RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 MICU3Q86XE3 530 aa19.6■□□□□ 0.73
PDXDC1-204ENST00000455313 ZNF444Q8N0Y2 327 aaPredicted RBP19.6■□□□□ 0.73
PDXDC1-204ENST00000455313 SLC12A7Q9Y666 1083 aa19.6■□□□□ 0.73
PDXDC1-204ENST00000455313 ATRNL1Q5VV63 1379 aa19.6■□□□□ 0.73
PDXDC1-204ENST00000455313 RXRAP19793 462 aa19.6■□□□□ 0.73
PDXDC1-204ENST00000455313 RAB3GAP1Q15042 981 aa19.6■□□□□ 0.73
PDXDC1-204ENST00000455313 MICALL2Q8IY33 904 aa19.6■□□□□ 0.73
PDXDC1-204ENST00000455313 TMTC2Q8N394 836 aa19.6■□□□□ 0.73
PDXDC1-204ENST00000455313 MYL10Q9BUA6 226 aa19.6■□□□□ 0.73
PDXDC1-204ENST00000455313 EHD4Q9H223 541 aa19.6■□□□□ 0.73
PDXDC1-204ENST00000455313 ZBTB43O43298 467 aa19.59■□□□□ 0.73
PDXDC1-204ENST00000455313 JAK2O60674 1132 aa19.59■□□□□ 0.73
PDXDC1-204ENST00000455313 CTDNEP1O95476 244 aa19.59■□□□□ 0.73
PDXDC1-204ENST00000455313 EGFRP00533 1210 aa19.59■□□□□ 0.73
PDXDC1-204ENST00000455313 TSPY3P0CV98 308 aa19.59■□□□□ 0.73
PDXDC1-204ENST00000455313 TSPY8P0CW00 308 aa19.59■□□□□ 0.73
PDXDC1-204ENST00000455313 NBPF9Q3BBW0 867 aa19.59■□□□□ 0.73
PDXDC1-204ENST00000455313 ZSCAN29Q8IWY8 852 aaPredicted RBP19.59■□□□□ 0.73
PDXDC1-204ENST00000455313 TCP10L2B9ZVM9 353 aa19.59■□□□□ 0.73
PDXDC1-204ENST00000455313 METAP2P50579 478 aaKnown RBP eCLIP19.59■□□□□ 0.73
PDXDC1-204ENST00000455313 NUCB2P80303 420 aa19.59■□□□□ 0.73
PDXDC1-204ENST00000455313 IFIT1BQ5T764 474 aaKnown RBP19.59■□□□□ 0.73
PDXDC1-204ENST00000455313 NSUN7Q8NE18 718 aaKnown RBP19.59■□□□□ 0.73
PDXDC1-204ENST00000455313 LLPHQ9BRT6 129 aaKnown RBP19.59■□□□□ 0.73
PDXDC1-204ENST00000455313 MYO1BO43795 1136 aa19.58■□□□□ 0.72
PDXDC1-204ENST00000455313 IL17RBQ9NRM6 502 aa19.58■□□□□ 0.72
PDXDC1-204ENST00000455313 RNF181Q9P0P0 153 aa19.58■□□□□ 0.72
PDXDC1-204ENST00000455313 SWAP70Q9UH65 585 aa19.58■□□□□ 0.72
PDXDC1-204ENST00000455313 CNOT7Q9UIV1 285 aaKnown RBP19.58■□□□□ 0.72
PDXDC1-204ENST00000455313 NID2Q14112 1375 aa19.57■□□□□ 0.72
PDXDC1-204ENST00000455313 ZNF654Q8IZM8 581 aa19.57■□□□□ 0.72
PDXDC1-204ENST00000455313 GPC2Q8N158 579 aa19.57■□□□□ 0.72
PDXDC1-204ENST00000455313 SMARCC2Q8TAQ2 1214 aa19.57■□□□□ 0.72
PDXDC1-204ENST00000455313 DNAJC18Q9H819 358 aa19.57■□□□□ 0.72
PDXDC1-204ENST00000455313 VEZTQ9HBM0 779 aa19.57■□□□□ 0.72
PDXDC1-204ENST00000455313 PI4KBQ9UBF8 816 aa19.57■□□□□ 0.72
PDXDC1-204ENST00000455313 CNTNAP1P78357 1384 aa19.57■□□□□ 0.72
PDXDC1-204ENST00000455313 PTPDC1A2A3K4 754 aa19.57■□□□□ 0.72
PDXDC1-204ENST00000455313 DHX16O60231 1041 aaKnown RBP19.57■□□□□ 0.72
PDXDC1-204ENST00000455313 SLURP2P0DP57 97 aa19.57■□□□□ 0.72
PDXDC1-204ENST00000455313 FKBP1CQ5VVH2 108 aa19.57■□□□□ 0.72
PDXDC1-204ENST00000455313 RCSD1Q6JBY9 416 aa19.57■□□□□ 0.72
PDXDC1-204ENST00000455313 SYNE3Q6ZMZ3 975 aa19.57■□□□□ 0.72
PDXDC1-204ENST00000455313 CCDC144CPQ8IYA2 1237 aa19.57■□□□□ 0.72
PDXDC1-204ENST00000455313 CHMP4CQ96CF2 233 aa19.57■□□□□ 0.72
PDXDC1-204ENST00000455313 GOLGA8AA7E2F4 631 aa19.56■□□□□ 0.72
PDXDC1-204ENST00000455313 SHMT1P34896 483 aa19.56■□□□□ 0.72
PDXDC1-204ENST00000455313 SAMD7Q7Z3H4 446 aa19.56■□□□□ 0.72
PDXDC1-204ENST00000455313 TCP11L1Q9NUJ3 509 aa19.56■□□□□ 0.72
PDXDC1-204ENST00000455313 ZDHHC9Q9Y397 364 aa19.56■□□□□ 0.72
PDXDC1-204ENST00000455313 PLIN4Q96Q06 1357 aa19.56■□□□□ 0.72
PDXDC1-204ENST00000455313 RCAN1P53805 252 aa19.56■□□□□ 0.72
PDXDC1-204ENST00000455313 RBM26Q5T8P6 1007 aaKnown RBP19.56■□□□□ 0.72
PDXDC1-204ENST00000455313 CRACR2BQ8N4Y2 399 aaPredicted RBP19.56■□□□□ 0.72
PDXDC1-204ENST00000455313 NEDD1Q8NHV4 660 aa19.56■□□□□ 0.72
PDXDC1-204ENST00000455313 CSRNP1Q96S65 589 aa19.56■□□□□ 0.72
PDXDC1-204ENST00000455313 FAM196BA6NMK8 535 aa19.55■□□□□ 0.72
PDXDC1-204ENST00000455313 SYT1P21579 422 aa19.55■□□□□ 0.72
PDXDC1-204ENST00000455313 CDC27P30260 824 aa19.55■□□□□ 0.72
PDXDC1-204ENST00000455313 TBC1D10BQ4KMP7 808 aaPredicted RBP19.55■□□□□ 0.72
PDXDC1-204ENST00000455313 FAM151AQ8WW52 585 aa19.55■□□□□ 0.72
PDXDC1-204ENST00000455313 TNPO1Q92973 898 aaKnown RBP19.55■□□□□ 0.72
PDXDC1-204ENST00000455313 DDX11Q96FC9 970 aa19.55■□□□□ 0.72
PDXDC1-204ENST00000455313 GREB1LQ9C091 1923 aaPredicted RBP19.55■□□□□ 0.72
PDXDC1-204ENST00000455313 CPLX1O14810 134 aa19.54■□□□□ 0.72
PDXDC1-204ENST00000455313 PPFIA3O75145 1194 aa19.54■□□□□ 0.72
PDXDC1-204ENST00000455313 ADD1P35611 737 aaKnown RBP19.54■□□□□ 0.72
PDXDC1-204ENST00000455313 DGKHQ86XP1 1220 aa19.54■□□□□ 0.72
PDXDC1-204ENST00000455313 FAM217BQ9NTX9 383 aaPredicted RBP19.54■□□□□ 0.72
PDXDC1-204ENST00000455313 BRD1O95696 1058 aa19.54■□□□□ 0.72
PDXDC1-204ENST00000455313 HMGN5P82970 282 aaKnown RBP19.54■□□□□ 0.72
PDXDC1-204ENST00000455313 KIF4BQ2VIQ3 1234 aa19.54■□□□□ 0.72
PDXDC1-204ENST00000455313 CCDC178Q5BJE1 867 aa19.54■□□□□ 0.72
PDXDC1-204ENST00000455313 C9orf131Q5VYM1 1079 aa19.54■□□□□ 0.72
PDXDC1-204ENST00000455313 CATIPQ7Z7H3 387 aa19.54■□□□□ 0.72
PDXDC1-204ENST00000455313 FAM83AQ86UY5 434 aa19.54■□□□□ 0.72
PDXDC1-204ENST00000455313 GPRC5DQ9NZD1 345 aa19.54■□□□□ 0.72
PDXDC1-204ENST00000455313 AKR1B1P15121 316 aa19.53■□□□□ 0.72
PDXDC1-204ENST00000455313 TROAPQ12815 778 aa19.53■□□□□ 0.72
PDXDC1-204ENST00000455313 GPR162Q16538 588 aa19.53■□□□□ 0.72
PDXDC1-204ENST00000455313 METTL16Q86W50 562 aaKnown RBP19.53■□□□□ 0.72
PDXDC1-204ENST00000455313 NUP133Q8WUM0 1156 aa19.53■□□□□ 0.72
PDXDC1-204ENST00000455313 ANKS1AQ92625 1134 aa19.53■□□□□ 0.72
PDXDC1-204ENST00000455313 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.53■□□□□ 0.72
PDXDC1-204ENST00000455313 TAOK2Q9UL54 1235 aa19.53■□□□□ 0.72
PDXDC1-204ENST00000455313 STX8Q9UNK0 236 aa19.53■□□□□ 0.72
PDXDC1-204ENST00000455313 STX6O43752 255 aa19.53■□□□□ 0.72
PDXDC1-204ENST00000455313 RTN1Q16799 776 aa19.53■□□□□ 0.72
PDXDC1-204ENST00000455313 FOXP4Q8IVH2 680 aaPredicted RBP19.53■□□□□ 0.72
PDXDC1-204ENST00000455313 TMEM39BQ9GZU3 492 aa19.53■□□□□ 0.72
PDXDC1-204ENST00000455313 H7C1D1 291 aa19.52■□□□□ 0.72
PDXDC1-204ENST00000455313 DDAH1O94760 285 aa19.52■□□□□ 0.72
PDXDC1-204ENST00000455313 PDCP20941 246 aa19.52■□□□□ 0.72
PDXDC1-204ENST00000455313 FANCBQ8NB91 859 aa19.52■□□□□ 0.72
PDXDC1-204ENST00000455313 CEP95Q96GE4 821 aa19.52■□□□□ 0.72
PDXDC1-204ENST00000455313 TRIM34Q9BYJ4 488 aa19.52■□□□□ 0.72
PDXDC1-204ENST00000455313 ASTN2O75129 1339 aaPredicted RBP19.52■□□□□ 0.71
PDXDC1-204ENST00000455313 WDR33Q9C0J8 1336 aaKnown RBP19.52■□□□□ 0.71
PDXDC1-204ENST00000455313 NTRK3Q16288 839 aa19.51■□□□□ 0.71
PDXDC1-204ENST00000455313 FOXD4L5Q5VV16 416 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms