RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 HMGCS2P54868 508 aa19.44■□□□□ 0.7
COL7A1-203ENST00000459756 HDAC1Q13547 482 aaPredicted RBP19.44■□□□□ 0.7
COL7A1-203ENST00000459756 SLFNL1Q499Z3 407 aa19.44■□□□□ 0.7
COL7A1-203ENST00000459756 SH3D19Q5HYK7 790 aa19.44■□□□□ 0.7
COL7A1-203ENST00000459756 TSHZ3Q63HK5 1081 aa19.44■□□□□ 0.7
COL7A1-203ENST00000459756 KBTBD3Q8NAB2 608 aa19.44■□□□□ 0.7
COL7A1-203ENST00000459756 SDR42E1Q8WUS8 393 aa19.44■□□□□ 0.7
COL7A1-203ENST00000459756 ARHGAP39Q9C0H5 1083 aa19.44■□□□□ 0.7
COL7A1-203ENST00000459756 ATP8A2Q9NTI2 1148 aa19.44■□□□□ 0.7
COL7A1-203ENST00000459756 ZBTB47Q9UFB7 747 aaPredicted RBP19.44■□□□□ 0.7
COL7A1-203ENST00000459756 PNMA3Q9UL41 463 aa19.44■□□□□ 0.7
COL7A1-203ENST00000459756 CENPFP49454 3210 aa19.44■□□□□ 0.7
COL7A1-203ENST00000459756 ERC2O15083 957 aa19.43■□□□□ 0.7
COL7A1-203ENST00000459756 BACE1P56817 501 aa19.43■□□□□ 0.7
COL7A1-203ENST00000459756 PABPC4Q13310 644 aaKnown RBP eCLIP19.43■□□□□ 0.7
COL7A1-203ENST00000459756 TREML2Q5T2D2 321 aa19.43■□□□□ 0.7
COL7A1-203ENST00000459756 SMCR8Q8TEV9 937 aaPredicted RBP19.43■□□□□ 0.7
COL7A1-203ENST00000459756 GCC1Q96CN9 775 aa19.43■□□□□ 0.7
COL7A1-203ENST00000459756 TAOK2Q9UL54 1235 aa19.43■□□□□ 0.7
COL7A1-203ENST00000459756 C19orf81C9J6K1 198 aa19.42■□□□□ 0.7
COL7A1-203ENST00000459756 GH2P01242 217 aa19.42■□□□□ 0.7
COL7A1-203ENST00000459756 PRMT2P55345 433 aa19.42■□□□□ 0.7
COL7A1-203ENST00000459756 SOX10P56693 466 aa19.42■□□□□ 0.7
COL7A1-203ENST00000459756 MTMR2Q13614 643 aa19.42■□□□□ 0.7
COL7A1-203ENST00000459756 SHROOM1Q2M3G4 852 aaPredicted RBP19.42■□□□□ 0.7
COL7A1-203ENST00000459756 CERKLQ49MI3 558 aaPredicted RBP19.42■□□□□ 0.7
COL7A1-203ENST00000459756 TMOD4Q9NZQ9 345 aa19.42■□□□□ 0.7
COL7A1-203ENST00000459756 USP17L10C9JJH3 530 aa19.41■□□□□ 0.7
COL7A1-203ENST00000459756 PRKAB2O43741 272 aa19.41■□□□□ 0.7
COL7A1-203ENST00000459756 GLRX3O76003 335 aaKnown RBP19.41■□□□□ 0.7
COL7A1-203ENST00000459756 CHGBP05060 677 aa19.41■□□□□ 0.7
COL7A1-203ENST00000459756 ZFYP08048 801 aaPredicted RBP19.41■□□□□ 0.7
COL7A1-203ENST00000459756 SHMT1P34896 483 aa19.41■□□□□ 0.7
COL7A1-203ENST00000459756 PSMC4P43686 418 aa19.41■□□□□ 0.7
COL7A1-203ENST00000459756 MLLT1Q03111 559 aaPredicted RBP19.41■□□□□ 0.7
COL7A1-203ENST00000459756 GABPAQ06546 454 aa19.41■□□□□ 0.7
COL7A1-203ENST00000459756 ABCB5Q2M3G0 1257 aa19.41■□□□□ 0.7
COL7A1-203ENST00000459756 ARMC5Q96C12 935 aa19.41■□□□□ 0.7
COL7A1-203ENST00000459756 DDRGK1Q96HY6 314 aa19.41■□□□□ 0.7
COL7A1-203ENST00000459756 ZSWIM8A7E2V4 1837 aa19.41■□□□□ 0.7
COL7A1-203ENST00000459756 MX1P20591 662 aa19.4■□□□□ 0.7
COL7A1-203ENST00000459756 OSBPP22059 807 aa19.4■□□□□ 0.7
COL7A1-203ENST00000459756 HOXD10P28358 340 aa19.4■□□□□ 0.7
COL7A1-203ENST00000459756 LRRFIP1Q32MZ4 808 aaKnown RBP19.4■□□□□ 0.7
COL7A1-203ENST00000459756 ANKRD45Q5TZF3 282 aa19.4■□□□□ 0.7
COL7A1-203ENST00000459756 AMOTL1Q8IY63 956 aa19.4■□□□□ 0.7
COL7A1-203ENST00000459756 PI4K2BQ8TCG2 481 aa19.4■□□□□ 0.7
COL7A1-203ENST00000459756 OTUD7AQ8TE49 926 aaPredicted RBP19.4■□□□□ 0.7
COL7A1-203ENST00000459756 TRIM47Q96LD4 638 aa19.4■□□□□ 0.7
COL7A1-203ENST00000459756 PUS7LQ9H0K6 701 aaKnown RBP19.4■□□□□ 0.7
COL7A1-203ENST00000459756 CABP5Q9NP86 173 aa19.4■□□□□ 0.7
COL7A1-203ENST00000459756 PTCH2Q9Y6C5 1203 aa19.4■□□□□ 0.7
COL7A1-203ENST00000459756 SLC4A4Q9Y6R1 1079 aa19.4■□□□□ 0.7
COL7A1-203ENST00000459756 RNF113AO15541 343 aaKnown RBP19.39■□□□□ 0.69
COL7A1-203ENST00000459756 FMNL1O95466 1100 aaPredicted RBP19.39■□□□□ 0.69
COL7A1-203ENST00000459756 FCGRTP55899 365 aa19.39■□□□□ 0.69
COL7A1-203ENST00000459756 SWAP70Q9UH65 585 aa19.39■□□□□ 0.69
COL7A1-203ENST00000459756 CYP2D6P10635 497 aa19.38■□□□□ 0.69
COL7A1-203ENST00000459756 CTGFP29279 349 aa19.38■□□□□ 0.69
COL7A1-203ENST00000459756 GCLCP48506 637 aaPredicted RBP19.38■□□□□ 0.69
COL7A1-203ENST00000459756 RAB3GAP1Q15042 981 aa19.38■□□□□ 0.69
COL7A1-203ENST00000459756 SLC9C1Q4G0N8 1177 aa19.38■□□□□ 0.69
COL7A1-203ENST00000459756 NBPF11Q86T75 865 aa19.38■□□□□ 0.69
COL7A1-203ENST00000459756 APPBP2Q92624 585 aa19.38■□□□□ 0.69
COL7A1-203ENST00000459756 STRBPQ96SI9 672 aaKnown RBP19.38■□□□□ 0.69
COL7A1-203ENST00000459756 ASCC2Q9H1I8 757 aaPredicted RBP19.38■□□□□ 0.69
COL7A1-203ENST00000459756 SRRDQ9UH36 339 aa19.38■□□□□ 0.69
COL7A1-203ENST00000459756 BAZ2AQ9UIF9 1905 aaKnown RBP19.38■□□□□ 0.69
COL7A1-203ENST00000459756 MGAMO43451 1857 aa19.37■□□□□ 0.69
COL7A1-203ENST00000459756 SALL3Q9BXA9 1300 aa19.37■□□□□ 0.69
COL7A1-203ENST00000459756 HOXA7P31268 230 aaPredicted RBP19.37■□□□□ 0.69
COL7A1-203ENST00000459756 EVX2Q03828 476 aa19.37■□□□□ 0.69
COL7A1-203ENST00000459756 FAM110CQ1W6H9 321 aa19.37■□□□□ 0.69
COL7A1-203ENST00000459756 C12orf60Q5U649 245 aa19.37■□□□□ 0.69
COL7A1-203ENST00000459756 USP17L2Q6R6M4 530 aa19.37■□□□□ 0.69
COL7A1-203ENST00000459756 ANKRD13CQ8N6S4 541 aa19.37■□□□□ 0.69
COL7A1-203ENST00000459756 FEZ1Q99689 392 aa19.37■□□□□ 0.69
COL7A1-203ENST00000459756 RWDD1Q9H446 243 aaPredicted RBP19.37■□□□□ 0.69
COL7A1-203ENST00000459756 USP17L12C9JPN9 530 aa19.36■□□□□ 0.69
COL7A1-203ENST00000459756 USP17L21D6R901 530 aa19.36■□□□□ 0.69
COL7A1-203ENST00000459756 ECM2O94769 699 aaPredicted RBP19.36■□□□□ 0.69
COL7A1-203ENST00000459756 IRX3P78415 501 aaPredicted RBP19.36■□□□□ 0.69
COL7A1-203ENST00000459756 OSBP2Q969R2 916 aa19.36■□□□□ 0.69
COL7A1-203ENST00000459756 EMILIN3Q9NT22 766 aa19.36■□□□□ 0.69
COL7A1-203ENST00000459756 MYPNQ86TC9 1320 aa19.35■□□□□ 0.69
COL7A1-203ENST00000459756 USP14P54578 494 aa19.35■□□□□ 0.69
COL7A1-203ENST00000459756 GIMAP6Q6P9H5 292 aa19.35■□□□□ 0.69
COL7A1-203ENST00000459756 EXOC6Q8TAG9 804 aa19.35■□□□□ 0.69
COL7A1-203ENST00000459756 DYNLL2Q96FJ2 89 aa19.35■□□□□ 0.69
COL7A1-203ENST00000459756 ZNF333Q96JL9 665 aa19.35■□□□□ 0.69
COL7A1-203ENST00000459756 C12orf42Q96LP6 360 aa19.35■□□□□ 0.69
COL7A1-203ENST00000459756 KIAA1683Q9H0B3 1180 aa19.35■□□□□ 0.69
COL7A1-203ENST00000459756 STAP2Q9UGK3 403 aa19.35■□□□□ 0.69
COL7A1-203ENST00000459756 MYH8P13535 1937 aa19.35■□□□□ 0.69
COL7A1-203ENST00000459756 MPHOSPH10O00566 681 aaKnown RBP19.34■□□□□ 0.69
COL7A1-203ENST00000459756 GNAT2P19087 354 aa19.34■□□□□ 0.69
COL7A1-203ENST00000459756 GUCY1A2P33402 732 aa19.34■□□□□ 0.69
COL7A1-203ENST00000459756 SEPT2Q15019 361 aa19.34■□□□□ 0.69
COL7A1-203ENST00000459756 CTR9Q6PD62 1173 aa19.34■□□□□ 0.69
COL7A1-203ENST00000459756 TMEM179Q6ZVK1 233 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms