RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 RYDENQ9NUL5 291 aaKnown RBP12.17□□□□□ -0.46
GARNL3-211ENST00000460176 SWAP70Q9UH65 585 aa12.17□□□□□ -0.46
GARNL3-211ENST00000460176 ZNF112Q9UJU3 913 aa12.17□□□□□ -0.46
GARNL3-211ENST00000460176 RIOK3O14730 519 aaKnown RBP12.16□□□□□ -0.46
GARNL3-211ENST00000460176 PPP1R12BO60237 982 aaPredicted RBP12.16□□□□□ -0.46
GARNL3-211ENST00000460176 SLC3A2P08195 630 aaKnown RBP12.16□□□□□ -0.46
GARNL3-211ENST00000460176 FGRP09769 529 aa12.16□□□□□ -0.46
GARNL3-211ENST00000460176 RASA1P20936 1047 aa12.16□□□□□ -0.46
GARNL3-211ENST00000460176 HSPA4P34932 840 aa12.16□□□□□ -0.46
GARNL3-211ENST00000460176 FKBP1BP68106 108 aa12.16□□□□□ -0.46
GARNL3-211ENST00000460176 AKNAD1Q5T1N1 836 aa12.16□□□□□ -0.46
GARNL3-211ENST00000460176 STAG1Q8WVM7 1258 aa12.16□□□□□ -0.46
GARNL3-211ENST00000460176 KCNB2Q92953 911 aa12.16□□□□□ -0.46
GARNL3-211ENST00000460176 KLRG1Q96E93 195 aa12.16□□□□□ -0.46
GARNL3-211ENST00000460176 WRNIP1Q96S55 665 aa12.16□□□□□ -0.46
GARNL3-211ENST00000460176 TRIM34Q9BYJ4 488 aa12.16□□□□□ -0.46
GARNL3-211ENST00000460176 BACH2Q9BYV9 841 aa12.16□□□□□ -0.46
GARNL3-211ENST00000460176 GBA2Q9HCG7 927 aaPredicted RBP12.16□□□□□ -0.46
GARNL3-211ENST00000460176 ANGEL1Q9UNK9 670 aaKnown RBP12.16□□□□□ -0.46
GARNL3-211ENST00000460176 NEDD4P46934 1319 aa12.15□□□□□ -0.46
GARNL3-211ENST00000460176 ORC4O43929 436 aa12.15□□□□□ -0.46
GARNL3-211ENST00000460176 PRDM1O75626 825 aa12.15□□□□□ -0.46
GARNL3-211ENST00000460176 INPP5BP32019 993 aa12.15□□□□□ -0.46
GARNL3-211ENST00000460176 IREB2P48200 963 aaKnown RBP12.15□□□□□ -0.46
GARNL3-211ENST00000460176 JAG1P78504 1218 aa12.15□□□□□ -0.46
GARNL3-211ENST00000460176 SHROOM1Q2M3G4 852 aaPredicted RBP12.15□□□□□ -0.46
GARNL3-211ENST00000460176 STOX1Q6ZVD7 989 aa12.15□□□□□ -0.46
GARNL3-211ENST00000460176 ARMC9Q7Z3E5 817 aa12.15□□□□□ -0.46
GARNL3-211ENST00000460176 NKX2-3Q8TAU0 364 aa12.15□□□□□ -0.46
GARNL3-211ENST00000460176 E7EWF7 191 aa12.14□□□□□ -0.47
GARNL3-211ENST00000460176 UBE2Q2LH0YL09 131 aa12.14□□□□□ -0.47
GARNL3-211ENST00000460176 PCP11498 1178 aaKnown RBP12.14□□□□□ -0.47
GARNL3-211ENST00000460176 CAP2P40123 477 aa12.14□□□□□ -0.47
GARNL3-211ENST00000460176 NUBP1P53384 320 aa12.14□□□□□ -0.47
GARNL3-211ENST00000460176 PDE4BQ07343 736 aa12.14□□□□□ -0.47
GARNL3-211ENST00000460176 VGLL4Q14135 290 aa12.14□□□□□ -0.47
GARNL3-211ENST00000460176 TTLL12Q14166 644 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-211ENST00000460176 TSGA10IPQ3SY00 556 aa12.14□□□□□ -0.47
GARNL3-211ENST00000460176 NOL9Q5SY16 702 aaKnown RBP12.14□□□□□ -0.47
GARNL3-211ENST00000460176 LDLRAD1Q5T700 205 aa12.14□□□□□ -0.47
GARNL3-211ENST00000460176 RNF20Q5VTR2 975 aa12.14□□□□□ -0.47
GARNL3-211ENST00000460176 MFSD6Q6ZSS7 791 aa12.14□□□□□ -0.47
GARNL3-211ENST00000460176 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-211ENST00000460176 RASEFQ8IZ41 740 aa12.14□□□□□ -0.47
GARNL3-211ENST00000460176 C2orf69Q8N8R5 385 aa12.14□□□□□ -0.47
GARNL3-211ENST00000460176 RNF41Q9H4P4 317 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-211ENST00000460176 MKNK2Q9HBH9 465 aa12.14□□□□□ -0.47
GARNL3-211ENST00000460176 ZNF287Q9HBT7 754 aa12.14□□□□□ -0.47
GARNL3-211ENST00000460176 SNX14Q9Y5W7 946 aa12.14□□□□□ -0.47
GARNL3-211ENST00000460176 SNCAIPQ9Y6H5 919 aa12.14□□□□□ -0.47
GARNL3-211ENST00000460176 TMEM88BA6NKF7 163 aa12.13□□□□□ -0.47
GARNL3-211ENST00000460176 CTNND1O60716 968 aaKnown RBP12.13□□□□□ -0.47
GARNL3-211ENST00000460176 GDF11O95390 407 aa12.13□□□□□ -0.47
GARNL3-211ENST00000460176 AKR1B1P15121 316 aa12.13□□□□□ -0.47
GARNL3-211ENST00000460176 MAP3K9P80192 1104 aa12.13□□□□□ -0.47
GARNL3-211ENST00000460176 CERKLQ49MI3 558 aaPredicted RBP12.13□□□□□ -0.47
GARNL3-211ENST00000460176 ANKRD13AQ8IZ07 590 aa12.13□□□□□ -0.47
GARNL3-211ENST00000460176 SCYL3Q8IZE3 742 aa12.13□□□□□ -0.47
GARNL3-211ENST00000460176 ZKSCAN4Q969J2 545 aaPredicted RBP12.13□□□□□ -0.47
GARNL3-211ENST00000460176 CLMNQ96JQ2 1002 aa12.13□□□□□ -0.47
GARNL3-211ENST00000460176 CCDC17Q96LX7 622 aa12.13□□□□□ -0.47
GARNL3-211ENST00000460176 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.13□□□□□ -0.47
GARNL3-211ENST00000460176 ZBTB21Q9ULJ3 1066 aa12.13□□□□□ -0.47
GARNL3-211ENST00000460176 PLIN4Q96Q06 1357 aa12.13□□□□□ -0.47
GARNL3-211ENST00000460176 PTPRFP10586 1907 aa12.12□□□□□ -0.47
GARNL3-211ENST00000460176 MYH4Q9Y623 1939 aa12.12□□□□□ -0.47
GARNL3-211ENST00000460176 UNCXA6NJT0 531 aa12.12□□□□□ -0.47
GARNL3-211ENST00000460176 B4E1Z4 1266 aa12.12□□□□□ -0.47
GARNL3-211ENST00000460176 GH2P01242 217 aa12.12□□□□□ -0.47
GARNL3-211ENST00000460176 GUCY1A2P33402 732 aa12.12□□□□□ -0.47
GARNL3-211ENST00000460176 APLP1P51693 650 aa12.12□□□□□ -0.47
GARNL3-211ENST00000460176 COL9A3Q14050 684 aaPredicted RBP12.12□□□□□ -0.47
GARNL3-211ENST00000460176 ABCB5Q2M3G0 1257 aa12.12□□□□□ -0.47
GARNL3-211ENST00000460176 FAM47AQ5JRC9 791 aa12.12□□□□□ -0.47
GARNL3-211ENST00000460176 RRP12Q5JTH9 1297 aaKnown RBP12.12□□□□□ -0.47
GARNL3-211ENST00000460176 SAPCD2Q86UD0 394 aa12.12□□□□□ -0.47
GARNL3-211ENST00000460176 ZNF444Q8N0Y2 327 aaPredicted RBP12.12□□□□□ -0.47
GARNL3-211ENST00000460176 CNNM2Q9H8M5 875 aa12.12□□□□□ -0.47
GARNL3-211ENST00000460176 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.12□□□□□ -0.47
GARNL3-211ENST00000460176 TLL2Q9Y6L7 1015 aa12.12□□□□□ -0.47
GARNL3-211ENST00000460176 PITPNM1O00562 1244 aa12.11□□□□□ -0.47
GARNL3-211ENST00000460176 RANBP6O60518 1105 aaKnown RBP12.11□□□□□ -0.47
GARNL3-211ENST00000460176 ZKSCAN1P17029 563 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-211ENST00000460176 MCCP23508 829 aa12.11□□□□□ -0.47
GARNL3-211ENST00000460176 NT5C2P49902 561 aa12.11□□□□□ -0.47
GARNL3-211ENST00000460176 HUNKP57058 714 aa12.11□□□□□ -0.47
GARNL3-211ENST00000460176 TFAP4Q01664 338 aa12.11□□□□□ -0.47
GARNL3-211ENST00000460176 ADCK5Q3MIX3 580 aa12.11□□□□□ -0.47
GARNL3-211ENST00000460176 NEDD1Q8NHV4 660 aa12.11□□□□□ -0.47
GARNL3-211ENST00000460176 ESR2Q92731 530 aa12.11□□□□□ -0.47
GARNL3-211ENST00000460176 IL17RAQ96F46 866 aa12.11□□□□□ -0.47
GARNL3-211ENST00000460176 KRT23Q9C075 422 aa12.11□□□□□ -0.47
GARNL3-211ENST00000460176 TOMM22Q9NS69 142 aa12.11□□□□□ -0.47
GARNL3-211ENST00000460176 GINM1Q9NU53 330 aa12.11□□□□□ -0.47
GARNL3-211ENST00000460176 CSADQ9Y600 493 aa12.11□□□□□ -0.47
GARNL3-211ENST00000460176 IGKV6D-41A0A0C4DH26 115 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 TSPY2A6NKD2 308 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 MPHOSPH10O00566 681 aaKnown RBP12.1□□□□□ -0.47
GARNL3-211ENST00000460176 KDM4AO75164 1064 aa12.1□□□□□ -0.47
GARNL3-211ENST00000460176 ASNSP08243 561 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms