RNA–Protein interactions for RNA: ENST00000456595.5

TRMU-206, Transcript of tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, humanhuman

TSL 1 (best)

Gene TRMU, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMU-206ENST00000456595 SMC3Q9UQE7 1217 aa23.69■■□□□ 1.38
TRMU-206ENST00000456595 PPP2R3BQ9Y5P8 575 aa23.69■■□□□ 1.38
TRMU-206ENST00000456595 KDM4AO75164 1064 aa23.68■■□□□ 1.38
TRMU-206ENST00000456595 RAB3GAP1Q15042 981 aa23.68■■□□□ 1.38
TRMU-206ENST00000456595 PRAMEF18Q5VWM3 479 aa23.68■■□□□ 1.38
TRMU-206ENST00000456595 ZNF274Q96GC6 653 aaPredicted RBP23.68■■□□□ 1.38
TRMU-206ENST00000456595 TMEM87BQ96K49 555 aa23.68■■□□□ 1.38
TRMU-206ENST00000456595 ZSWIM5Q9P217 1185 aa23.68■■□□□ 1.38
TRMU-206ENST00000456595 EVCP57679 992 aa23.67■■□□□ 1.38
TRMU-206ENST00000456595 ST3GAL1Q11201 340 aa23.67■■□□□ 1.38
TRMU-206ENST00000456595 PFKFB2O60825 505 aa23.67■■□□□ 1.38
TRMU-206ENST00000456595 NKX2-3Q8TAU0 364 aa23.67■■□□□ 1.38
TRMU-206ENST00000456595 GTF3C6Q969F1 213 aa23.67■■□□□ 1.38
TRMU-206ENST00000456595 DHX36Q9H2U1 1008 aaKnown RBP23.67■■□□□ 1.38
TRMU-206ENST00000456595 GPHNQ9NQX3 736 aaPredicted RBP23.67■■□□□ 1.38
TRMU-206ENST00000456595 ANGEL1Q9UNK9 670 aaKnown RBP23.67■■□□□ 1.38
TRMU-206ENST00000456595 ITGBL1O95965 494 aaPredicted RBP23.66■■□□□ 1.38
TRMU-206ENST00000456595 FGRP09769 529 aa23.66■■□□□ 1.38
TRMU-206ENST00000456595 EVX2Q03828 476 aa23.66■■□□□ 1.38
TRMU-206ENST00000456595 C12orf60Q5U649 245 aa23.66■■□□□ 1.38
TRMU-206ENST00000456595 ZSCAN29Q8IWY8 852 aaPredicted RBP23.66■■□□□ 1.38
TRMU-206ENST00000456595 ESR2Q92731 530 aa23.66■■□□□ 1.38
TRMU-206ENST00000456595 NAP1L2Q9ULW6 460 aaPredicted RBP23.66■■□□□ 1.38
TRMU-206ENST00000456595 SIPA1L1O43166 1804 aa23.65■■□□□ 1.38
TRMU-206ENST00000456595 SMIM22K7EJ46 135 aa23.65■■□□□ 1.38
TRMU-206ENST00000456595 TRAF5O00463 557 aa23.65■■□□□ 1.38
TRMU-206ENST00000456595 SH2B2O14492 632 aaPredicted RBP23.65■■□□□ 1.38
TRMU-206ENST00000456595 CYP2D6P10635 497 aa23.65■■□□□ 1.38
TRMU-206ENST00000456595 SLC4A8Q2Y0W8 1093 aa23.65■■□□□ 1.38
TRMU-206ENST00000456595 NBPF12Q5TAG4 269 aaPredicted RBP23.65■■□□□ 1.38
TRMU-206ENST00000456595 RBM46Q8TBY0 533 aaKnown RBP23.65■■□□□ 1.38
TRMU-206ENST00000456595 CHMP4CQ96CF2 233 aa23.65■■□□□ 1.38
TRMU-206ENST00000456595 CSRNP1Q96S65 589 aa23.65■■□□□ 1.38
TRMU-206ENST00000456595 MTA3Q9BTC8 594 aa23.65■■□□□ 1.38
TRMU-206ENST00000456595 PDIA3P30101 505 aaKnown RBP23.64■■□□□ 1.38
TRMU-206ENST00000456595 PLCD1P51178 756 aa23.64■■□□□ 1.38
TRMU-206ENST00000456595 FMR1Q06787 632 aaKnown RBP eCLIP23.64■■□□□ 1.38
TRMU-206ENST00000456595 PDE4BQ07343 736 aa23.64■■□□□ 1.38
TRMU-206ENST00000456595 SART3Q15020 963 aaKnown RBP23.64■■□□□ 1.38
TRMU-206ENST00000456595 IGDCC4Q8TDY8 1250 aa23.64■■□□□ 1.38
TRMU-206ENST00000456595 CDCA5Q96FF9 252 aa23.64■■□□□ 1.38
TRMU-206ENST00000456595 IFIT3O14879 490 aaKnown RBP23.64■■□□□ 1.37
TRMU-206ENST00000456595 POLR3DP05423 398 aaPredicted RBP23.64■■□□□ 1.37
TRMU-206ENST00000456595 TMEM67Q5HYA8 995 aa23.64■■□□□ 1.37
TRMU-206ENST00000456595 SMC1BQ8NDV3 1235 aa23.64■■□□□ 1.37
TRMU-206ENST00000456595 SSC5DA1L4H1 1573 aa23.63■■□□□ 1.37
TRMU-206ENST00000456595 KLF18A0A0U1RQI7 1052 aa23.63■■□□□ 1.37
TRMU-206ENST00000456595 ORC4O43929 436 aa23.63■■□□□ 1.37
TRMU-206ENST00000456595 GJB2P29033 226 aa23.63■■□□□ 1.37
TRMU-206ENST00000456595 SCRN1Q12765 414 aa23.63■■□□□ 1.37
TRMU-206ENST00000456595 NFKBIBQ15653 356 aa23.63■■□□□ 1.37
TRMU-206ENST00000456595 TNPO1Q92973 898 aaKnown RBP23.63■■□□□ 1.37
TRMU-206ENST00000456595 PI4KBQ9UBF8 816 aa23.63■■□□□ 1.37
TRMU-206ENST00000456595 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.63■■□□□ 1.37
TRMU-206ENST00000456595 LAMB1P07942 1786 aa23.62■■□□□ 1.37
TRMU-206ENST00000456595 ERICH2A1L162 156 aa23.62■■□□□ 1.37
TRMU-206ENST00000456595 LIFRP42702 1097 aa23.62■■□□□ 1.37
TRMU-206ENST00000456595 TTC6Q86TZ1 520 aa23.62■■□□□ 1.37
TRMU-206ENST00000456595 BRPF3Q9ULD4 1205 aa23.62■■□□□ 1.37
TRMU-206ENST00000456595 RANBP6O60518 1105 aaKnown RBP23.61■■□□□ 1.37
TRMU-206ENST00000456595 SLURP2P0DP57 97 aa23.61■■□□□ 1.37
TRMU-206ENST00000456595 PKP1Q13835 747 aa23.61■■□□□ 1.37
TRMU-206ENST00000456595 METTL16Q86W50 562 aaKnown RBP23.61■■□□□ 1.37
TRMU-206ENST00000456595 LLPHQ9BRT6 129 aaKnown RBP23.61■■□□□ 1.37
TRMU-206ENST00000456595 UBAC1Q9BSL1 405 aa23.61■■□□□ 1.37
TRMU-206ENST00000456595 LY9Q9HBG7 655 aa23.61■■□□□ 1.37
TRMU-206ENST00000456595 PRDM1O75626 825 aa23.6■■□□□ 1.37
TRMU-206ENST00000456595 HLA-DOAP06340 250 aa23.6■■□□□ 1.37
TRMU-206ENST00000456595 NT5C2P49902 561 aa23.6■■□□□ 1.37
TRMU-206ENST00000456595 SUPT20HL1Q3ZLR7 823 aa23.6■■□□□ 1.37
TRMU-206ENST00000456595 NFXL1Q6ZNB6 911 aa23.6■■□□□ 1.37
TRMU-206ENST00000456595 SGMS1Q86VZ5 419 aa23.6■■□□□ 1.37
TRMU-206ENST00000456595 TMTC2Q8N394 836 aa23.6■■□□□ 1.37
TRMU-206ENST00000456595 GOLGA8BA8MQT2 603 aa23.6■■□□□ 1.37
TRMU-206ENST00000456595 CCT2P78371 535 aaKnown RBP23.6■■□□□ 1.37
TRMU-206ENST00000456595 MAP3K10Q02779 954 aa23.6■■□□□ 1.37
TRMU-206ENST00000456595 EHD4Q9H223 541 aa23.6■■□□□ 1.37
TRMU-206ENST00000456595 DNAJC18Q9H819 358 aa23.6■■□□□ 1.37
TRMU-206ENST00000456595 SERPINB13Q9UIV8 391 aa23.6■■□□□ 1.37
TRMU-206ENST00000456595 ROBO3Q96MS0 1386 aa23.6■■□□□ 1.37
TRMU-206ENST00000456595 GABPAQ06546 454 aa23.59■■□□□ 1.37
TRMU-206ENST00000456595 NBR1Q14596 966 aa23.59■■□□□ 1.37
TRMU-206ENST00000456595 WTAPQ15007 396 aa23.59■■□□□ 1.37
TRMU-206ENST00000456595 MIGA2Q7L4E1 593 aa23.59■■□□□ 1.37
TRMU-206ENST00000456595 ZKSCAN3Q9BRR0 538 aa23.59■■□□□ 1.37
TRMU-206ENST00000456595 PASKQ96RG2 1323 aa23.59■■□□□ 1.37
TRMU-206ENST00000456595 CCDC69A6NI79 296 aa23.58■■□□□ 1.37
TRMU-206ENST00000456595 FSTL1Q12841 308 aa23.58■■□□□ 1.37
TRMU-206ENST00000456595 IQCA1Q86XH1 822 aa23.58■■□□□ 1.37
TRMU-206ENST00000456595 FOXP4Q8IVH2 680 aaPredicted RBP23.58■■□□□ 1.37
TRMU-206ENST00000456595 ZNF287Q9HBT7 754 aa23.58■■□□□ 1.37
TRMU-206ENST00000456595 ZDHHC9Q9Y397 364 aa23.58■■□□□ 1.37
TRMU-206ENST00000456595 TRPM7Q96QT4 1865 aa23.58■■□□□ 1.36
TRMU-206ENST00000456595 FAM196BA6NMK8 535 aa23.57■■□□□ 1.36
TRMU-206ENST00000456595 DHX16O60231 1041 aaKnown RBP23.57■■□□□ 1.36
TRMU-206ENST00000456595 TBC1D12O60347 775 aa23.57■■□□□ 1.36
TRMU-206ENST00000456595 BRD1O95696 1058 aa23.57■■□□□ 1.36
TRMU-206ENST00000456595 HOOK2Q96ED9 719 aa23.57■■□□□ 1.36
TRMU-206ENST00000456595 DYNLL2Q96FJ2 89 aa23.57■■□□□ 1.36
TRMU-206ENST00000456595 MKNK2Q9HBH9 465 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms