RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 MAP4K4O95819 1239 aaPredicted RBP17.73■□□□□ 0.43
UPF3AP2-201ENST00000457924 HMGCRP04035 888 aa17.73■□□□□ 0.43
UPF3AP2-201ENST00000457924 LDHCP07864 332 aa17.73■□□□□ 0.43
UPF3AP2-201ENST00000457924 GSTO1P78417 241 aa17.73■□□□□ 0.43
UPF3AP2-201ENST00000457924 DIS3LQ8TF46 1054 aaKnown RBP17.73■□□□□ 0.43
UPF3AP2-201ENST00000457924 API5Q9BZZ5 524 aaKnown RBP17.73■□□□□ 0.43
UPF3AP2-201ENST00000457924 NOB1Q9ULX3 412 aaKnown RBP17.73■□□□□ 0.43
UPF3AP2-201ENST00000457924 ZNF316A6NFI3 1004 aaPredicted RBP17.72■□□□□ 0.43
UPF3AP2-201ENST00000457924 DLL1O00548 723 aa17.72■□□□□ 0.43
UPF3AP2-201ENST00000457924 HMGCS2P54868 508 aa17.72■□□□□ 0.43
UPF3AP2-201ENST00000457924 LRCH3Q96II8 777 aa17.72■□□□□ 0.43
UPF3AP2-201ENST00000457924 AS3MTQ9HBK9 375 aa17.72■□□□□ 0.43
UPF3AP2-201ENST00000457924 HMX1Q9NP08 348 aaPredicted RBP17.72■□□□□ 0.43
UPF3AP2-201ENST00000457924 RPTORQ8N122 1335 aa17.72■□□□□ 0.43
UPF3AP2-201ENST00000457924 COL2A1P02458 1487 aaPredicted RBP17.71■□□□□ 0.43
UPF3AP2-201ENST00000457924 USP17L5A8MUK1 530 aa17.71■□□□□ 0.43
UPF3AP2-201ENST00000457924 CAP2P40123 477 aa17.71■□□□□ 0.43
UPF3AP2-201ENST00000457924 TFCP2Q12800 502 aa17.71■□□□□ 0.43
UPF3AP2-201ENST00000457924 C7orf61Q8IZ16 206 aa17.71■□□□□ 0.43
UPF3AP2-201ENST00000457924 NEUROD6Q96NK8 337 aa17.71■□□□□ 0.43
UPF3AP2-201ENST00000457924 NBPF3Q9H094 633 aa17.71■□□□□ 0.43
UPF3AP2-201ENST00000457924 SRGAP3O43295 1099 aa17.7■□□□□ 0.42
UPF3AP2-201ENST00000457924 BMP8BP34820 402 aa17.7■□□□□ 0.42
UPF3AP2-201ENST00000457924 GORABQ5T7V8 394 aa17.7■□□□□ 0.42
UPF3AP2-201ENST00000457924 SPATA5Q8NB90 893 aa17.7■□□□□ 0.42
UPF3AP2-201ENST00000457924 ZNF384Q8TF68 577 aa17.7■□□□□ 0.42
UPF3AP2-201ENST00000457924 NSUN4Q96CB9 384 aaKnown RBP17.7■□□□□ 0.42
UPF3AP2-201ENST00000457924 CDCA7LQ96GN5 454 aa17.7■□□□□ 0.42
UPF3AP2-201ENST00000457924 MEIS3Q99687 375 aa17.7■□□□□ 0.42
UPF3AP2-201ENST00000457924 GDF15Q99988 308 aa17.7■□□□□ 0.42
UPF3AP2-201ENST00000457924 ASCC2Q9H1I8 757 aaPredicted RBP17.7■□□□□ 0.42
UPF3AP2-201ENST00000457924 RAI14Q9P0K7 980 aa17.7■□□□□ 0.42
UPF3AP2-201ENST00000457924 HMG20BQ9P0W2 317 aa17.7■□□□□ 0.42
UPF3AP2-201ENST00000457924 GJD2Q9UKL4 321 aa17.7■□□□□ 0.42
UPF3AP2-201ENST00000457924 CT47B1P0C2W7 299 aaPredicted RBP17.69■□□□□ 0.42
UPF3AP2-201ENST00000457924 SH3D19Q5HYK7 790 aa17.69■□□□□ 0.42
UPF3AP2-201ENST00000457924 RYDENQ9NUL5 291 aaKnown RBP17.69■□□□□ 0.42
UPF3AP2-201ENST00000457924 HERC5Q9UII4 1024 aaKnown RBP17.69■□□□□ 0.42
UPF3AP2-201ENST00000457924 ZMYND8Q9ULU4 1186 aaPredicted RBP17.69■□□□□ 0.42
UPF3AP2-201ENST00000457924 DDX60LQ5H9U9 1706 aaKnown RBP17.69■□□□□ 0.42
UPF3AP2-201ENST00000457924 GNAI3P08754 354 aa17.68■□□□□ 0.42
UPF3AP2-201ENST00000457924 IRX3P78415 501 aaPredicted RBP17.68■□□□□ 0.42
UPF3AP2-201ENST00000457924 TRIM32Q13049 653 aa17.68■□□□□ 0.42
UPF3AP2-201ENST00000457924 TBC1D9Q6ZT07 1266 aa17.68■□□□□ 0.42
UPF3AP2-201ENST00000457924 TEX11Q8IYF3 940 aa17.68■□□□□ 0.42
UPF3AP2-201ENST00000457924 NOL10Q9BSC4 688 aaKnown RBP17.68■□□□□ 0.42
UPF3AP2-201ENST00000457924 C11orf49Q9H6J7 331 aa17.68■□□□□ 0.42
UPF3AP2-201ENST00000457924 TMOD4Q9NZQ9 345 aa17.68■□□□□ 0.42
UPF3AP2-201ENST00000457924 MORF4L1Q9UBU8 362 aa17.68■□□□□ 0.42
UPF3AP2-201ENST00000457924 PLXNB2O15031 1838 aa17.68■□□□□ 0.42
UPF3AP2-201ENST00000457924 POTEB2H3BUK9 544 aa17.67■□□□□ 0.42
UPF3AP2-201ENST00000457924 RRP1BQ14684 758 aaKnown RBP17.67■□□□□ 0.42
UPF3AP2-201ENST00000457924 GPR153Q6NV75 609 aa17.67■□□□□ 0.42
UPF3AP2-201ENST00000457924 TRIB2Q92519 343 aa17.67■□□□□ 0.42
UPF3AP2-201ENST00000457924 PI4KBQ9UBF8 816 aa17.67■□□□□ 0.42
UPF3AP2-201ENST00000457924 CYP2B6P20813 491 aa17.66■□□□□ 0.42
UPF3AP2-201ENST00000457924 BACE1P56817 501 aa17.66■□□□□ 0.42
UPF3AP2-201ENST00000457924 MTMR2Q13614 643 aa17.66■□□□□ 0.42
UPF3AP2-201ENST00000457924 PI16Q6UXB8 463 aa17.66■□□□□ 0.42
UPF3AP2-201ENST00000457924 TRMT2AQ8IZ69 625 aaKnown RBP17.66■□□□□ 0.42
UPF3AP2-201ENST00000457924 SPRYD3Q8NCJ5 442 aa17.66■□□□□ 0.42
UPF3AP2-201ENST00000457924 NUDT12Q9BQG2 462 aa17.66■□□□□ 0.42
UPF3AP2-201ENST00000457924 WDR18Q9BV38 432 aa17.66■□□□□ 0.42
UPF3AP2-201ENST00000457924 DHX36Q9H2U1 1008 aaKnown RBP17.66■□□□□ 0.42
UPF3AP2-201ENST00000457924 LRP2BPQ9P2M1 347 aa17.66■□□□□ 0.42
UPF3AP2-201ENST00000457924 OGDHLQ9ULD0 1010 aa17.66■□□□□ 0.42
UPF3AP2-201ENST00000457924 PPP1R37O75864 691 aa17.65■□□□□ 0.42
UPF3AP2-201ENST00000457924 ASNSP08243 561 aa17.65■□□□□ 0.42
UPF3AP2-201ENST00000457924 SYN1P17600 705 aa17.65■□□□□ 0.42
UPF3AP2-201ENST00000457924 ARID4AP29374 1257 aaPredicted RBP17.65■□□□□ 0.42
UPF3AP2-201ENST00000457924 HOXA7P31268 230 aaPredicted RBP17.65■□□□□ 0.42
UPF3AP2-201ENST00000457924 MTX1Q13505 466 aa17.65■□□□□ 0.42
UPF3AP2-201ENST00000457924 GPRC5AQ8NFJ5 357 aa17.65■□□□□ 0.42
UPF3AP2-201ENST00000457924 SH3RF3Q8TEJ3 882 aaPredicted RBP17.65■□□□□ 0.42
UPF3AP2-201ENST00000457924 SOCS4Q8WXH5 440 aa17.65■□□□□ 0.42
UPF3AP2-201ENST00000457924 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.65■□□□□ 0.42
UPF3AP2-201ENST00000457924 LAMA3Q16787 3333 aa17.64■□□□□ 0.41
UPF3AP2-201ENST00000457924 C19orf81C9J6K1 198 aa17.64■□□□□ 0.41
UPF3AP2-201ENST00000457924 BAG3O95817 575 aa17.64■□□□□ 0.41
UPF3AP2-201ENST00000457924 UQCRFS1P1P0C7P4 283 aa17.64■□□□□ 0.41
UPF3AP2-201ENST00000457924 XRCC5P13010 732 aaKnown RBP17.64■□□□□ 0.41
UPF3AP2-201ENST00000457924 PDE3AQ14432 1141 aa17.64■□□□□ 0.41
UPF3AP2-201ENST00000457924 TRMT44Q8IYL2 757 aaKnown RBP17.64■□□□□ 0.41
UPF3AP2-201ENST00000457924 DEFB123Q8N688 67 aa17.64■□□□□ 0.41
UPF3AP2-201ENST00000457924 P2RX7Q99572 595 aaKnown RBP17.64■□□□□ 0.41
UPF3AP2-201ENST00000457924 TRIM34Q9BYJ4 488 aa17.64■□□□□ 0.41
UPF3AP2-201ENST00000457924 MCAMP43121 646 aa17.63■□□□□ 0.41
UPF3AP2-201ENST00000457924 MAGEA10P43363 369 aaPredicted RBP17.63■□□□□ 0.41
UPF3AP2-201ENST00000457924 HERVK_113P62684 666 aa17.63■□□□□ 0.41
UPF3AP2-201ENST00000457924 LRIT3Q3SXY7 679 aa17.63■□□□□ 0.41
UPF3AP2-201ENST00000457924 MAP3K21Q5TCX8 1036 aa17.63■□□□□ 0.41
UPF3AP2-201ENST00000457924 CCAR1Q8IX12 1150 aaKnown RBP17.63■□□□□ 0.41
UPF3AP2-201ENST00000457924 TDHQ8IZJ6 230 aa17.63■□□□□ 0.41
UPF3AP2-201ENST00000457924 ARHGAP45Q92619 1136 aa17.63■□□□□ 0.41
UPF3AP2-201ENST00000457924 AATFQ9NY61 560 aaKnown RBP eCLIP17.63■□□□□ 0.41
UPF3AP2-201ENST00000457924 SIPA1L1O43166 1804 aa17.63■□□□□ 0.41
UPF3AP2-201ENST00000457924 USP17L10C9JJH3 530 aa17.62■□□□□ 0.41
UPF3AP2-201ENST00000457924 ZKSCAN1P17029 563 aaPredicted RBP17.62■□□□□ 0.41
UPF3AP2-201ENST00000457924 MAPK4P31152 587 aa17.62■□□□□ 0.41
UPF3AP2-201ENST00000457924 G3BP1Q13283 466 aaKnown RBP eCLIP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms