RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 ZMYM6O95789 1325 aa16.74■□□□□ 0.27
TIMP1-205ENST00000456754 GH2P01242 217 aa16.74■□□□□ 0.27
TIMP1-205ENST00000456754 RASA1P20936 1047 aa16.74■□□□□ 0.27
TIMP1-205ENST00000456754 DGKZQ13574 1117 aa16.74■□□□□ 0.27
TIMP1-205ENST00000456754 COL9A3Q14050 684 aaPredicted RBP16.74■□□□□ 0.27
TIMP1-205ENST00000456754 CERKLQ49MI3 558 aaPredicted RBP16.74■□□□□ 0.27
TIMP1-205ENST00000456754 NOL9Q5SY16 702 aaKnown RBP16.74■□□□□ 0.27
TIMP1-205ENST00000456754 MAP4K1Q92918 833 aa16.74■□□□□ 0.27
TIMP1-205ENST00000456754 OPTNQ96CV9 577 aa16.74■□□□□ 0.27
TIMP1-205ENST00000456754 SLC10A4Q96EP9 437 aa16.74■□□□□ 0.27
TIMP1-205ENST00000456754 OTUD5Q96G74 571 aa16.74■□□□□ 0.27
TIMP1-205ENST00000456754 WNK4Q96J92 1243 aa16.74■□□□□ 0.27
TIMP1-205ENST00000456754 CAPNS2Q96L46 248 aa16.74■□□□□ 0.27
TIMP1-205ENST00000456754 ZBTB21Q9ULJ3 1066 aa16.74■□□□□ 0.27
TIMP1-205ENST00000456754 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.74■□□□□ 0.27
TIMP1-205ENST00000456754 CSADQ9Y600 493 aa16.74■□□□□ 0.27
TIMP1-205ENST00000456754 NEDD4P46934 1319 aa16.73■□□□□ 0.27
TIMP1-205ENST00000456754 GREB1LQ9C091 1923 aaPredicted RBP16.73■□□□□ 0.27
TIMP1-205ENST00000456754 CTNND1O60716 968 aaKnown RBP16.73■□□□□ 0.27
TIMP1-205ENST00000456754 SEC24BO95487 1268 aa16.73■□□□□ 0.27
TIMP1-205ENST00000456754 SLC10A3P09131 477 aa16.73■□□□□ 0.27
TIMP1-205ENST00000456754 PTPRAP18433 802 aa16.73■□□□□ 0.27
TIMP1-205ENST00000456754 FAM47AQ5JRC9 791 aa16.73■□□□□ 0.27
TIMP1-205ENST00000456754 CASC1Q6TDU7 716 aa16.73■□□□□ 0.27
TIMP1-205ENST00000456754 DNAJC5GQ8N7S2 189 aa16.73■□□□□ 0.27
TIMP1-205ENST00000456754 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.73■□□□□ 0.27
TIMP1-205ENST00000456754 ANAPC4Q9UJX5 808 aa16.73■□□□□ 0.27
TIMP1-205ENST00000456754 PTPRFP10586 1907 aa16.72■□□□□ 0.27
TIMP1-205ENST00000456754 SPDYE5A6NIY4 337 aa16.72■□□□□ 0.27
TIMP1-205ENST00000456754 MPHOSPH10O00566 681 aaKnown RBP16.72■□□□□ 0.27
TIMP1-205ENST00000456754 CYP21A2P08686 494 aa16.72■□□□□ 0.27
TIMP1-205ENST00000456754 SEPT2Q15019 361 aa16.72■□□□□ 0.27
TIMP1-205ENST00000456754 ABCB5Q2M3G0 1257 aa16.72■□□□□ 0.27
TIMP1-205ENST00000456754 C8orf34Q49A92 452 aa16.72■□□□□ 0.27
TIMP1-205ENST00000456754 SPRYD7Q5W111 196 aa16.72■□□□□ 0.27
TIMP1-205ENST00000456754 KIAA1211Q6ZU35 1233 aa16.72■□□□□ 0.27
TIMP1-205ENST00000456754 STOX1Q6ZVD7 989 aa16.72■□□□□ 0.27
TIMP1-205ENST00000456754 SWAP70Q9UH65 585 aa16.72■□□□□ 0.27
TIMP1-205ENST00000456754 WDR33Q9C0J8 1336 aaKnown RBP16.71■□□□□ 0.27
TIMP1-205ENST00000456754 ZNF213O14771 459 aa16.71■□□□□ 0.27
TIMP1-205ENST00000456754 IRF6O14896 467 aa16.71■□□□□ 0.27
TIMP1-205ENST00000456754 RAB3GAP1Q15042 981 aa16.71■□□□□ 0.27
TIMP1-205ENST00000456754 RRP12Q5JTH9 1297 aaKnown RBP16.71■□□□□ 0.27
TIMP1-205ENST00000456754 HHIPL1Q96JK4 782 aa16.71■□□□□ 0.27
TIMP1-205ENST00000456754 MKNK2Q9HBH9 465 aa16.71■□□□□ 0.27
TIMP1-205ENST00000456754 PICK1Q9NRD5 415 aa16.71■□□□□ 0.27
TIMP1-205ENST00000456754 ZHX2Q9Y6X8 837 aa16.71■□□□□ 0.27
TIMP1-205ENST00000456754 U3KPZ7 1027 aaPredicted RBP16.71■□□□□ 0.27
TIMP1-205ENST00000456754 NMT2O60551 498 aa16.7■□□□□ 0.26
TIMP1-205ENST00000456754 ERO1BQ86YB8 467 aa16.7■□□□□ 0.26
TIMP1-205ENST00000456754 ACER1Q8TDN7 264 aa16.7■□□□□ 0.26
TIMP1-205ENST00000456754 SLC27A2O14975 620 aa16.69■□□□□ 0.26
TIMP1-205ENST00000456754 FGRP09769 529 aa16.69■□□□□ 0.26
TIMP1-205ENST00000456754 KIF23Q02241 960 aaPredicted RBP16.69■□□□□ 0.26
TIMP1-205ENST00000456754 NECTIN1Q15223 517 aa16.69■□□□□ 0.26
TIMP1-205ENST00000456754 IMMTQ16891 758 aaKnown RBP16.69■□□□□ 0.26
TIMP1-205ENST00000456754 AKNAD1Q5T1N1 836 aa16.69■□□□□ 0.26
TIMP1-205ENST00000456754 CREB3L3Q68CJ9 461 aa16.69■□□□□ 0.26
TIMP1-205ENST00000456754 SIAH1Q8IUQ4 282 aa16.69■□□□□ 0.26
TIMP1-205ENST00000456754 STAG1Q8WVM7 1258 aa16.69■□□□□ 0.26
TIMP1-205ENST00000456754 TOMM22Q9NS69 142 aa16.69■□□□□ 0.26
TIMP1-205ENST00000456754 CTNNA3Q9UI47 895 aa16.69■□□□□ 0.26
TIMP1-205ENST00000456754 THSD7BQ9C0I4 1608 aa16.69■□□□□ 0.26
TIMP1-205ENST00000456754 TRIM75PA6NK02 468 aa16.68■□□□□ 0.26
TIMP1-205ENST00000456754 RANBP6O60518 1105 aaKnown RBP16.68■□□□□ 0.26
TIMP1-205ENST00000456754 ECE1P42892 770 aa16.68■□□□□ 0.26
TIMP1-205ENST00000456754 TFAP4Q01664 338 aa16.68■□□□□ 0.26
TIMP1-205ENST00000456754 PDE4BQ07343 736 aa16.68■□□□□ 0.26
TIMP1-205ENST00000456754 SPP2Q13103 211 aa16.68■□□□□ 0.26
TIMP1-205ENST00000456754 PPIL2Q13356 520 aa16.68■□□□□ 0.26
TIMP1-205ENST00000456754 RASEFQ8IZ41 740 aa16.68■□□□□ 0.26
TIMP1-205ENST00000456754 MS4A4AQ96JQ5 239 aa16.68■□□□□ 0.26
TIMP1-205ENST00000456754 AFG3L2Q9Y4W6 797 aa16.68■□□□□ 0.26
TIMP1-205ENST00000456754 CEP350Q5VT06 3117 aa16.68■□□□□ 0.26
TIMP1-205ENST00000456754 A0A1W2PRG0 241 aa16.67■□□□□ 0.26
TIMP1-205ENST00000456754 USP17L5A8MUK1 530 aa16.67■□□□□ 0.26
TIMP1-205ENST00000456754 B4E1Z4 1266 aa16.67■□□□□ 0.26
TIMP1-205ENST00000456754 ORC4O43929 436 aa16.67■□□□□ 0.26
TIMP1-205ENST00000456754 SLC3A2P08195 630 aaKnown RBP16.67■□□□□ 0.26
TIMP1-205ENST00000456754 ASNSP08243 561 aa16.67■□□□□ 0.26
TIMP1-205ENST00000456754 PPATQ06203 517 aa16.67■□□□□ 0.26
TIMP1-205ENST00000456754 ZYXQ15942 572 aaKnown RBP16.67■□□□□ 0.26
TIMP1-205ENST00000456754 MFSD6Q6ZSS7 791 aa16.67■□□□□ 0.26
TIMP1-205ENST00000456754 ZNF444Q8N0Y2 327 aaPredicted RBP16.67■□□□□ 0.26
TIMP1-205ENST00000456754 CCDC102AQ96A19 550 aa16.67■□□□□ 0.26
TIMP1-205ENST00000456754 ZKSCAN3Q9BRR0 538 aa16.67■□□□□ 0.26
TIMP1-205ENST00000456754 IL17RBQ9NRM6 502 aa16.67■□□□□ 0.26
TIMP1-205ENST00000456754 MYH4Q9Y623 1939 aa16.66■□□□□ 0.26
TIMP1-205ENST00000456754 IGKV6D-41A0A0C4DH26 115 aa16.66■□□□□ 0.26
TIMP1-205ENST00000456754 UNCXA6NJT0 531 aa16.66■□□□□ 0.26
TIMP1-205ENST00000456754 E7EWF7 191 aa16.66■□□□□ 0.26
TIMP1-205ENST00000456754 MOGSQ13724 837 aa16.66■□□□□ 0.26
TIMP1-205ENST00000456754 KIAA1755Q5JYT7 1200 aa16.66■□□□□ 0.26
TIMP1-205ENST00000456754 TMEM179Q6ZVK1 233 aa16.66■□□□□ 0.26
TIMP1-205ENST00000456754 CYB5R4Q7L1T6 521 aa16.66■□□□□ 0.26
TIMP1-205ENST00000456754 BRI3BPQ8WY22 251 aa16.66■□□□□ 0.26
TIMP1-205ENST00000456754 CEP95Q96GE4 821 aa16.66■□□□□ 0.26
TIMP1-205ENST00000456754 PTPN18Q99952 460 aa16.66■□□□□ 0.26
TIMP1-205ENST00000456754 USP26Q9BXU7 913 aa16.66■□□□□ 0.26
TIMP1-205ENST00000456754 CABP5Q9NP86 173 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms