RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 ALPK3Q96L96 1907 aa15.74■□□□□ 0.11
TREX1-203ENST00000456089 SLAIN1Q8ND83 568 aa15.74■□□□□ 0.11
TREX1-203ENST00000456089 PNMA3Q9UL41 463 aa15.74■□□□□ 0.11
TREX1-203ENST00000456089 MYH7P12883 1935 aa15.74■□□□□ 0.11
TREX1-203ENST00000456089 BAZ2AQ9UIF9 1905 aaKnown RBP15.74■□□□□ 0.11
TREX1-203ENST00000456089 INHAP05111 366 aa15.73■□□□□ 0.11
TREX1-203ENST00000456089 USP5P45974 858 aa15.73■□□□□ 0.11
TREX1-203ENST00000456089 UBXN2AP68543 259 aa15.73■□□□□ 0.11
TREX1-203ENST00000456089 SH3D19Q5HYK7 790 aa15.73■□□□□ 0.11
TREX1-203ENST00000456089 HABP4Q5JVS0 413 aaKnown RBP15.73■□□□□ 0.11
TREX1-203ENST00000456089 RHPN1Q8TCX5 695 aa15.73■□□□□ 0.11
TREX1-203ENST00000456089 AS3MTQ9HBK9 375 aa15.73■□□□□ 0.11
TREX1-203ENST00000456089 ZBTB21Q9ULJ3 1066 aa15.73■□□□□ 0.11
TREX1-203ENST00000456089 H0YGN5 161 aa15.72■□□□□ 0.11
TREX1-203ENST00000456089 HLA-DOAP06340 250 aa15.72■□□□□ 0.11
TREX1-203ENST00000456089 GJB1P08034 283 aa15.72■□□□□ 0.11
TREX1-203ENST00000456089 ASNSP08243 561 aa15.72■□□□□ 0.11
TREX1-203ENST00000456089 GJA8P48165 433 aa15.72■□□□□ 0.11
TREX1-203ENST00000456089 BACE1P56817 501 aa15.72■□□□□ 0.11
TREX1-203ENST00000456089 EVX2Q03828 476 aa15.72■□□□□ 0.11
TREX1-203ENST00000456089 FAM110CQ1W6H9 321 aa15.72■□□□□ 0.11
TREX1-203ENST00000456089 METTL16Q86W50 562 aaKnown RBP15.72■□□□□ 0.11
TREX1-203ENST00000456089 FOXP4Q8IVH2 680 aaPredicted RBP15.72■□□□□ 0.11
TREX1-203ENST00000456089 SIRT2Q8IXJ6 389 aa15.72■□□□□ 0.11
TREX1-203ENST00000456089 CLASRPQ8N2M8 674 aaKnown RBP15.72■□□□□ 0.11
TREX1-203ENST00000456089 COA7Q96BR5 231 aa15.72■□□□□ 0.11
TREX1-203ENST00000456089 KIF1BPQ96EK5 621 aa15.72■□□□□ 0.11
TREX1-203ENST00000456089 WDR18Q9BV38 432 aa15.72■□□□□ 0.11
TREX1-203ENST00000456089 RAB11FIP3O75154 756 aa15.71■□□□□ 0.11
TREX1-203ENST00000456089 GH2P01242 217 aa15.71■□□□□ 0.11
TREX1-203ENST00000456089 PABPC4Q13310 644 aaKnown RBP eCLIP15.71■□□□□ 0.11
TREX1-203ENST00000456089 ZYXQ15942 572 aaKnown RBP15.71■□□□□ 0.11
TREX1-203ENST00000456089 U2AF1L4Q8WU68 220 aaKnown RBP15.71■□□□□ 0.11
TREX1-203ENST00000456089 GCC1Q96CN9 775 aa15.71■□□□□ 0.11
TREX1-203ENST00000456089 EDC3Q96F86 508 aaKnown RBP15.71■□□□□ 0.11
TREX1-203ENST00000456089 P2RX7Q99572 595 aaKnown RBP15.71■□□□□ 0.11
TREX1-203ENST00000456089 TBC1D2Q9BYX2 928 aa15.71■□□□□ 0.11
TREX1-203ENST00000456089 TMOD4Q9NZQ9 345 aa15.71■□□□□ 0.11
TREX1-203ENST00000456089 COLQQ9Y215 455 aaPredicted RBP15.71■□□□□ 0.11
TREX1-203ENST00000456089 IFIT2P09913 472 aaKnown RBP15.7■□□□□ 0.1
TREX1-203ENST00000456089 GCLCP48506 637 aaPredicted RBP15.7■□□□□ 0.1
TREX1-203ENST00000456089 RRP1P56182 461 aaKnown RBP15.7■□□□□ 0.1
TREX1-203ENST00000456089 IRX3P78415 501 aaPredicted RBP15.7■□□□□ 0.1
TREX1-203ENST00000456089 MAP3K12Q12852 859 aa15.7■□□□□ 0.1
TREX1-203ENST00000456089 TRIM32Q13049 653 aa15.7■□□□□ 0.1
TREX1-203ENST00000456089 SLFNL1Q499Z3 407 aa15.7■□□□□ 0.1
TREX1-203ENST00000456089 DPF3Q92784 378 aa15.7■□□□□ 0.1
TREX1-203ENST00000456089 DEFB118Q96PH6 123 aa15.7■□□□□ 0.1
TREX1-203ENST00000456089 DNAJC2Q99543 621 aaKnown RBP15.7■□□□□ 0.1
TREX1-203ENST00000456089 TXNRD2Q9NNW7 524 aa15.7■□□□□ 0.1
TREX1-203ENST00000456089 USP17L10C9JJH3 530 aa15.69■□□□□ 0.1
TREX1-203ENST00000456089 GOLIM4O00461 696 aa15.69■□□□□ 0.1
TREX1-203ENST00000456089 IRF5Q13568 498 aa15.69■□□□□ 0.1
TREX1-203ENST00000456089 UBE2Q1Q7Z7E8 422 aa15.69■□□□□ 0.1
TREX1-203ENST00000456089 NKX2-3Q8TAU0 364 aa15.69■□□□□ 0.1
TREX1-203ENST00000456089 RIOK1Q9BRS2 568 aaKnown RBP15.69■□□□□ 0.1
TREX1-203ENST00000456089 EMILIN3Q9NT22 766 aa15.69■□□□□ 0.1
TREX1-203ENST00000456089 FARP2O94887 1054 aaPredicted RBP15.68■□□□□ 0.1
TREX1-203ENST00000456089 SGPL1O95470 568 aa15.68■□□□□ 0.1
TREX1-203ENST00000456089 PDE6AP16499 860 aa15.68■□□□□ 0.1
TREX1-203ENST00000456089 PLCD1P51178 756 aa15.68■□□□□ 0.1
TREX1-203ENST00000456089 HERVK_113P62684 666 aa15.68■□□□□ 0.1
TREX1-203ENST00000456089 RAB3GAP1Q15042 981 aa15.68■□□□□ 0.1
TREX1-203ENST00000456089 POTEEQ6S8J3 1075 aa15.68■□□□□ 0.1
TREX1-203ENST00000456089 PXYLP1Q8TE99 480 aa15.68■□□□□ 0.1
TREX1-203ENST00000456089 PAGR1Q9BTK6 254 aa15.68■□□□□ 0.1
TREX1-203ENST00000456089 GJD2Q9UKL4 321 aa15.68■□□□□ 0.1
TREX1-203ENST00000456089 MAGEB6P1A0A0J9YX57 407 aa15.67■□□□□ 0.1
TREX1-203ENST00000456089 TFRCP02786 760 aaKnown RBP15.67■□□□□ 0.1
TREX1-203ENST00000456089 CHGBP05060 677 aa15.67■□□□□ 0.1
TREX1-203ENST00000456089 HOXA7P31268 230 aaPredicted RBP15.67■□□□□ 0.1
TREX1-203ENST00000456089 Q3C1V9 767 aa15.67■□□□□ 0.1
TREX1-203ENST00000456089 SLC9C2Q5TAH2 1124 aa15.67■□□□□ 0.1
TREX1-203ENST00000456089 MORF4L1Q9UBU8 362 aa15.67■□□□□ 0.1
TREX1-203ENST00000456089 SERPINB13Q9UIV8 391 aa15.67■□□□□ 0.1
TREX1-203ENST00000456089 ZNF532Q9HCE3 1301 aa15.67■□□□□ 0.1
TREX1-203ENST00000456089 FRMPD3Q5JV73 1810 aa15.66■□□□□ 0.1
TREX1-203ENST00000456089 C19orf81C9J6K1 198 aa15.66■□□□□ 0.1
TREX1-203ENST00000456089 CYP2D6P10635 497 aa15.66■□□□□ 0.1
TREX1-203ENST00000456089 CYP2B6P20813 491 aa15.66■□□□□ 0.1
TREX1-203ENST00000456089 SHMT1P34896 483 aa15.66■□□□□ 0.1
TREX1-203ENST00000456089 CERKLQ49MI3 558 aaPredicted RBP15.66■□□□□ 0.1
TREX1-203ENST00000456089 TATDN1Q6P1N9 297 aa15.66■□□□□ 0.1
TREX1-203ENST00000456089 USP17L2Q6R6M4 530 aa15.66■□□□□ 0.1
TREX1-203ENST00000456089 LCORLQ8N3X6 602 aa15.66■□□□□ 0.1
TREX1-203ENST00000456089 ACER1Q8TDN7 264 aa15.66■□□□□ 0.1
TREX1-203ENST00000456089 SDR42E1Q8WUS8 393 aa15.66■□□□□ 0.1
TREX1-203ENST00000456089 FEZ1Q99689 392 aa15.66■□□□□ 0.1
TREX1-203ENST00000456089 LRRCC1Q9C099 1032 aa15.66■□□□□ 0.1
TREX1-203ENST00000456089 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.66■□□□□ 0.1
TREX1-203ENST00000456089 PORCNQ9H237 461 aa15.66■□□□□ 0.1
TREX1-203ENST00000456089 RBPJLQ9UBG7 517 aa15.66■□□□□ 0.1
TREX1-203ENST00000456089 TRIOBPQ9H2D6 2365 aa15.66■□□□□ 0.1
TREX1-203ENST00000456089 TCRBV5S4A2TA0A5A2 114 aa15.65■□□□□ 0.1
TREX1-203ENST00000456089 IGSF3O75054 1194 aa15.65■□□□□ 0.1
TREX1-203ENST00000456089 POLR3DP05423 398 aaPredicted RBP15.65■□□□□ 0.1
TREX1-203ENST00000456089 ABCB5Q2M3G0 1257 aa15.65■□□□□ 0.1
TREX1-203ENST00000456089 CHRDL2Q6WN34 429 aa15.65■□□□□ 0.1
TREX1-203ENST00000456089 DIS3LQ8TF46 1054 aaKnown RBP15.65■□□□□ 0.1
TREX1-203ENST00000456089 TRIB2Q92519 343 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms