RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 TLR2O60603 784 aa21.3■■□□□ 1
COPS7A-202ENST00000455113 SPP2Q13103 211 aa21.3■■□□□ 1
COPS7A-202ENST00000455113 APPBP2Q92624 585 aa21.3■■□□□ 1
COPS7A-202ENST00000455113 PARK7Q99497 189 aaKnown RBP21.3■■□□□ 1
COPS7A-202ENST00000455113 PUS7LQ9H0K6 701 aaKnown RBP21.3■■□□□ 1
COPS7A-202ENST00000455113 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.3■■□□□ 1
COPS7A-202ENST00000455113 GDF11O95390 407 aa21.29■■□□□ 1
COPS7A-202ENST00000455113 CCDC84Q86UT8 332 aaPredicted RBP21.29■■□□□ 1
COPS7A-202ENST00000455113 CABP5Q9NP86 173 aa21.29■■□□□ 1
COPS7A-202ENST00000455113 PLCD1P51178 756 aa21.29■■□□□ 1
COPS7A-202ENST00000455113 KIF22Q14807 665 aa21.29■■□□□ 1
COPS7A-202ENST00000455113 CERKLQ49MI3 558 aaPredicted RBP21.29■■□□□ 1
COPS7A-202ENST00000455113 PHIPQ8WWQ0 1821 aa21.29■■□□□ 1
COPS7A-202ENST00000455113 SALL3Q9BXA9 1300 aa21.28■■□□□ 1
COPS7A-202ENST00000455113 PDE1AP54750 535 aa21.28■■□□□ 1
COPS7A-202ENST00000455113 RRP1BQ14684 758 aaKnown RBP21.28■■□□□ 1
COPS7A-202ENST00000455113 TATDN1Q6P1N9 297 aa21.28■■□□□ 1
COPS7A-202ENST00000455113 PLEKHM2Q8IWE5 1019 aa21.28■■□□□ 1
COPS7A-202ENST00000455113 TAOK2Q9UL54 1235 aa21.28■■□□□ 1
COPS7A-202ENST00000455113 ZBTB21Q9ULJ3 1066 aa21.28■■□□□ 1
COPS7A-202ENST00000455113 PRKAB2O43741 272 aa21.27■■□□□ 1
COPS7A-202ENST00000455113 CHGBP05060 677 aa21.27■■□□□ 1
COPS7A-202ENST00000455113 PROCA1Q8NCQ7 364 aaPredicted RBP21.27■■□□□ 1
COPS7A-202ENST00000455113 STAP2Q9UGK3 403 aa21.27■■□□□ 1
COPS7A-202ENST00000455113 SLC45A1Q9Y2W3 748 aa21.27■■□□□ 1
COPS7A-202ENST00000455113 TRIM17Q9Y577 477 aa21.27■■□□□ 1
COPS7A-202ENST00000455113 PTPRFP10586 1907 aa21.27■□□□□ 0.99
COPS7A-202ENST00000455113 GNAT2P19087 354 aa21.26■□□□□ 0.99
COPS7A-202ENST00000455113 PABPC4Q13310 644 aaKnown RBP eCLIP21.26■□□□□ 0.995e-9■□□□□ 9.2
COPS7A-202ENST00000455113 EVI5LQ96CN4 794 aa21.26■□□□□ 0.99
COPS7A-202ENST00000455113 TMOD4Q9NZQ9 345 aa21.26■□□□□ 0.99
COPS7A-202ENST00000455113 SWAP70Q9UH65 585 aa21.26■□□□□ 0.99
COPS7A-202ENST00000455113 PNMA3Q9UL41 463 aa21.26■□□□□ 0.99
COPS7A-202ENST00000455113 CCDC85CA6NKD9 419 aa21.26■□□□□ 0.99
COPS7A-202ENST00000455113 GH2P01242 217 aa21.26■□□□□ 0.99
COPS7A-202ENST00000455113 MOGSQ13724 837 aa21.26■□□□□ 0.99
COPS7A-202ENST00000455113 ABCB5Q2M3G0 1257 aa21.26■□□□□ 0.99
COPS7A-202ENST00000455113 CD99L2Q8TCZ2 262 aa21.26■□□□□ 0.99
COPS7A-202ENST00000455113 SMCR8Q8TEV9 937 aaPredicted RBP21.26■□□□□ 0.99
COPS7A-202ENST00000455113 WDR18Q9BV38 432 aa21.26■□□□□ 0.99
COPS7A-202ENST00000455113 AGTPBP1Q9UPW5 1226 aa21.26■□□□□ 0.99
COPS7A-202ENST00000455113 DDX60LQ5H9U9 1706 aaKnown RBP21.25■□□□□ 0.99
COPS7A-202ENST00000455113 C19orf81C9J6K1 198 aa21.25■□□□□ 0.99
COPS7A-202ENST00000455113 USP17L10C9JJH3 530 aa21.25■□□□□ 0.99
COPS7A-202ENST00000455113 HMGCS2P54868 508 aa21.25■□□□□ 0.99
COPS7A-202ENST00000455113 RAB3GAP1Q15042 981 aa21.25■□□□□ 0.99
COPS7A-202ENST00000455113 GPAT2Q6NUI2 795 aa21.25■□□□□ 0.99
COPS7A-202ENST00000455113 OSBP2Q969R2 916 aa21.25■□□□□ 0.99
COPS7A-202ENST00000455113 STRBPQ96SI9 672 aaKnown RBP21.25■□□□□ 0.99
COPS7A-202ENST00000455113 EFCC1Q9HA90 598 aa21.25■□□□□ 0.99
COPS7A-202ENST00000455113 ARPP21Q9UBL0 812 aaPredicted RBP21.25■□□□□ 0.99
COPS7A-202ENST00000455113 BAZ2AQ9UIF9 1905 aaKnown RBP21.25■□□□□ 0.99
COPS7A-202ENST00000455113 APPP05067 770 aa21.24■□□□□ 0.99
COPS7A-202ENST00000455113 BACE1P56817 501 aa21.24■□□□□ 0.99
COPS7A-202ENST00000455113 MTMR2Q13614 643 aa21.24■□□□□ 0.99
COPS7A-202ENST00000455113 USP17L12C9JPN9 530 aa21.24■□□□□ 0.99
COPS7A-202ENST00000455113 USP17L21D6R901 530 aa21.24■□□□□ 0.99
COPS7A-202ENST00000455113 MPHOSPH10O00566 681 aaKnown RBP21.24■□□□□ 0.99
COPS7A-202ENST00000455113 GPAA1O43292 621 aa21.24■□□□□ 0.99
COPS7A-202ENST00000455113 FBXO46Q6PJ61 603 aaPredicted RBP21.24■□□□□ 0.99
COPS7A-202ENST00000455113 FEZ1Q99689 392 aa21.24■□□□□ 0.99
COPS7A-202ENST00000455113 CPA4Q9UI42 421 aa21.24■□□□□ 0.99
COPS7A-202ENST00000455113 TRIM6-TRIM34B2RNG4 842 aa21.23■□□□□ 0.99
COPS7A-202ENST00000455113 CYP2C8P10632 490 aa21.23■□□□□ 0.99
COPS7A-202ENST00000455113 OSBPP22059 807 aa21.23■□□□□ 0.99
COPS7A-202ENST00000455113 SHMT1P34896 483 aa21.23■□□□□ 0.99
COPS7A-202ENST00000455113 GABPAQ06546 454 aa21.23■□□□□ 0.99
COPS7A-202ENST00000455113 SH3D19Q5HYK7 790 aa21.23■□□□□ 0.99
COPS7A-202ENST00000455113 GIMAP6Q6P9H5 292 aa21.23■□□□□ 0.99
COPS7A-202ENST00000455113 OTOP1Q7RTM1 612 aa21.23■□□□□ 0.99
COPS7A-202ENST00000455113 OSBPL3Q9H4L5 887 aa21.23■□□□□ 0.99
COPS7A-202ENST00000455113 MYH8P13535 1937 aa21.22■□□□□ 0.99
COPS7A-202ENST00000455113 C12orf60Q5U649 245 aa21.22■□□□□ 0.99
COPS7A-202ENST00000455113 C17orf99Q6UX52 265 aa21.22■□□□□ 0.99
COPS7A-202ENST00000455113 NACAP1Q9BZK3 213 aa21.22■□□□□ 0.99
COPS7A-202ENST00000455113 CYP2D6P10635 497 aa21.21■□□□□ 0.99
COPS7A-202ENST00000455113 TDO2P48775 406 aa21.21■□□□□ 0.99
COPS7A-202ENST00000455113 LACTBP83111 547 aaPredicted RBP21.21■□□□□ 0.99
COPS7A-202ENST00000455113 JAG1P78504 1218 aa21.21■□□□□ 0.99
COPS7A-202ENST00000455113 TREML2Q5T2D2 321 aa21.21■□□□□ 0.99
COPS7A-202ENST00000455113 CTR9Q6PD62 1173 aa21.21■□□□□ 0.99
COPS7A-202ENST00000455113 M0R2C6 588 aa21.2■□□□□ 0.98
COPS7A-202ENST00000455113 GNRH1P01148 92 aa21.2■□□□□ 0.98
COPS7A-202ENST00000455113 USP14P54578 494 aa21.2■□□□□ 0.98
COPS7A-202ENST00000455113 SHROOM1Q2M3G4 852 aaPredicted RBP21.2■□□□□ 0.98
COPS7A-202ENST00000455113 ZMYM1Q5SVZ6 1142 aa21.2■□□□□ 0.98
COPS7A-202ENST00000455113 TICAM2Q86XR7 235 aa21.2■□□□□ 0.98
COPS7A-202ENST00000455113 RILPL2Q969X0 211 aa21.2■□□□□ 0.98
COPS7A-202ENST00000455113 DYNLL2Q96FJ2 89 aa21.2■□□□□ 0.98
COPS7A-202ENST00000455113 GSG1L2A8MUP6 293 aa21.19■□□□□ 0.98
COPS7A-202ENST00000455113 PATL2C9JE40 543 aaKnown RBP21.19■□□□□ 0.98
COPS7A-202ENST00000455113 IRX3P78415 501 aaPredicted RBP21.19■□□□□ 0.98
COPS7A-202ENST00000455113 USP17L2Q6R6M4 530 aa21.19■□□□□ 0.98
COPS7A-202ENST00000455113 TMEM179Q6ZVK1 233 aa21.19■□□□□ 0.98
COPS7A-202ENST00000455113 CCDC17Q96LX7 622 aa21.19■□□□□ 0.98
COPS7A-202ENST00000455113 HPS5Q9UPZ3 1129 aa21.19■□□□□ 0.98
COPS7A-202ENST00000455113 LOC285556D6RIA3 1793 aa21.19■□□□□ 0.98
COPS7A-202ENST00000455113 MINDY4BA8MYZ0 360 aa21.18■□□□□ 0.98
COPS7A-202ENST00000455113 CDK8P49336 464 aa21.18■□□□□ 0.98
COPS7A-202ENST00000455113 SBK1Q52WX2 424 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms