RNA–Protein interactions for RNA: ENST00000456518.3

SCMH1-211, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 2 BASIC

Gene SCMH1, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-211ENST00000456518 ZKSCAN4Q969J2 545 aaPredicted RBP11.3□□□□□ -0.6
SCMH1-211ENST00000456518 WRNIP1Q96S55 665 aa11.3□□□□□ -0.6
SCMH1-211ENST00000456518 GBA2Q9HCG7 927 aaPredicted RBP11.3□□□□□ -0.6
SCMH1-211ENST00000456518 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.3□□□□□ -0.6
SCMH1-211ENST00000456518 ORC4O43929 436 aa11.29□□□□□ -0.6
SCMH1-211ENST00000456518 RANBP6O60518 1105 aaKnown RBP11.29□□□□□ -0.6
SCMH1-211ENST00000456518 CAP2P40123 477 aa11.29□□□□□ -0.6
SCMH1-211ENST00000456518 MAP3K9P80192 1104 aa11.29□□□□□ -0.6
SCMH1-211ENST00000456518 TSGA10IPQ3SY00 556 aa11.29□□□□□ -0.6
SCMH1-211ENST00000456518 RNF20Q5VTR2 975 aa11.29□□□□□ -0.6
SCMH1-211ENST00000456518 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.29□□□□□ -0.6
SCMH1-211ENST00000456518 ARMC9Q7Z3E5 817 aa11.29□□□□□ -0.6
SCMH1-211ENST00000456518 ZNF444Q8N0Y2 327 aaPredicted RBP11.29□□□□□ -0.6
SCMH1-211ENST00000456518 C2orf69Q8N8R5 385 aa11.29□□□□□ -0.6
SCMH1-211ENST00000456518 RNF41Q9H4P4 317 aaPredicted RBP11.29□□□□□ -0.6
SCMH1-211ENST00000456518 LAMB1P07942 1786 aa11.29□□□□□ -0.6
SCMH1-211ENST00000456518 MPHOSPH10O00566 681 aaKnown RBP11.28□□□□□ -0.6
SCMH1-211ENST00000456518 CTNND1O60716 968 aaKnown RBP11.28□□□□□ -0.6
SCMH1-211ENST00000456518 GH2P01242 217 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 MCCP23508 829 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 GUCY1A2P33402 732 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 IREB2P48200 963 aaKnown RBP11.28□□□□□ -0.6
SCMH1-211ENST00000456518 TFAP4Q01664 338 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 MAP3K11Q16584 847 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 LDLRAD1Q5T700 205 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 CYB5R4Q7L1T6 521 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 CCDC84Q86UT8 332 aaPredicted RBP11.28□□□□□ -0.6
SCMH1-211ENST00000456518 CLMNQ96JQ2 1002 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
SCMH1-211ENST00000456518 C22orf23Q9BZE7 217 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 LAMA4Q16363 1823 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 NMT2O60551 498 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 KDM4AO75164 1064 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 CPA1P15085 419 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 ZKSCAN1P17029 563 aaPredicted RBP11.28□□□□□ -0.6
SCMH1-211ENST00000456518 VGLL4Q14135 290 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 ABCB5Q2M3G0 1257 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 CHST3Q7LGC8 479 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 CLEC10AQ8IUN9 316 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 MB21D2Q8IYB1 491 aaPredicted RBP11.28□□□□□ -0.6
SCMH1-211ENST00000456518 NCOA7Q8NI08 942 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 ZNF287Q9HBT7 754 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 ZSWIM5Q9P217 1185 aa11.28□□□□□ -0.6
SCMH1-211ENST00000456518 TSPY2A6NKD2 308 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 PCP11498 1178 aaKnown RBP11.27□□□□□ -0.61
SCMH1-211ENST00000456518 ANTXR2P58335 489 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 FKBP1BP68106 108 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 SEPT2Q15019 361 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 SCYL3Q8IZE3 742 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 NEDD1Q8NHV4 660 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 CNKSR2Q8WXI2 1034 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 ESR2Q92731 530 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 CCDC17Q96LX7 622 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 JAKMIP1Q96N16 626 aaKnown RBP11.27□□□□□ -0.61
SCMH1-211ENST00000456518 NEK1Q96PY6 1258 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 KIF2CQ99661 725 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 ZKSCAN3Q9BRR0 538 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 KRT23Q9C075 422 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 CNNM2Q9H8M5 875 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 ELP3Q9H9T3 547 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 IL17RBQ9NRM6 502 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 TAOK2Q9UL54 1235 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 ZBTB21Q9ULJ3 1066 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 SNCAIPQ9Y6H5 919 aa11.27□□□□□ -0.61
SCMH1-211ENST00000456518 IGKV6D-41A0A0C4DH26 115 aa11.26□□□□□ -0.61
SCMH1-211ENST00000456518 TMEM88BA6NKF7 163 aa11.26□□□□□ -0.61
SCMH1-211ENST00000456518 TSPY3P0CV98 308 aa11.26□□□□□ -0.61
SCMH1-211ENST00000456518 TSPY8P0CW00 308 aa11.26□□□□□ -0.61
SCMH1-211ENST00000456518 RBM25P49756 843 aaKnown RBP11.26□□□□□ -0.61
SCMH1-211ENST00000456518 HUNKP57058 714 aa11.26□□□□□ -0.61
SCMH1-211ENST00000456518 TRDNQ13061 729 aa11.26□□□□□ -0.61
SCMH1-211ENST00000456518 KRT32Q14532 448 aa11.26□□□□□ -0.61
SCMH1-211ENST00000456518 NOL9Q5SY16 702 aaKnown RBP11.26□□□□□ -0.61
SCMH1-211ENST00000456518 SIAH1Q8IUQ4 282 aa11.26□□□□□ -0.61
SCMH1-211ENST00000456518 ANKRD13AQ8IZ07 590 aa11.26□□□□□ -0.61
SCMH1-211ENST00000456518 TCEANC2Q96MN5 208 aa11.26□□□□□ -0.61
SCMH1-211ENST00000456518 TBC1D32Q96NH3 1257 aa11.26□□□□□ -0.61
SCMH1-211ENST00000456518 UPF2Q9HAU5 1272 aaKnown RBP11.26□□□□□ -0.61
SCMH1-211ENST00000456518 CABP5Q9NP86 173 aa11.26□□□□□ -0.61
SCMH1-211ENST00000456518 CREBZFQ9NS37 354 aa11.26□□□□□ -0.61
SCMH1-211ENST00000456518 TRPM7Q96QT4 1865 aa11.26□□□□□ -0.61
SCMH1-211ENST00000456518 PTPRAP18433 802 aa11.25□□□□□ -0.61
SCMH1-211ENST00000456518 ANAPC15P60006 121 aa11.25□□□□□ -0.61
SCMH1-211ENST00000456518 RAB3GAP1Q15042 981 aa11.25□□□□□ -0.61
SCMH1-211ENST00000456518 TMEM179Q6ZVK1 233 aa11.25□□□□□ -0.61
SCMH1-211ENST00000456518 RALYLQ86SE5 291 aaKnown RBP11.25□□□□□ -0.61
SCMH1-211ENST00000456518 SAPCD2Q86UD0 394 aa11.25□□□□□ -0.61
SCMH1-211ENST00000456518 JMYQ8N9B5 988 aa11.25□□□□□ -0.61
SCMH1-211ENST00000456518 SLC10A4Q96EP9 437 aa11.25□□□□□ -0.61
SCMH1-211ENST00000456518 LRRC2Q9BYS8 371 aa11.25□□□□□ -0.61
SCMH1-211ENST00000456518 GPHNQ9NQX3 736 aaPredicted RBP11.25□□□□□ -0.61
SCMH1-211ENST00000456518 CSADQ9Y600 493 aa11.25□□□□□ -0.61
SCMH1-211ENST00000456518 TLL2Q9Y6L7 1015 aa11.25□□□□□ -0.61
SCMH1-211ENST00000456518 PAPPA2Q9BXP8 1791 aa11.25□□□□□ -0.61
SCMH1-211ENST00000456518 ASNSP08243 561 aa11.24□□□□□ -0.61
SCMH1-211ENST00000456518 CASTP20810 708 aaKnown RBP11.24□□□□□ -0.61
SCMH1-211ENST00000456518 GJA5P36382 358 aa11.24□□□□□ -0.61
SCMH1-211ENST00000456518 EXOSC10Q01780 885 aaKnown RBP11.24□□□□□ -0.61
SCMH1-211ENST00000456518 ACER1Q8TDN7 264 aa11.24□□□□□ -0.61
SCMH1-211ENST00000456518 IL17RAQ96F46 866 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms