RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 MYH13Q9UKX3 1938 aa14.29□□□□□ -0.12
LINC00959-201ENST00000456581 HIBADHP31937 336 aaKnown RBP14.29□□□□□ -0.12
LINC00959-201ENST00000456581 CNBD1Q8NA66 436 aa14.29□□□□□ -0.12
LINC00959-201ENST00000456581 MORC2Q9Y6X9 1032 aaPredicted RBP14.29□□□□□ -0.12
LINC00959-201ENST00000456581 PNPLA7Q6ZV29 1317 aa14.29□□□□□ -0.12
LINC00959-201ENST00000456581 CHD4Q14839 1912 aa14.29□□□□□ -0.12
LINC00959-201ENST00000456581 C4AP0C0L4 1744 aa14.29□□□□□ -0.12
LINC00959-201ENST00000456581 CACNA1SQ13698 1873 aa14.29□□□□□ -0.12
LINC00959-201ENST00000456581 RANBP6O60518 1105 aaKnown RBP14.29□□□□□ -0.12
LINC00959-201ENST00000456581 KIF23Q02241 960 aaPredicted RBP14.29□□□□□ -0.12
LINC00959-201ENST00000456581 MECOMQ03112 1051 aa14.29□□□□□ -0.12
LINC00959-201ENST00000456581 FEZ1Q99689 392 aa14.29□□□□□ -0.12
LINC00959-201ENST00000456581 NACAP1Q9BZK3 213 aa14.29□□□□□ -0.12
LINC00959-201ENST00000456581 AATFQ9NY61 560 aaKnown RBP eCLIP14.29□□□□□ -0.12
LINC00959-201ENST00000456581 MYH2Q9UKX2 1941 aa14.29□□□□□ -0.12
LINC00959-201ENST00000456581 PPARAQ07869 468 aa14.28□□□□□ -0.12
LINC00959-201ENST00000456581 GRIK5Q16478 980 aa14.28□□□□□ -0.12
LINC00959-201ENST00000456581 ANO1Q5XXA6 986 aa14.28□□□□□ -0.12
LINC00959-201ENST00000456581 PRR5LQ6MZQ0 368 aa14.28□□□□□ -0.12
LINC00959-201ENST00000456581 NAT10Q9H0A0 1025 aaKnown RBP14.28□□□□□ -0.12
LINC00959-201ENST00000456581 LY75O60449 1722 aa14.28□□□□□ -0.12
LINC00959-201ENST00000456581 ZBTB43O43298 467 aa14.28□□□□□ -0.12
LINC00959-201ENST00000456581 SYNE3Q6ZMZ3 975 aa14.28□□□□□ -0.12
LINC00959-201ENST00000456581 NSUN4Q96CB9 384 aaKnown RBP14.28□□□□□ -0.12
LINC00959-201ENST00000456581 SEC31AO94979 1220 aaKnown RBP14.28□□□□□ -0.12
LINC00959-201ENST00000456581 GYS1P13807 737 aa14.28□□□□□ -0.12
LINC00959-201ENST00000456581 SFPQP23246 707 aaKnown RBP eCLIP14.28□□□□□ -0.12
LINC00959-201ENST00000456581 GUCY1A2P33402 732 aa14.28□□□□□ -0.12
LINC00959-201ENST00000456581 TERF2Q15554 542 aa14.28□□□□□ -0.12
LINC00959-201ENST00000456581 SHC4Q6S5L8 630 aa14.28□□□□□ -0.12
LINC00959-201ENST00000456581 ZMYM6O95789 1325 aa14.28□□□□□ -0.12
LINC00959-201ENST00000456581 GOLGA8AA7E2F4 631 aa14.27□□□□□ -0.12
LINC00959-201ENST00000456581 DHX16O60231 1041 aaKnown RBP14.27□□□□□ -0.12
LINC00959-201ENST00000456581 FANCCQ00597 558 aa14.27□□□□□ -0.12
LINC00959-201ENST00000456581 HOMER1Q86YM7 354 aa14.27□□□□□ -0.12
LINC00959-201ENST00000456581 PROM2Q8N271 834 aa14.27□□□□□ -0.12
LINC00959-201ENST00000456581 OSBPL5Q9H0X9 879 aaPredicted RBP14.27□□□□□ -0.12
LINC00959-201ENST00000456581 COL24A1Q17RW2 1714 aa14.27□□□□□ -0.13
LINC00959-201ENST00000456581 UTRNP46939 3433 aa14.27□□□□□ -0.13
LINC00959-201ENST00000456581 GRIN1Q05586 938 aa14.27□□□□□ -0.13
LINC00959-201ENST00000456581 NTRK3Q16288 839 aa14.27□□□□□ -0.13
LINC00959-201ENST00000456581 ZCCHC17Q9NP64 241 aaKnown RBP14.27□□□□□ -0.13
LINC00959-201ENST00000456581 POLR3EQ9NVU0 708 aa14.27□□□□□ -0.13
LINC00959-201ENST00000456581 DNAI1Q9UI46 699 aa14.27□□□□□ -0.13
LINC00959-201ENST00000456581 SLC12A7Q9Y666 1083 aa14.27□□□□□ -0.13
LINC00959-201ENST00000456581 WDR19Q8NEZ3 1342 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 A0A1W2PQ27 194 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 A0A1W2PQ64 194 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 A0A1W2PQD8 194 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 NEMFO60524 1076 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 KIF20AO95235 890 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 SLU7O95391 586 aaKnown RBP14.26□□□□□ -0.13
LINC00959-201ENST00000456581 CYP2D6P10635 497 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 ZNF827Q17R98 1081 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 FOXP4Q8IVH2 680 aaPredicted RBP14.26□□□□□ -0.13
LINC00959-201ENST00000456581 ZNF397Q8NF99 534 aaPredicted RBP14.26□□□□□ -0.13
LINC00959-201ENST00000456581 KCNG4Q8TDN1 519 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 NUP133Q8WUM0 1156 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 STAG1Q8WVM7 1258 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 TMEM87BQ96K49 555 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 ALG1Q9BT22 464 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 USP17L12C9JPN9 530 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 USP17L21D6R901 530 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 GNAT2P19087 354 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 NLRP12P59046 1061 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 PDE4BQ07343 736 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 GRAMD1CQ8IYS0 662 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 CHMP4CQ96CF2 233 aa14.26□□□□□ -0.13
LINC00959-201ENST00000456581 A0A0U1RQJ8 604 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 SYKP43405 635 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 CLCN6P51797 869 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 SYCP1Q15431 976 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 LONRF3Q496Y0 759 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 ATRIPQ8WXE1 791 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 SLC26A6Q9BXS9 759 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 hCG_1642624A0A1W2PR95 340 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 NMT2O60551 498 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 SERPINC1P01008 464 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 ATP2B1P20020 1258 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 DIXDC1Q155Q3 683 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 CFAP100Q494V2 611 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 KRT27Q7Z3Y8 459 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 SGMS1Q86VZ5 419 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 ERO1AQ96HE7 468 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 ANKRD2Q9GZV1 360 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 FANCLQ9NW38 375 aa14.25□□□□□ -0.13
LINC00959-201ENST00000456581 SERPINB2P05120 415 aa14.24□□□□□ -0.13
LINC00959-201ENST00000456581 BMP6P22004 513 aa14.24□□□□□ -0.13
LINC00959-201ENST00000456581 DDR1Q08345 913 aa14.24□□□□□ -0.13
LINC00959-201ENST00000456581 GRAPQ13588 217 aa14.24□□□□□ -0.13
LINC00959-201ENST00000456581 GNL2Q13823 731 aaKnown RBP14.24□□□□□ -0.13
LINC00959-201ENST00000456581 WTAPQ15007 396 aa14.24□□□□□ -0.13
LINC00959-201ENST00000456581 KRT40Q6A162 431 aa14.24□□□□□ -0.13
LINC00959-201ENST00000456581 TRMT44Q8IYL2 757 aaKnown RBP14.24□□□□□ -0.13
LINC00959-201ENST00000456581 GRAPLQ8TC17 118 aaPredicted RBP14.24□□□□□ -0.13
LINC00959-201ENST00000456581 KRT23Q9C075 422 aa14.24□□□□□ -0.13
LINC00959-201ENST00000456581 IRS2Q9Y4H2 1338 aa14.24□□□□□ -0.13
LINC00959-201ENST00000456581 YEATS4O95619 227 aa14.24□□□□□ -0.13
LINC00959-201ENST00000456581 TFRCP02786 760 aaKnown RBP14.24□□□□□ -0.13
LINC00959-201ENST00000456581 GSDMDP57764 484 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms