RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CYP2D7A0A087X1C5 515 aa21.14■□□□□ 0.98
SEMA3B-209ENST00000456560 PCP11498 1178 aaKnown RBP21.14■□□□□ 0.98
SEMA3B-209ENST00000456560 PTPREP23469 700 aa21.14■□□□□ 0.98
SEMA3B-209ENST00000456560 CCZ1BP86790 482 aa21.14■□□□□ 0.98
SEMA3B-209ENST00000456560 CCZ1P86791 482 aaPredicted RBP21.14■□□□□ 0.98
SEMA3B-209ENST00000456560 FUT2Q10981 343 aa21.14■□□□□ 0.98
SEMA3B-209ENST00000456560 PNOCQ13519 176 aa21.14■□□□□ 0.98
SEMA3B-209ENST00000456560 CTR9Q6PD62 1173 aa21.14■□□□□ 0.98
SEMA3B-209ENST00000456560 NSUN4Q96CB9 384 aaKnown RBP21.14■□□□□ 0.98
SEMA3B-209ENST00000456560 IMPACTQ9P2X3 320 aa21.14■□□□□ 0.98
SEMA3B-209ENST00000456560 BAZ2AQ9UIF9 1905 aaKnown RBP21.14■□□□□ 0.98
SEMA3B-209ENST00000456560 MYH2Q9UKX2 1941 aa21.14■□□□□ 0.97
SEMA3B-209ENST00000456560 RIOK3O14730 519 aaKnown RBP21.14■□□□□ 0.97
SEMA3B-209ENST00000456560 PPP4R3BQ5MIZ7 849 aa21.14■□□□□ 0.97
SEMA3B-209ENST00000456560 FILIP1Q7Z7B0 1213 aa21.14■□□□□ 0.97
SEMA3B-209ENST00000456560 SHISA4Q96DD7 197 aa21.14■□□□□ 0.97
SEMA3B-209ENST00000456560 NLRP3Q96P20 1036 aa21.14■□□□□ 0.97
SEMA3B-209ENST00000456560 SRP68Q9UHB9 627 aaKnown RBP21.14■□□□□ 0.97
SEMA3B-209ENST00000456560 TPM4P67936 248 aa21.13■□□□□ 0.97
SEMA3B-209ENST00000456560 NR5A1Q13285 461 aa21.13■□□□□ 0.97
SEMA3B-209ENST00000456560 OXER1Q8TDS5 423 aa21.13■□□□□ 0.97
SEMA3B-209ENST00000456560 SETDB2Q96T68 719 aa21.13■□□□□ 0.97
SEMA3B-209ENST00000456560 XPO4Q9C0E2 1151 aaKnown RBP21.13■□□□□ 0.97
SEMA3B-209ENST00000456560 HSD3B7Q9H2F3 369 aa21.13■□□□□ 0.97
SEMA3B-209ENST00000456560 DLEC1Q9Y238 1755 aa21.13■□□□□ 0.97
SEMA3B-209ENST00000456560 GSDMDP57764 484 aa21.13■□□□□ 0.97
SEMA3B-209ENST00000456560 MDM2Q00987 491 aaPredicted RBP21.13■□□□□ 0.97
SEMA3B-209ENST00000456560 PKN1Q16512 942 aa21.13■□□□□ 0.97
SEMA3B-209ENST00000456560 ISM2Q6H9L7 571 aa21.13■□□□□ 0.97
SEMA3B-209ENST00000456560 FOXP4Q8IVH2 680 aaPredicted RBP21.13■□□□□ 0.97
SEMA3B-209ENST00000456560 ANKRD2Q9GZV1 360 aa21.13■□□□□ 0.97
SEMA3B-209ENST00000456560 IFNKQ9P0W0 207 aa21.13■□□□□ 0.97
SEMA3B-209ENST00000456560 PRPF3O43395 683 aaKnown RBP21.12■□□□□ 0.97
SEMA3B-209ENST00000456560 SKILP12757 684 aa21.12■□□□□ 0.97
SEMA3B-209ENST00000456560 MECOMQ03112 1051 aa21.12■□□□□ 0.97
SEMA3B-209ENST00000456560 KRT27Q7Z3Y8 459 aa21.12■□□□□ 0.97
SEMA3B-209ENST00000456560 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.12■□□□□ 0.97
SEMA3B-209ENST00000456560 MYH6P13533 1939 aa21.12■□□□□ 0.97
SEMA3B-209ENST00000456560 BRWD3Q6RI45 1802 aa21.12■□□□□ 0.97
SEMA3B-209ENST00000456560 ZBTB22O15209 634 aa21.12■□□□□ 0.97
SEMA3B-209ENST00000456560 CBX1P83916 185 aa21.12■□□□□ 0.97
SEMA3B-209ENST00000456560 POTEAQ6S8J7 498 aa21.12■□□□□ 0.97
SEMA3B-209ENST00000456560 NBPF5PQ86XG9 351 aaPredicted RBP21.12■□□□□ 0.97
SEMA3B-209ENST00000456560 ZNF579Q8NAF0 562 aaKnown RBP21.12■□□□□ 0.97
SEMA3B-209ENST00000456560 CNNM3Q8NE01 707 aa21.12■□□□□ 0.97
SEMA3B-209ENST00000456560 PCDHB6Q9Y5E3 794 aa21.12■□□□□ 0.97
SEMA3B-209ENST00000456560 HIBADHP31937 336 aaKnown RBP21.11■□□□□ 0.97
SEMA3B-209ENST00000456560 GRIN1Q05586 938 aa21.11■□□□□ 0.97
SEMA3B-209ENST00000456560 C16orf45Q96MC5 204 aaPredicted RBP21.11■□□□□ 0.97
SEMA3B-209ENST00000456560 KCND1Q9NSA2 647 aa21.11■□□□□ 0.97
SEMA3B-209ENST00000456560 MORC2Q9Y6X9 1032 aaPredicted RBP21.11■□□□□ 0.97
SEMA3B-209ENST00000456560 USP17L12C9JPN9 530 aa21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 USP17L21D6R901 530 aa21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 TM4SF1P30408 202 aa21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 TROAPQ12815 778 aa21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 IFIT1BQ5T764 474 aaKnown RBP21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 CATIPQ7Z7H3 387 aa21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 PDCL2Q8N4E4 241 aa21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 PCDHA5Q9Y5H7 936 aa21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 SRPRBQ9Y5M8 271 aaKnown RBP21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 ORC4O43929 436 aa21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 PRDM1O75626 825 aa21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 SMC2O95347 1197 aa21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 TNNT1P13805 278 aa21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 RXRBP28702 533 aa21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 TPD52L1Q16890 204 aaPredicted RBP21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 PHF20Q9BVI0 1012 aa21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 RBM28Q9NW13 759 aaKnown RBP21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 TFCP2L1Q9NZI6 479 aa21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 IRS2Q9Y4H2 1338 aa21.1■□□□□ 0.97
SEMA3B-209ENST00000456560 MYH13Q9UKX3 1938 aa21.09■□□□□ 0.97
SEMA3B-209ENST00000456560 FANCCQ00597 558 aa21.09■□□□□ 0.97
SEMA3B-209ENST00000456560 SPECC1Q5M775 1068 aa21.09■□□□□ 0.97
SEMA3B-209ENST00000456560 IQCA1Q86XH1 822 aa21.09■□□□□ 0.97
SEMA3B-209ENST00000456560 ZPR1O75312 459 aa21.09■□□□□ 0.97
SEMA3B-209ENST00000456560 CALM1P0DP23 149 aa21.09■□□□□ 0.97
SEMA3B-209ENST00000456560 CALM2P0DP24 149 aa21.09■□□□□ 0.97
SEMA3B-209ENST00000456560 CALM3P0DP25 149 aa21.09■□□□□ 0.97
SEMA3B-209ENST00000456560 AKAP17AQ02040 695 aaKnown RBP21.09■□□□□ 0.97
SEMA3B-209ENST00000456560 TPTE2Q6XPS3 522 aa21.09■□□□□ 0.97
SEMA3B-209ENST00000456560 CABP5Q9NP86 173 aa21.09■□□□□ 0.97
SEMA3B-209ENST00000456560 CEP131Q9UPN4 1083 aa21.09■□□□□ 0.97
SEMA3B-209ENST00000456560 BTAF1O14981 1849 aa21.09■□□□□ 0.97
SEMA3B-209ENST00000456560 FOXN1O15353 648 aa21.08■□□□□ 0.97
SEMA3B-209ENST00000456560 CTIFO43310 598 aaKnown RBP21.08■□□□□ 0.97
SEMA3B-209ENST00000456560 DDAH1O94760 285 aa21.08■□□□□ 0.97
SEMA3B-209ENST00000456560 PLEKHA8P1O95397 391 aa21.08■□□□□ 0.97
SEMA3B-209ENST00000456560 LMOD1P29536 600 aaPredicted RBP21.08■□□□□ 0.97
SEMA3B-209ENST00000456560 MYL5Q02045 173 aa21.08■□□□□ 0.97
SEMA3B-209ENST00000456560 DMTNQ08495 405 aa21.08■□□□□ 0.97
SEMA3B-209ENST00000456560 TMED8Q6PL24 325 aaPredicted RBP21.08■□□□□ 0.97
SEMA3B-209ENST00000456560 CRNKL1Q9BZJ0 848 aaKnown RBP21.08■□□□□ 0.97
SEMA3B-209ENST00000456560 DCP1AQ9NPI6 582 aaPredicted RBP21.08■□□□□ 0.97
SEMA3B-209ENST00000456560 USP27XA6NNY8 438 aa21.08■□□□□ 0.96
SEMA3B-209ENST00000456560 GNPATO15228 680 aa21.08■□□□□ 0.96
SEMA3B-209ENST00000456560 BMP6P22004 513 aa21.08■□□□□ 0.96
SEMA3B-209ENST00000456560 TMC6Q7Z403 805 aa21.08■□□□□ 0.96
SEMA3B-209ENST00000456560 VPS54Q9P1Q0 977 aa21.08■□□□□ 0.96
SEMA3B-209ENST00000456560 ATP1A3P13637 1013 aa21.07■□□□□ 0.96
SEMA3B-209ENST00000456560 ZSCAN20P17040 1043 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms