RNA–Protein interactions for RNA: ENST00000457226.2

SMARCA2-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-216ENST00000457226 MTMR2Q13614 643 aa16.29■□□□□ 0.2
SMARCA2-216ENST00000457226 RRP1BQ14684 758 aaKnown RBP16.29■□□□□ 0.2
SMARCA2-216ENST00000457226 GTF3C2Q8WUA4 911 aaPredicted RBP16.29■□□□□ 0.2
SMARCA2-216ENST00000457226 CRNKL1Q9BZJ0 848 aaKnown RBP16.29■□□□□ 0.2
SMARCA2-216ENST00000457226 ASCC2Q9H1I8 757 aaPredicted RBP16.29■□□□□ 0.2
SMARCA2-216ENST00000457226 ZBTB21Q9ULJ3 1066 aa16.29■□□□□ 0.2
SMARCA2-216ENST00000457226 MAGEB6P1A0A0J9YX57 407 aa16.28■□□□□ 0.2
SMARCA2-216ENST00000457226 ADCY3O60266 1144 aa16.28■□□□□ 0.2
SMARCA2-216ENST00000457226 CCL5P13501 91 aa16.28■□□□□ 0.2
SMARCA2-216ENST00000457226 SLC9C2Q5TAH2 1124 aa16.28■□□□□ 0.2
SMARCA2-216ENST00000457226 TATDN1Q6P1N9 297 aa16.28■□□□□ 0.2
SMARCA2-216ENST00000457226 RNF208Q9H0X6 261 aa16.28■□□□□ 0.2
SMARCA2-216ENST00000457226 ANTXR1Q9H6X2 564 aa16.28■□□□□ 0.2
SMARCA2-216ENST00000457226 DNAJC18Q9H819 358 aa16.28■□□□□ 0.2
SMARCA2-216ENST00000457226 PHIPQ8WWQ0 1821 aa16.28■□□□□ 0.2
SMARCA2-216ENST00000457226 APBB1O00213 710 aa16.27■□□□□ 0.2
SMARCA2-216ENST00000457226 GJA8P48165 433 aa16.27■□□□□ 0.2
SMARCA2-216ENST00000457226 RIOK1Q9BRS2 568 aaKnown RBP16.27■□□□□ 0.2
SMARCA2-216ENST00000457226 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.27■□□□□ 0.2
SMARCA2-216ENST00000457226 MORF4L1Q9UBU8 362 aa16.27■□□□□ 0.2
SMARCA2-216ENST00000457226 LOC285556D6RIA3 1793 aa16.27■□□□□ 0.2
SMARCA2-216ENST00000457226 CENPFP49454 3210 aa16.26■□□□□ 0.19
SMARCA2-216ENST00000457226 GOLIM4O00461 696 aa16.26■□□□□ 0.19
SMARCA2-216ENST00000457226 GDF11O95390 407 aa16.26■□□□□ 0.19
SMARCA2-216ENST00000457226 PDE6AP16499 860 aa16.26■□□□□ 0.19
SMARCA2-216ENST00000457226 USP14P54578 494 aa16.26■□□□□ 0.19
SMARCA2-216ENST00000457226 MTFR1Q15390 333 aa16.26■□□□□ 0.19
SMARCA2-216ENST00000457226 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
SMARCA2-216ENST00000457226 SIRT2Q8IXJ6 389 aa16.26■□□□□ 0.19
SMARCA2-216ENST00000457226 DNAJC2Q99543 621 aaKnown RBP16.26■□□□□ 0.19
SMARCA2-216ENST00000457226 CABP5Q9NP86 173 aa16.26■□□□□ 0.19
SMARCA2-216ENST00000457226 GABRQQ9UN88 632 aa16.26■□□□□ 0.19
SMARCA2-216ENST00000457226 NDUFB9Q9Y6M9 179 aa16.26■□□□□ 0.19
SMARCA2-216ENST00000457226 FOCADQ5VW36 1801 aa16.26■□□□□ 0.19
SMARCA2-216ENST00000457226 PTPRFP10586 1907 aa16.25■□□□□ 0.19
SMARCA2-216ENST00000457226 ZSWIM8A7E2V4 1837 aa16.25■□□□□ 0.19
SMARCA2-216ENST00000457226 GH2P01242 217 aa16.25■□□□□ 0.19
SMARCA2-216ENST00000457226 POLR3DP05423 398 aaPredicted RBP16.25■□□□□ 0.19
SMARCA2-216ENST00000457226 ATP5JP18859 108 aa16.25■□□□□ 0.19
SMARCA2-216ENST00000457226 CERKLQ49MI3 558 aaPredicted RBP16.25■□□□□ 0.19
SMARCA2-216ENST00000457226 FEZ1Q99689 392 aa16.25■□□□□ 0.19
SMARCA2-216ENST00000457226 PAG1Q9NWQ8 432 aa16.25■□□□□ 0.19
SMARCA2-216ENST00000457226 ZNF532Q9HCE3 1301 aa16.24■□□□□ 0.19
SMARCA2-216ENST00000457226 INHAP05111 366 aa16.24■□□□□ 0.19
SMARCA2-216ENST00000457226 HERVK_113P62684 666 aa16.24■□□□□ 0.19
SMARCA2-216ENST00000457226 ABCB5Q2M3G0 1257 aa16.24■□□□□ 0.19
SMARCA2-216ENST00000457226 ZSCAN25Q6NSZ9 544 aa16.24■□□□□ 0.19
SMARCA2-216ENST00000457226 CCAR1Q8IX12 1150 aaKnown RBP16.24■□□□□ 0.19
SMARCA2-216ENST00000457226 GPRC5AQ8NFJ5 357 aa16.24■□□□□ 0.19
SMARCA2-216ENST00000457226 C12orf42Q96LP6 360 aa16.24■□□□□ 0.19
SMARCA2-216ENST00000457226 HTATIP2Q9BUP3 242 aa16.24■□□□□ 0.19
SMARCA2-216ENST00000457226 LRRCC1Q9C099 1032 aa16.24■□□□□ 0.19
SMARCA2-216ENST00000457226 ATAD5Q96QE3 1844 aa16.24■□□□□ 0.19
SMARCA2-216ENST00000457226 MAPK4P31152 587 aa16.23■□□□□ 0.19
SMARCA2-216ENST00000457226 JAG1P78504 1218 aa16.23■□□□□ 0.19
SMARCA2-216ENST00000457226 AMOTL1Q8IY63 956 aa16.23■□□□□ 0.19
SMARCA2-216ENST00000457226 U2AF1L4Q8WU68 220 aaKnown RBP16.23■□□□□ 0.19
SMARCA2-216ENST00000457226 SOCS4Q8WXH5 440 aa16.23■□□□□ 0.19
SMARCA2-216ENST00000457226 DDRGK1Q96HY6 314 aa16.23■□□□□ 0.19
SMARCA2-216ENST00000457226 KIAA1683Q9H0B3 1180 aa16.23■□□□□ 0.19
SMARCA2-216ENST00000457226 MCM9Q9NXL9 1143 aa16.23■□□□□ 0.19
SMARCA2-216ENST00000457226 SIPA1L1O43166 1804 aa16.23■□□□□ 0.19
SMARCA2-216ENST00000457226 SGPL1O95470 568 aa16.22■□□□□ 0.19
SMARCA2-216ENST00000457226 HMGCRP04035 888 aa16.22■□□□□ 0.19
SMARCA2-216ENST00000457226 ELNP15502 786 aa16.22■□□□□ 0.19
SMARCA2-216ENST00000457226 RAB3GAP1Q15042 981 aa16.22■□□□□ 0.19
SMARCA2-216ENST00000457226 TRMT44Q8IYL2 757 aaKnown RBP16.22■□□□□ 0.19
SMARCA2-216ENST00000457226 SHISA4Q96DD7 197 aa16.22■□□□□ 0.19
SMARCA2-216ENST00000457226 P2RX7Q99572 595 aaKnown RBP16.22■□□□□ 0.19
SMARCA2-216ENST00000457226 HAUS7Q99871 368 aa16.22■□□□□ 0.19
SMARCA2-216ENST00000457226 ATP8A2Q9NTI2 1148 aa16.22■□□□□ 0.19
SMARCA2-216ENST00000457226 SWAP70Q9UH65 585 aa16.22■□□□□ 0.19
SMARCA2-216ENST00000457226 TCRBV5S4A2TA0A5A2 114 aa16.21■□□□□ 0.19
SMARCA2-216ENST00000457226 USP17L15C9J2P7 530 aa16.21■□□□□ 0.19
SMARCA2-216ENST00000457226 USP17L13C9JLJ4 530 aa16.21■□□□□ 0.19
SMARCA2-216ENST00000457226 USP17L11C9JVI0 530 aa16.21■□□□□ 0.19
SMARCA2-216ENST00000457226 USP17L18D6R9N7 530 aa16.21■□□□□ 0.19
SMARCA2-216ENST00000457226 USP17L22D6RA61 530 aa16.21■□□□□ 0.19
SMARCA2-216ENST00000457226 USP17L17D6RBQ6 530 aa16.21■□□□□ 0.19
SMARCA2-216ENST00000457226 USP17L19D6RCP7 530 aa16.21■□□□□ 0.19
SMARCA2-216ENST00000457226 USP17L20D6RJB6 530 aa16.21■□□□□ 0.19
SMARCA2-216ENST00000457226 CCNA1P78396 465 aa16.21■□□□□ 0.19
SMARCA2-216ENST00000457226 USP17L24Q0WX57 530 aa16.21■□□□□ 0.19
SMARCA2-216ENST00000457226 GPATCH3Q96I76 525 aa16.21■□□□□ 0.19
SMARCA2-216ENST00000457226 BCL11AQ9H165 835 aa16.21■□□□□ 0.19
SMARCA2-216ENST00000457226 UNC93B1Q9H1C4 597 aa16.21■□□□□ 0.19
SMARCA2-216ENST00000457226 EMILIN3Q9NT22 766 aa16.21■□□□□ 0.19
SMARCA2-216ENST00000457226 MGAMO43451 1857 aa16.2■□□□□ 0.18
SMARCA2-216ENST00000457226 CDK5RAP2Q96SN8 1893 aa16.2■□□□□ 0.18
SMARCA2-216ENST00000457226 GLRX3O76003 335 aaKnown RBP16.2■□□□□ 0.18
SMARCA2-216ENST00000457226 XRCC5P13010 732 aaKnown RBP16.2■□□□□ 0.18
SMARCA2-216ENST00000457226 SHMT1P34896 483 aa16.2■□□□□ 0.18
SMARCA2-216ENST00000457226 ADD2P35612 726 aa16.2■□□□□ 0.18
SMARCA2-216ENST00000457226 PLCD1P51178 756 aa16.2■□□□□ 0.18
SMARCA2-216ENST00000457226 GABPAQ06546 454 aa16.2■□□□□ 0.18
SMARCA2-216ENST00000457226 UBE3CQ15386 1083 aa16.2■□□□□ 0.18
SMARCA2-216ENST00000457226 NUDT12Q9BQG2 462 aa16.2■□□□□ 0.18
SMARCA2-216ENST00000457226 BOLA2Q9H3K6 86 aa16.2■□□□□ 0.18
SMARCA2-216ENST00000457226 DCP1AQ9NPI6 582 aaPredicted RBP16.2■□□□□ 0.18
SMARCA2-216ENST00000457226 PAK6Q9NQU5 681 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms