RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 ASNSP08243 561 aa22.46■■□□□ 1.19
USP39-209ENST00000458268 HMGCS2P54868 508 aa22.46■■□□□ 1.19
USP39-209ENST00000458268 SP3Q02447 781 aa22.46■■□□□ 1.19
USP39-209ENST00000458268 FASTKD5Q7L8L6 764 aaKnown RBP22.46■■□□□ 1.19
USP39-209ENST00000458268 PRRT2Q7Z6L0 340 aaPredicted RBP22.46■■□□□ 1.19
USP39-209ENST00000458268 CHD1LQ86WJ1 897 aa22.46■■□□□ 1.19
USP39-209ENST00000458268 STK11IPQ8N1F8 1099 aa22.46■■□□□ 1.19
USP39-209ENST00000458268 ZNF280CQ8ND82 737 aa22.46■■□□□ 1.19
USP39-209ENST00000458268 OSBP2Q969R2 916 aa22.46■■□□□ 1.19
USP39-209ENST00000458268 DYNLL2Q96FJ2 89 aa22.46■■□□□ 1.19
USP39-209ENST00000458268 CPA4Q9UI42 421 aa22.46■■□□□ 1.19
USP39-209ENST00000458268 SALL3Q9BXA9 1300 aa22.46■■□□□ 1.19
USP39-209ENST00000458268 TRIM6-TRIM34B2RNG4 842 aa22.45■■□□□ 1.18
USP39-209ENST00000458268 M0R2C6 588 aa22.45■■□□□ 1.18
USP39-209ENST00000458268 APPP05067 770 aa22.45■■□□□ 1.18
USP39-209ENST00000458268 ZFYP08048 801 aaPredicted RBP22.45■■□□□ 1.18
USP39-209ENST00000458268 CYP2C8P10632 490 aa22.45■■□□□ 1.18
USP39-209ENST00000458268 RAB3GAP1Q15042 981 aa22.45■■□□□ 1.18
USP39-209ENST00000458268 CERKLQ49MI3 558 aaPredicted RBP22.45■■□□□ 1.18
USP39-209ENST00000458268 EHD4Q9H223 541 aa22.45■■□□□ 1.18
USP39-209ENST00000458268 TRIM17Q9Y577 477 aa22.45■■□□□ 1.18
USP39-209ENST00000458268 ZSWIM8A7E2V4 1837 aa22.45■■□□□ 1.18
USP39-209ENST00000458268 MTMR2Q13614 643 aa22.44■■□□□ 1.18
USP39-209ENST00000458268 MOGSQ13724 837 aa22.44■■□□□ 1.18
USP39-209ENST00000458268 ZYXQ15942 572 aaKnown RBP22.44■■□□□ 1.18
USP39-209ENST00000458268 ABCB5Q2M3G0 1257 aa22.44■■□□□ 1.18
USP39-209ENST00000458268 GPAT2Q6NUI2 795 aa22.44■■□□□ 1.18
USP39-209ENST00000458268 SLC44A5Q8NCS7 719 aa22.44■■□□□ 1.18
USP39-209ENST00000458268 ERO1AQ96HE7 468 aa22.44■■□□□ 1.18
USP39-209ENST00000458268 SEC62Q99442 399 aaKnown RBP22.44■■□□□ 1.18
USP39-209ENST00000458268 ATP8A2Q9NTI2 1148 aa22.44■■□□□ 1.18
USP39-209ENST00000458268 USP17L12C9JPN9 530 aa22.43■■□□□ 1.18
USP39-209ENST00000458268 USP17L21D6R901 530 aa22.43■■□□□ 1.18
USP39-209ENST00000458268 GPAA1O43292 621 aa22.43■■□□□ 1.18
USP39-209ENST00000458268 METTL16Q86W50 562 aaKnown RBP22.43■■□□□ 1.18
USP39-209ENST00000458268 RILPL2Q969X0 211 aa22.43■■□□□ 1.18
USP39-209ENST00000458268 PARK7Q99497 189 aaKnown RBP22.43■■□□□ 1.18
USP39-209ENST00000458268 FEZ1Q99689 392 aa22.43■■□□□ 1.18
USP39-209ENST00000458268 CABP5Q9NP86 173 aa22.43■■□□□ 1.18
USP39-209ENST00000458268 SMIM22K7EJ46 135 aa22.42■■□□□ 1.18
USP39-209ENST00000458268 TLR2O60603 784 aa22.42■■□□□ 1.18
USP39-209ENST00000458268 SHMT1P34896 483 aa22.42■■□□□ 1.18
USP39-209ENST00000458268 NUCB1Q02818 461 aa22.42■■□□□ 1.18
USP39-209ENST00000458268 NOM1Q5C9Z4 860 aaKnown RBP22.42■■□□□ 1.18
USP39-209ENST00000458268 TREML2Q5T2D2 321 aa22.42■■□□□ 1.18
USP39-209ENST00000458268 STRBPQ96SI9 672 aaKnown RBP22.42■■□□□ 1.18
USP39-209ENST00000458268 ZCCHC17Q9NP64 241 aaKnown RBP22.42■■□□□ 1.18
USP39-209ENST00000458268 STAP2Q9UGK3 403 aa22.42■■□□□ 1.18
USP39-209ENST00000458268 LOC285556D6RIA3 1793 aa22.42■■□□□ 1.18
USP39-209ENST00000458268 TDO2P48775 406 aa22.41■■□□□ 1.18
USP39-209ENST00000458268 TATDN1Q6P1N9 297 aa22.41■■□□□ 1.18
USP39-209ENST00000458268 SMCR8Q8TEV9 937 aaPredicted RBP22.41■■□□□ 1.18
USP39-209ENST00000458268 TMOD4Q9NZQ9 345 aa22.41■■□□□ 1.18
USP39-209ENST00000458268 MINDY4BA8MYZ0 360 aa22.4■■□□□ 1.18
USP39-209ENST00000458268 KIF22Q14807 665 aa22.4■■□□□ 1.18
USP39-209ENST00000458268 EVI5LQ96CN4 794 aa22.4■■□□□ 1.18
USP39-209ENST00000458268 TBC1D2Q9BYX2 928 aa22.4■■□□□ 1.18
USP39-209ENST00000458268 EFCC1Q9HA90 598 aa22.4■■□□□ 1.18
USP39-209ENST00000458268 AGTPBP1Q9UPW5 1226 aa22.4■■□□□ 1.18
USP39-209ENST00000458268 CTR9Q6PD62 1173 aa22.39■■□□□ 1.17
USP39-209ENST00000458268 CCDC129Q6ZRS4 1044 aa22.39■■□□□ 1.17
USP39-209ENST00000458268 OTOP1Q7RTM1 612 aa22.39■■□□□ 1.17
USP39-209ENST00000458268 USP17L10C9JJH3 530 aa22.38■■□□□ 1.17
USP39-209ENST00000458268 SEPT2Q15019 361 aa22.38■■□□□ 1.17
USP39-209ENST00000458268 ZMYM1Q5SVZ6 1142 aa22.38■■□□□ 1.17
USP39-209ENST00000458268 C12orf60Q5U649 245 aa22.38■■□□□ 1.17
USP39-209ENST00000458268 PLEKHM2Q8IWE5 1019 aa22.38■■□□□ 1.17
USP39-209ENST00000458268 WDR18Q9BV38 432 aa22.38■■□□□ 1.17
USP39-209ENST00000458268 ARHGAP39Q9C0H5 1083 aa22.38■■□□□ 1.17
USP39-209ENST00000458268 GINM1Q9NU53 330 aa22.38■■□□□ 1.17
USP39-209ENST00000458268 ARPP21Q9UBL0 812 aaPredicted RBP22.38■■□□□ 1.17
USP39-209ENST00000458268 SWAP70Q9UH65 585 aa22.38■■□□□ 1.17
USP39-209ENST00000458268 GSG1L2A8MUP6 293 aa22.37■■□□□ 1.17
USP39-209ENST00000458268 BACE1P56817 501 aa22.37■■□□□ 1.17
USP39-209ENST00000458268 GABPAQ06546 454 aa22.37■■□□□ 1.17
USP39-209ENST00000458268 PROCA1Q8NCQ7 364 aaPredicted RBP22.37■■□□□ 1.17
USP39-209ENST00000458268 EPB41L4AQ9HCS5 686 aaPredicted RBP22.37■■□□□ 1.17
USP39-209ENST00000458268 GNAT2P19087 354 aa22.36■■□□□ 1.17
USP39-209ENST00000458268 CDK8P49336 464 aa22.36■■□□□ 1.17
USP39-209ENST00000458268 CAP1Q01518 475 aa22.36■■□□□ 1.17
USP39-209ENST00000458268 ATP2B2Q01814 1243 aa22.36■■□□□ 1.17
USP39-209ENST00000458268 PABPC4Q13310 644 aaKnown RBP eCLIP22.36■■□□□ 1.17
USP39-209ENST00000458268 CLEC10AQ8IUN9 316 aa22.36■■□□□ 1.17
USP39-209ENST00000458268 PNMA3Q9UL41 463 aa22.36■■□□□ 1.17
USP39-209ENST00000458268 HPS5Q9UPZ3 1129 aa22.36■■□□□ 1.17
USP39-209ENST00000458268 AKR1B1P15121 316 aa22.35■■□□□ 1.17
USP39-209ENST00000458268 OSBPP22059 807 aa22.35■■□□□ 1.17
USP39-209ENST00000458268 IRX3P78415 501 aaPredicted RBP22.35■■□□□ 1.17
USP39-209ENST00000458268 LACTBP83111 547 aaPredicted RBP22.35■■□□□ 1.17
USP39-209ENST00000458268 PKN2Q16513 984 aaKnown RBP22.35■■□□□ 1.17
USP39-209ENST00000458268 FBXO46Q6PJ61 603 aaPredicted RBP22.35■■□□□ 1.17
USP39-209ENST00000458268 C17orf99Q6UX52 265 aa22.35■■□□□ 1.17
USP39-209ENST00000458268 ACER1Q8TDN7 264 aa22.35■■□□□ 1.17
USP39-209ENST00000458268 NACAP1Q9BZK3 213 aa22.35■■□□□ 1.17
USP39-209ENST00000458268 C19orf81C9J6K1 198 aa22.34■■□□□ 1.17
USP39-209ENST00000458268 FMNL1O95466 1100 aaPredicted RBP22.34■■□□□ 1.17
USP39-209ENST00000458268 ARHGEF6Q15052 776 aa22.34■■□□□ 1.17
USP39-209ENST00000458268 SH3D19Q5HYK7 790 aa22.34■■□□□ 1.17
USP39-209ENST00000458268 USP17L2Q6R6M4 530 aa22.34■■□□□ 1.17
USP39-209ENST00000458268 C16orf86Q6ZW13 317 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms