RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 BRINP3Q76B58 766 aa20.22■□□□□ 0.83
PTPN6-204ENST00000456013 TMTC2Q8N394 836 aa20.22■□□□□ 0.83
PTPN6-204ENST00000456013 MED15Q96RN5 788 aa20.22■□□□□ 0.83
PTPN6-204ENST00000456013 MRFAP1Q9Y605 127 aa20.22■□□□□ 0.83
PTPN6-204ENST00000456013 CCDC66A2RUB6 948 aa20.22■□□□□ 0.83
PTPN6-204ENST00000456013 GNAT2P19087 354 aa20.22■□□□□ 0.83
PTPN6-204ENST00000456013 PLCD1P51178 756 aa20.22■□□□□ 0.83
PTPN6-204ENST00000456013 ZNF827Q17R98 1081 aa20.22■□□□□ 0.83
PTPN6-204ENST00000456013 TRMT44Q8IYL2 757 aaKnown RBP20.22■□□□□ 0.83
PTPN6-204ENST00000456013 ABCA3Q99758 1704 aa20.22■□□□□ 0.83
PTPN6-204ENST00000456013 SLC5A1P13866 664 aa20.21■□□□□ 0.83
PTPN6-204ENST00000456013 NR5A1Q13285 461 aa20.21■□□□□ 0.83
PTPN6-204ENST00000456013 RASGRF1Q13972 1273 aa20.21■□□□□ 0.83
PTPN6-204ENST00000456013 HELBQ8NG08 1087 aaPredicted RBP20.21■□□□□ 0.83
PTPN6-204ENST00000456013 KIFC2Q96AC6 838 aa20.21■□□□□ 0.83
PTPN6-204ENST00000456013 A0A1B0GTH6 734 aa20.21■□□□□ 0.83
PTPN6-204ENST00000456013 ERICH2A1L162 156 aa20.21■□□□□ 0.83
PTPN6-204ENST00000456013 CT47A1Q5JQC4 288 aaPredicted RBP20.21■□□□□ 0.83
PTPN6-204ENST00000456013 RRP12Q5JTH9 1297 aaKnown RBP20.21■□□□□ 0.83
PTPN6-204ENST00000456013 GRAMD1CQ8IYS0 662 aa20.21■□□□□ 0.83
PTPN6-204ENST00000456013 GPR161Q8N6U8 529 aaKnown RBP20.21■□□□□ 0.83
PTPN6-204ENST00000456013 NACAP1Q9BZK3 213 aa20.21■□□□□ 0.83
PTPN6-204ENST00000456013 STRN4Q9NRL3 753 aa20.21■□□□□ 0.83
PTPN6-204ENST00000456013 SAMSN1Q9NSI8 373 aaKnown RBP20.21■□□□□ 0.83
PTPN6-204ENST00000456013 PNPLA7Q6ZV29 1317 aa20.2■□□□□ 0.82
PTPN6-204ENST00000456013 ZKSCAN3Q9BRR0 538 aa20.2■□□□□ 0.82
PTPN6-204ENST00000456013 PRKAB2O43741 272 aa20.2■□□□□ 0.82
PTPN6-204ENST00000456013 TDO2P48775 406 aa20.2■□□□□ 0.82
PTPN6-204ENST00000456013 PPP2R3AQ06190 1150 aa20.2■□□□□ 0.82
PTPN6-204ENST00000456013 RSRC2Q7L4I2 434 aaKnown RBP20.2■□□□□ 0.82
PTPN6-204ENST00000456013 CSRNP2Q9H175 543 aa20.2■□□□□ 0.82
PTPN6-204ENST00000456013 XIRP1Q702N8 1843 aaKnown RBP20.19■□□□□ 0.82
PTPN6-204ENST00000456013 CYP19A1P11511 503 aaPredicted RBP20.19■□□□□ 0.82
PTPN6-204ENST00000456013 FANCBQ8NB91 859 aa20.19■□□□□ 0.82
PTPN6-204ENST00000456013 TOMM22Q9NS69 142 aa20.19■□□□□ 0.82
PTPN6-204ENST00000456013 EVA1CP58658 441 aa20.19■□□□□ 0.82
PTPN6-204ENST00000456013 ZNF654Q8IZM8 581 aa20.19■□□□□ 0.82
PTPN6-204ENST00000456013 LCORLQ8N3X6 602 aa20.19■□□□□ 0.82
PTPN6-204ENST00000456013 CCDC82Q8N4S0 544 aa20.19■□□□□ 0.82
PTPN6-204ENST00000456013 OXER1Q8TDS5 423 aa20.19■□□□□ 0.82
PTPN6-204ENST00000456013 PANX2Q96RD6 677 aa20.19■□□□□ 0.82
PTPN6-204ENST00000456013 SEC31BQ9NQW1 1179 aa20.19■□□□□ 0.82
PTPN6-204ENST00000456013 SLC4A4Q9Y6R1 1079 aa20.19■□□□□ 0.82
PTPN6-204ENST00000456013 USP49Q70CQ1 688 aa20.18■□□□□ 0.82
PTPN6-204ENST00000456013 RNF41Q9H4P4 317 aaPredicted RBP20.18■□□□□ 0.82
PTPN6-204ENST00000456013 CABP5Q9NP86 173 aa20.18■□□□□ 0.82
PTPN6-204ENST00000456013 AATFQ9NY61 560 aaKnown RBP eCLIP20.18■□□□□ 0.82
PTPN6-204ENST00000456013 ERVV-1B6SEH8 477 aa20.17■□□□□ 0.82
PTPN6-204ENST00000456013 AKR1B15C9JRZ8 316 aaPredicted RBP20.17■□□□□ 0.82
PTPN6-204ENST00000456013 SEC31AO94979 1220 aaKnown RBP20.17■□□□□ 0.82
PTPN6-204ENST00000456013 CYP2C19P33261 490 aa20.17■□□□□ 0.82
PTPN6-204ENST00000456013 CC2D1AQ6P1N0 951 aaPredicted RBP20.17■□□□□ 0.82
PTPN6-204ENST00000456013 CMTR1Q8N1G2 835 aaKnown RBP20.17■□□□□ 0.82
PTPN6-204ENST00000456013 CCDC34Q96HJ3 373 aa20.17■□□□□ 0.82
PTPN6-204ENST00000456013 UBXN6Q9BZV1 441 aa20.17■□□□□ 0.82
PTPN6-204ENST00000456013 SOS2Q07890 1332 aaPredicted RBP20.17■□□□□ 0.82
PTPN6-204ENST00000456013 PLCH1Q4KWH8 1693 aa20.17■□□□□ 0.82
PTPN6-204ENST00000456013 APTXQ7Z2E3 356 aaKnown RBP20.17■□□□□ 0.82
PTPN6-204ENST00000456013 RABGGTAQ92696 567 aa20.17■□□□□ 0.82
PTPN6-204ENST00000456013 AK7Q96M32 723 aa20.17■□□□□ 0.82
PTPN6-204ENST00000456013 RNF26Q9BY78 433 aaPredicted RBP20.17■□□□□ 0.82
PTPN6-204ENST00000456013 ZBTB1Q9Y2K1 713 aa20.17■□□□□ 0.82
PTPN6-204ENST00000456013 SPATA1Q5VX52 437 aa20.16■□□□□ 0.82
PTPN6-204ENST00000456013 NUP133Q8WUM0 1156 aa20.16■□□□□ 0.82
PTPN6-204ENST00000456013 SLC4A9Q96Q91 983 aa20.16■□□□□ 0.82
PTPN6-204ENST00000456013 NAA15Q9BXJ9 866 aaKnown RBP20.16■□□□□ 0.82
PTPN6-204ENST00000456013 NHSL1Q5SYE7 1610 aa20.16■□□□□ 0.82
PTPN6-204ENST00000456013 TBC1D8O95759 1140 aa20.16■□□□□ 0.82
PTPN6-204ENST00000456013 CCDC175P0C221 793 aa20.16■□□□□ 0.82
PTPN6-204ENST00000456013 ATP2B1P20020 1258 aa20.16■□□□□ 0.82
PTPN6-204ENST00000456013 PPP2R5BQ15173 497 aa20.16■□□□□ 0.82
PTPN6-204ENST00000456013 TEX35Q5T0J7 233 aa20.16■□□□□ 0.82
PTPN6-204ENST00000456013 ZNF34Q8IZ26 560 aa20.16■□□□□ 0.82
PTPN6-204ENST00000456013 DESI2Q9BSY9 194 aa20.16■□□□□ 0.82
PTPN6-204ENST00000456013 EPC1Q9H2F5 836 aa20.16■□□□□ 0.82
PTPN6-204ENST00000456013 MYH2Q9UKX2 1941 aa20.15■□□□□ 0.82
PTPN6-204ENST00000456013 SH3RF1Q7Z6J0 888 aa20.15■□□□□ 0.82
PTPN6-204ENST00000456013 DHX58Q96C10 678 aa20.15■□□□□ 0.82
PTPN6-204ENST00000456013 MRPL44Q9H9J2 332 aaKnown RBP20.15■□□□□ 0.82
PTPN6-204ENST00000456013 TRIM75PA6NK02 468 aa20.15■□□□□ 0.82
PTPN6-204ENST00000456013 TEX33O43247 280 aa20.15■□□□□ 0.82
PTPN6-204ENST00000456013 CUL4BQ13620 913 aa20.15■□□□□ 0.82
PTPN6-204ENST00000456013 KARSQ15046 597 aaKnown RBP20.15■□□□□ 0.82
PTPN6-204ENST00000456013 GOLGA1Q92805 767 aa20.15■□□□□ 0.82
PTPN6-204ENST00000456013 UBAC1Q9BSL1 405 aa20.15■□□□□ 0.82
PTPN6-204ENST00000456013 SNAP23O00161 211 aa20.14■□□□□ 0.82
PTPN6-204ENST00000456013 PBX1P40424 430 aa20.14■□□□□ 0.82
PTPN6-204ENST00000456013 PPARAQ07869 468 aa20.14■□□□□ 0.82
PTPN6-204ENST00000456013 MTF1Q14872 753 aa20.14■□□□□ 0.82
PTPN6-204ENST00000456013 SEC23AQ15436 765 aa20.14■□□□□ 0.82
PTPN6-204ENST00000456013 DZIP3Q86Y13 1208 aaKnown RBP20.14■□□□□ 0.82
PTPN6-204ENST00000456013 CCDC12Q8WUD4 166 aaPredicted RBP20.14■□□□□ 0.82
PTPN6-204ENST00000456013 RTL9Q8NET4 1388 aa20.14■□□□□ 0.81
PTPN6-204ENST00000456013 SLIT2O94813 1529 aa20.14■□□□□ 0.81
PTPN6-204ENST00000456013 A0A087X0B3 334 aa20.14■□□□□ 0.81
PTPN6-204ENST00000456013 SASH3O75995 380 aa20.14■□□□□ 0.81
PTPN6-204ENST00000456013 XBP1P17861 261 aa20.14■□□□□ 0.81
PTPN6-204ENST00000456013 SHISA4Q96DD7 197 aa20.14■□□□□ 0.81
PTPN6-204ENST00000456013 PARD6BQ9BYG5 372 aa20.14■□□□□ 0.81
PTPN6-204ENST00000456013 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms