4□□□□□ -1.22
VBP1-202ENST00000460509 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.39□□□□□ -1.23
VBP1-202ENST00000460509 STK10O94804 968 aaKnown RBP7.39□□□□□ -1.23
VBP1-202ENST00000460509 CHMP4BP1P59074 171 aa7.39□□□□□ -1.23
VBP1-202ENST00000460509 RUFY4Q6ZNE9 571 aa7.39□□□□□ -1.23
VBP1-202ENST00000460509 MRPL41Q8IXM3 137 aaKnown RBP7.39□□□□□ -1.23
VBP1-202ENST00000460509 TMEM40Q8WWA1 233 aa7.39□□□□□ -1.23
VBP1-202ENST00000460509 MFSD14AQ96MC6 490 aa7.39□□□□□ -1.23
VBP1-202ENST00000460509 MIPEPQ99797 713 aa7.39□□□□□ -1.23
VBP1-202ENST00000460509 LRIG2O94898 1065 aa7.38□□□□□ -1.23
VBP1-202ENST00000460509 CST3P01034 146 aaPredicted RBP7.38□□□□□ -1.23
VBP1-202ENST00000460509 GBP1P32455 592 aa7.38□□□□□ -1.23
VBP1-202ENST00000460509 ETFBP38117 255 aa7.38□□□□□ -1.23
VBP1-202ENST00000460509 LSRQ86X29 649 aaPredicted RBP7.38□□□□□ -1.23
VBP1-202ENST00000460509 TOP6BLQ8N6T0 577 aa7.38□□□□□ -1.23
VBP1-202ENST00000460509 GIMAP7Q8NHV1 300 aa7.38□□□□□ -1.23
VBP1-202ENST00000460509 ATG4CQ96DT6 458 aa7.38□□□□□ -1.23
VBP1-202ENST00000460509 SHDQ96IW2 340 aa7.38□□□□□ -1.23
VBP1-202ENST00000460509 ZNF408Q9H9D4 720 aa7.38□□□□□ -1.23
VBP1-202ENST00000460509 R3HCC1Q9Y3T6 440 aaKnown RBP7.38□□□□□ -1.23
VBP1-202ENST00000460509 GIPRP48546 466 aa7.37□□□□□ -1.23
VBP1-202ENST00000460509 NLRC3Q7RTR2 1065 aa7.37□□□□□ -1.23
VBP1-202ENST00000460509 MFSD2AQ8NA29 543 aa7.37□□□□□ -1.23
VBP1-202ENST00000460509 KIF2CQ99661 725 aa7.37□□□□□ -1.23
VBP1-202ENST00000460509 C1GALT1Q9NS00 363 aa7.37□□□□□ -1.23
VBP1-202ENST00000460509 SMAD7O15105 426 aaKnown RBP7.36□□□□□ -1.23
VBP1-202ENST00000460509 FAM87AP0C7U9 286 aa7.36□□□□□ -1.23
VBP1-202ENST00000460509 NME1P15531 152 aaKnown RBP7.36□□□□□ -1.23
VBP1-202ENST00000460509 POLR2BP30876 1174 aaKnown RBP7.36□□□□□ -1.23
VBP1-202ENST00000460509 SEZ6L2Q6UXD5 910 aa7.36□□□□□ -1.23
VBP1-202ENST00000460509 CDH24Q86UP0 819 aa7.36□□□□□ -1.23
VBP1-202ENST00000460509 OR6P1Q8NGX9 317 aa7.36□□□□□ -1.23
VBP1-202ENST00000460509 BAHD1Q8TBE0 780 aaPredicted RBP7.36□□□□□ -1.23
VBP1-202ENST00000460509 CCDC74BQ96LY2 380 aa7.36□□□□□ -1.23
VBP1-202ENST00000460509 KRTAP9-2Q9BYQ4 174 aa7.36□□□□□ -1.23
VBP1-202ENST00000460509 PRDM10Q9NQV6 1147 aa7.36□□□□□ -1.23
VBP1-202ENST00000460509 TPX2Q9ULW0 747 aaKnown RBP7.36□□□□□ -1.23
VBP1-202ENST00000460509 LEFTY1O75610 366 aa7.35□□□□□ -1.23
VBP1-202ENST00000460509 ITGB7P26010 798 aa7.35□□□□□ -1.23
VBP1-202ENST00000460509 ADMP35318 185 aa7.35□□□□□ -1.23
VBP1-202ENST00000460509 CAP2P40123 477 aa7.35□□□□□ -1.23
VBP1-202ENST00000460509 LETMD1Q6P1Q0 360 aa7.35□□□□□ -1.23
VBP1-202ENST00000460509 SLFN12Q8IYM2 578 aa7.35□□□□□ -1.23
VBP1-202ENST00000460509 FAM169BQ8N8A8 192 aa7.35□□□□□ -1.23
VBP1-202ENST00000460509 RBBP8NLQ8NC74 664 aaPredicted RBP7.35□□□□□ -1.23
VBP1-202ENST00000460509 RIN3Q8TB24 985 aa7.35□□□□□ -1.23
VBP1-202ENST00000460509 CYB5D2Q8WUJ1 264 aa7.35□□□□□ -1.23
VBP1-202ENST00000460509 DNAJC2Q99543 621 aaKnown RBP7.35□□□□□ -1.23
VBP1-202ENST00000460509 TM9SF2Q99805 663 aa7.35□□□□□ -1.23
VBP1-202ENST00000460509 CNNM2Q9H8M5 875 aa7.35□□□□□ -1.23
VBP1-202ENST00000460509 MEIS3P2A8K0S8 358 aa7.34□□□□□ -1.23
VBP1-202ENST00000460509 WDR64B1ANS9 1081 aa7.34□□□□□ -1.23
VBP1-202ENST00000460509 SLITRK5O94991 958 aa7.34□□□□□ -1.23
VBP1-202ENST00000460509 NFIAQ12857 509 aa7.34□□□□□ -1.23
VBP1-202ENST00000460509 CDCP2Q5VXM1 449 aa7.34□□□□□ -1.23
VBP1-202ENST00000460509 RNF43Q68DV7 783 aa7.34□□□□□ -1.23
VBP1-202ENST00000460509 ANKS3Q6ZW76 656 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms