RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 WDR18Q9BV38 432 aa25.32■■□□□ 1.64
SRM-202ENST00000459997 MTMR2Q13614 643 aa25.31■■□□□ 1.64
SRM-202ENST00000459997 SH3D19Q5HYK7 790 aa25.31■■□□□ 1.64
SRM-202ENST00000459997 CRNKL1Q9BZJ0 848 aaKnown RBP25.31■■□□□ 1.64
SRM-202ENST00000459997 GINM1Q9NU53 330 aa25.31■■□□□ 1.64
SRM-202ENST00000459997 SERPINB13Q9UIV8 391 aa25.31■■□□□ 1.64
SRM-202ENST00000459997 ZBTB21Q9ULJ3 1066 aa25.31■■□□□ 1.64
SRM-202ENST00000459997 MYPNQ86TC9 1320 aa25.31■■□□□ 1.64
SRM-202ENST00000459997 TCRBV5S4A2TA0A5A2 114 aa25.3■■□□□ 1.64
SRM-202ENST00000459997 MYCP01106 439 aaPredicted RBP25.3■■□□□ 1.64
SRM-202ENST00000459997 PABPC4Q13310 644 aaKnown RBP eCLIP25.3■■□□□ 1.64
SRM-202ENST00000459997 TTC6Q86TZ1 520 aa25.3■■□□□ 1.64
SRM-202ENST00000459997 HAUS7Q99871 368 aa25.3■■□□□ 1.64
SRM-202ENST00000459997 TMEM106CQ9BVX2 250 aa25.3■■□□□ 1.64
SRM-202ENST00000459997 EHD4Q9H223 541 aa25.3■■□□□ 1.64
SRM-202ENST00000459997 BACE1P56817 501 aa25.29■■□□□ 1.64
SRM-202ENST00000459997 ANKRD13CQ8N6S4 541 aa25.29■■□□□ 1.64
SRM-202ENST00000459997 RAET1EQ8TD07 263 aa25.29■■□□□ 1.64
SRM-202ENST00000459997 TMOD4Q9NZQ9 345 aa25.29■■□□□ 1.64
SRM-202ENST00000459997 TATDN1Q6P1N9 297 aa25.28■■□□□ 1.64
SRM-202ENST00000459997 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.28■■□□□ 1.64
SRM-202ENST00000459997 GH2P01242 217 aa25.27■■□□□ 1.64
SRM-202ENST00000459997 POLR3DP05423 398 aaPredicted RBP25.27■■□□□ 1.64
SRM-202ENST00000459997 PRKCZQ05513 592 aa25.27■■□□□ 1.64
SRM-202ENST00000459997 LCORLQ8N3X6 602 aa25.27■■□□□ 1.64
SRM-202ENST00000459997 ASCC2Q9H1I8 757 aaPredicted RBP25.27■■□□□ 1.64
SRM-202ENST00000459997 C19orf81C9J6K1 198 aa25.26■■□□□ 1.63
SRM-202ENST00000459997 USP17L10C9JJH3 530 aa25.26■■□□□ 1.63
SRM-202ENST00000459997 EN2P19622 333 aaPredicted RBP25.26■■□□□ 1.63
SRM-202ENST00000459997 ADD2P35612 726 aa25.26■■□□□ 1.63
SRM-202ENST00000459997 PLCD1P51178 756 aa25.26■■□□□ 1.63
SRM-202ENST00000459997 DCTPP1Q9H773 170 aa25.26■■□□□ 1.63
SRM-202ENST00000459997 MCM9Q9NXL9 1143 aa25.26■■□□□ 1.63
SRM-202ENST00000459997 TNPO2O14787 897 aaKnown RBP25.25■■□□□ 1.63
SRM-202ENST00000459997 GRK4P32298 578 aa25.25■■□□□ 1.63
SRM-202ENST00000459997 GCLCP48506 637 aaPredicted RBP25.25■■□□□ 1.63
SRM-202ENST00000459997 FAM110CQ1W6H9 321 aa25.25■■□□□ 1.63
SRM-202ENST00000459997 SLFNL1Q499Z3 407 aa25.25■■□□□ 1.63
SRM-202ENST00000459997 CERKLQ49MI3 558 aaPredicted RBP25.25■■□□□ 1.63
SRM-202ENST00000459997 SDR42E1Q8WUS8 393 aa25.25■■□□□ 1.63
SRM-202ENST00000459997 ARMT1Q9H993 441 aa25.25■■□□□ 1.63
SRM-202ENST00000459997 GABRQQ9UN88 632 aa25.25■■□□□ 1.63
SRM-202ENST00000459997 MYH7P12883 1935 aa25.25■■□□□ 1.63
SRM-202ENST00000459997 RRP1P56182 461 aaKnown RBP25.24■■□□□ 1.63
SRM-202ENST00000459997 IRX3P78415 501 aaPredicted RBP25.24■■□□□ 1.63
SRM-202ENST00000459997 ECHDC1Q9NTX5 307 aa25.24■■□□□ 1.63
SRM-202ENST00000459997 PDE4DIPQ5VU43 2346 aa25.23■■□□□ 1.63
SRM-202ENST00000459997 MBD4O95243 580 aa25.23■■□□□ 1.63
SRM-202ENST00000459997 SHMT1P34896 483 aa25.23■■□□□ 1.63
SRM-202ENST00000459997 ABCB5Q2M3G0 1257 aa25.23■■□□□ 1.63
SRM-202ENST00000459997 DCP1AQ9NPI6 582 aaPredicted RBP25.23■■□□□ 1.63
SRM-202ENST00000459997 BRCA2P51587 3418 aa25.22■■□□□ 1.63
SRM-202ENST00000459997 RAB3GAP1Q15042 981 aa25.22■■□□□ 1.63
SRM-202ENST00000459997 GPATCH3Q96I76 525 aa25.22■■□□□ 1.63
SRM-202ENST00000459997 PCDHB15Q9Y5E8 787 aa25.22■■□□□ 1.63
SRM-202ENST00000459997 KIAA0100Q14667 2235 aaKnown RBP25.21■■□□□ 1.63
SRM-202ENST00000459997 CHGBP05060 677 aa25.21■■□□□ 1.63
SRM-202ENST00000459997 HOXA7P31268 230 aaPredicted RBP25.21■■□□□ 1.63
SRM-202ENST00000459997 FLT3LGP49771 235 aa25.21■■□□□ 1.63
SRM-202ENST00000459997 EVX2Q03828 476 aa25.21■■□□□ 1.63
SRM-202ENST00000459997 UBE3CQ15386 1083 aa25.21■■□□□ 1.63
SRM-202ENST00000459997 USP17L2Q6R6M4 530 aa25.21■■□□□ 1.63
SRM-202ENST00000459997 FEZ1Q99689 392 aa25.21■■□□□ 1.63
SRM-202ENST00000459997 CABP5Q9NP86 173 aa25.21■■□□□ 1.63
SRM-202ENST00000459997 BIN2Q9UBW5 565 aaPredicted RBP25.21■■□□□ 1.63
SRM-202ENST00000459997 PRKAB2O43741 272 aa25.2■■□□□ 1.62
SRM-202ENST00000459997 GABPAQ06546 454 aa25.2■■□□□ 1.62
SRM-202ENST00000459997 MTFR1Q15390 333 aa25.2■■□□□ 1.62
SRM-202ENST00000459997 ZYXQ15942 572 aaKnown RBP25.2■■□□□ 1.62
SRM-202ENST00000459997 ZSCAN25Q6NSZ9 544 aa25.2■■□□□ 1.62
SRM-202ENST00000459997 SLAIN1Q8ND83 568 aa25.2■■□□□ 1.62
SRM-202ENST00000459997 COA7Q96BR5 231 aa25.2■■□□□ 1.62
SRM-202ENST00000459997 EMILIN3Q9NT22 766 aa25.2■■□□□ 1.62
SRM-202ENST00000459997 ADCY3O60266 1144 aa25.19■■□□□ 1.62
SRM-202ENST00000459997 CYP2D6P10635 497 aa25.19■■□□□ 1.62
SRM-202ENST00000459997 TSHZ3Q63HK5 1081 aa25.19■■□□□ 1.62
SRM-202ENST00000459997 P2RX7Q99572 595 aaKnown RBP25.19■■□□□ 1.62
SRM-202ENST00000459997 ATP8A2Q9NTI2 1148 aa25.19■■□□□ 1.62
SRM-202ENST00000459997 HERVK_113P62684 666 aa25.18■■□□□ 1.62
SRM-202ENST00000459997 PRPF38BQ5VTL8 546 aaKnown RBP25.18■■□□□ 1.62
SRM-202ENST00000459997 MORF4L1Q9UBU8 362 aa25.18■■□□□ 1.62
SRM-202ENST00000459997 UBXN2AP68543 259 aa25.17■■□□□ 1.62
SRM-202ENST00000459997 IRF5Q13568 498 aa25.17■■□□□ 1.62
SRM-202ENST00000459997 TAOK2Q9UL54 1235 aa25.17■■□□□ 1.62
SRM-202ENST00000459997 BAZ2AQ9UIF9 1905 aaKnown RBP25.17■■□□□ 1.62
SRM-202ENST00000459997 MPHOSPH10O00566 681 aaKnown RBP25.16■■□□□ 1.62
SRM-202ENST00000459997 CCL5P13501 91 aa25.16■■□□□ 1.62
SRM-202ENST00000459997 ELNP15502 786 aa25.16■■□□□ 1.62
SRM-202ENST00000459997 GUCY1A2P33402 732 aa25.16■■□□□ 1.62
SRM-202ENST00000459997 USP14P54578 494 aa25.16■■□□□ 1.62
SRM-202ENST00000459997 SLC44A5Q8NCS7 719 aa25.16■■□□□ 1.62
SRM-202ENST00000459997 ACER1Q8TDN7 264 aa25.16■■□□□ 1.62
SRM-202ENST00000459997 C12orf42Q96LP6 360 aa25.16■■□□□ 1.62
SRM-202ENST00000459997 KIAA1683Q9H0B3 1180 aa25.16■■□□□ 1.62
SRM-202ENST00000459997 PUS7LQ9H0K6 701 aaKnown RBP25.16■■□□□ 1.62
SRM-202ENST00000459997 SLC4A4Q9Y6R1 1079 aa25.16■■□□□ 1.62
SRM-202ENST00000459997 MKI67P46013 3256 aaKnown RBP25.15■■□□□ 1.62
SRM-202ENST00000459997 SEPT2Q15019 361 aa25.15■■□□□ 1.62
SRM-202ENST00000459997 AMOTL1Q8IY63 956 aa25.15■■□□□ 1.62
SRM-202ENST00000459997 KBTBD3Q8NAB2 608 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms