RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 LUZP1Q86V48 1076 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 MICALL1Q8N3F8 863 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 SPATA5Q8NB90 893 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 APPBP2Q92624 585 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 MRFAP1L1Q96HT8 127 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 LARP6Q9BRS8 491 aaKnown RBP8.72□□□□□ -1.01
HDAC9-218ENST00000456174 MINPP1Q9UNW1 487 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 RPS6KL1Q9Y6S9 549 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 PHLPP2Q6ZVD8 1323 aa8.72□□□□□ -1.01
HDAC9-218ENST00000456174 PSDA5PKW4 1024 aaPredicted RBP8.71□□□□□ -1.01
HDAC9-218ENST00000456174 COQ9O75208 318 aa8.71□□□□□ -1.01
HDAC9-218ENST00000456174 IDH1O75874 414 aaKnown RBP8.71□□□□□ -1.01
HDAC9-218ENST00000456174 CYP21A2P08686 494 aa8.71□□□□□ -1.01
HDAC9-218ENST00000456174 RPS8P62241 208 aaKnown RBP8.71□□□□□ -1.01
HDAC9-218ENST00000456174 ICA1Q05084 483 aa8.71□□□□□ -1.01
HDAC9-218ENST00000456174 TBC1D8BQ0IIM8 1120 aa8.71□□□□□ -1.01
HDAC9-218ENST00000456174 MTA1Q13330 715 aa8.71□□□□□ -1.01
HDAC9-218ENST00000456174 RASGRF1Q13972 1273 aa8.71□□□□□ -1.01
HDAC9-218ENST00000456174 SLC9C2Q5TAH2 1124 aa8.71□□□□□ -1.01
HDAC9-218ENST00000456174 TTLL5Q6EMB2 1281 aa8.71□□□□□ -1.01
HDAC9-218ENST00000456174 PSMD1Q99460 953 aa8.71□□□□□ -1.01
HDAC9-218ENST00000456174 NUCKS1Q9H1E3 243 aaKnown RBP8.71□□□□□ -1.01
HDAC9-218ENST00000456174 ARFGAP3Q9NP61 516 aa8.71□□□□□ -1.01
HDAC9-218ENST00000456174 MYH13Q9UKX3 1938 aa8.71□□□□□ -1.02
HDAC9-218ENST00000456174 ABCB7O75027 752 aa8.71□□□□□ -1.02
HDAC9-218ENST00000456174 NEBLO76041 1014 aa8.71□□□□□ -1.02
HDAC9-218ENST00000456174 NEFHP12036 1026 aa8.71□□□□□ -1.02
HDAC9-218ENST00000456174 GYS1P13807 737 aa8.71□□□□□ -1.02
HDAC9-218ENST00000456174 RPS6KB1P23443 525 aa8.71□□□□□ -1.02
HDAC9-218ENST00000456174 HMGB2P26583 209 aaKnown RBP8.71□□□□□ -1.02
HDAC9-218ENST00000456174 ADD2P35612 726 aa8.71□□□□□ -1.02
HDAC9-218ENST00000456174 COL9A3Q14050 684 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-218ENST00000456174 UBE4AQ14139 1066 aa8.71□□□□□ -1.02
HDAC9-218ENST00000456174 GPR161Q8N6U8 529 aaKnown RBP8.71□□□□□ -1.02
HDAC9-218ENST00000456174 CNBD1Q8NA66 436 aa8.71□□□□□ -1.02
HDAC9-218ENST00000456174 PUS7LQ9H0K6 701 aaKnown RBP8.71□□□□□ -1.02
HDAC9-218ENST00000456174 VEZTQ9HBM0 779 aa8.71□□□□□ -1.02
HDAC9-218ENST00000456174 TM4SF1P30408 202 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 MRPL12P52815 198 aaKnown RBP8.7□□□□□ -1.02
HDAC9-218ENST00000456174 MAP3K11Q16584 847 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 CPLX2Q6PUV4 134 aaKnown RBP8.7□□□□□ -1.02
HDAC9-218ENST00000456174 RBM43Q6ZSC3 357 aaKnown RBP8.7□□□□□ -1.02
HDAC9-218ENST00000456174 ERCC4Q92889 916 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-218ENST00000456174 CCDC34Q96HJ3 373 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 ZSCAN31Q96LW9 406 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-218ENST00000456174 NEK1Q96PY6 1258 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 PAIP2Q9BPZ3 127 aaKnown RBP8.7□□□□□ -1.02
HDAC9-218ENST00000456174 ALDH8A1Q9H2A2 487 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-218ENST00000456174 CCDC69A6NI79 296 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 WTIPA6NIX2 430 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-218ENST00000456174 GPAA1O43292 621 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 RTN2O75298 545 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 CAVIN2O95810 425 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 ZSCAN22P10073 491 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-218ENST00000456174 PDE6AP16499 860 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 RXRBP28702 533 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 UBE3CQ15386 1083 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 PREPLQ4J6C6 727 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-218ENST00000456174 AP1ARQ63HQ0 302 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 ANKRD23Q86SG2 305 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 TCEANC2Q96MN5 208 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 SH3GL3Q99963 347 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 WWC3Q9ULE0 1092 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 ZNF532Q9HCE3 1301 aa8.7□□□□□ -1.02
HDAC9-218ENST00000456174 PLSCR1O15162 318 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 MAFGO15525 162 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 LARGE1O95461 756 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 APBA3O96018 575 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 PAX7P23759 505 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 GYG1P46976 350 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 APOBRQ0VD83 1088 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 MAP3K12Q12852 859 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 TRAF1Q13077 416 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 ANKRD1Q15327 319 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 PRR5LQ6MZQ0 368 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 HS6ST3Q8IZP7 471 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 ZNF513Q8N8E2 541 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-218ENST00000456174 PPP1R13BQ96KQ4 1090 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 TRIM6Q9C030 488 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-218ENST00000456174 SH2B1Q9NRF2 756 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-218ENST00000456174 TRMT1Q9NXH9 659 aaKnown RBP8.69□□□□□ -1.02
HDAC9-218ENST00000456174 DNAI1Q9UI46 699 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 ATP6V1DQ9Y5K8 247 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 A0A0G2JLW4 131 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 TCRBV5S4A2TA0A5A2 114 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 FOXP2O15409 715 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 RWDD2BP57060 319 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 SCRN1Q12765 414 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 ME3Q16798 604 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 CAVIN4Q5BKX8 364 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 STOX1Q6ZVD7 989 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 POTEDQ86YR6 584 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 PRPF38AQ8NAV1 312 aaKnown RBP8.69□□□□□ -1.02
HDAC9-218ENST00000456174 CCDC26Q8TAB7 109 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 DDX11Q96FC9 970 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 ANKRD2Q9GZV1 360 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 VPS18Q9P253 973 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 TPCN1Q9ULQ1 816 aa8.69□□□□□ -1.02
HDAC9-218ENST00000456174 IQSEC3Q9UPP2 1182 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-218ENST00000456174 ZNF804BA4D1E1 1349 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms