RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 FOXP4Q8IVH2 680 aaPredicted RBP19.61■□□□□ 0.73
GPC1-206ENST00000455111 RHPN1Q8TCX5 695 aa19.61■□□□□ 0.73
GPC1-206ENST00000455111 PXYLP1Q8TE99 480 aa19.61■□□□□ 0.73
GPC1-206ENST00000455111 P2RX7Q99572 595 aaKnown RBP19.61■□□□□ 0.73
GPC1-206ENST00000455111 NOL10Q9BSC4 688 aaKnown RBP19.61■□□□□ 0.73
GPC1-206ENST00000455111 COLQQ9Y215 455 aaPredicted RBP19.61■□□□□ 0.73
GPC1-206ENST00000455111 SLFNL1Q499Z3 407 aa19.6■□□□□ 0.73
GPC1-206ENST00000455111 TATDN1Q6P1N9 297 aa19.6■□□□□ 0.73
GPC1-206ENST00000455111 U2AF1L4Q8WU68 220 aaKnown RBP19.6■□□□□ 0.73
GPC1-206ENST00000455111 EDC3Q96F86 508 aaKnown RBP19.6■□□□□ 0.73
GPC1-206ENST00000455111 TBC1D2Q9BYX2 928 aa19.6■□□□□ 0.73
GPC1-206ENST00000455111 EMILIN3Q9NT22 766 aa19.6■□□□□ 0.73
GPC1-206ENST00000455111 ZBTB40Q9NUA8 1239 aa19.6■□□□□ 0.73
GPC1-206ENST00000455111 MORF4L1Q9UBU8 362 aa19.6■□□□□ 0.73
GPC1-206ENST00000455111 IGSF3O75054 1194 aa19.59■□□□□ 0.73
GPC1-206ENST00000455111 CHGBP05060 677 aa19.59■□□□□ 0.73
GPC1-206ENST00000455111 ASNSP08243 561 aa19.59■□□□□ 0.73
GPC1-206ENST00000455111 HOXA7P31268 230 aaPredicted RBP19.59■□□□□ 0.73
GPC1-206ENST00000455111 Q3C1V9 767 aa19.59■□□□□ 0.73
GPC1-206ENST00000455111 PAK6Q9NQU5 681 aaPredicted RBP19.59■□□□□ 0.73
GPC1-206ENST00000455111 PNMA3Q9UL41 463 aa19.59■□□□□ 0.73
GPC1-206ENST00000455111 COG6Q9Y2V7 657 aa19.59■□□□□ 0.73
GPC1-206ENST00000455111 RLFQ13129 1914 aa19.59■□□□□ 0.73
GPC1-206ENST00000455111 TCRBV5S4A2TA0A5A2 114 aa19.58■□□□□ 0.72
GPC1-206ENST00000455111 SGPL1O95470 568 aa19.58■□□□□ 0.72
GPC1-206ENST00000455111 GUCY1A2P33402 732 aa19.58■□□□□ 0.72
GPC1-206ENST00000455111 FXR1P51114 621 aaKnown RBP eCLIP19.58■□□□□ 0.72
GPC1-206ENST00000455111 PLCD1P51178 756 aa19.58■□□□□ 0.72
GPC1-206ENST00000455111 C20orf194Q5TEA3 1177 aa19.58■□□□□ 0.72
GPC1-206ENST00000455111 AS3MTQ9HBK9 375 aa19.58■□□□□ 0.72
GPC1-206ENST00000455111 RBPJLQ9UBG7 517 aa19.58■□□□□ 0.72
GPC1-206ENST00000455111 BIN2Q9UBW5 565 aaPredicted RBP19.58■□□□□ 0.72
GPC1-206ENST00000455111 MYH7P12883 1935 aa19.57■□□□□ 0.72
GPC1-206ENST00000455111 BAZ2AQ9UIF9 1905 aaKnown RBP19.57■□□□□ 0.72
GPC1-206ENST00000455111 GH2P01242 217 aa19.57■□□□□ 0.72
GPC1-206ENST00000455111 SHMT1P34896 483 aa19.57■□□□□ 0.72
GPC1-206ENST00000455111 GCLCP48506 637 aaPredicted RBP19.57■□□□□ 0.72
GPC1-206ENST00000455111 UBXN2AP68543 259 aa19.57■□□□□ 0.72
GPC1-206ENST00000455111 CRACR2BQ8N4Y2 399 aaPredicted RBP19.57■□□□□ 0.72
GPC1-206ENST00000455111 GCC1Q96CN9 775 aa19.57■□□□□ 0.72
GPC1-206ENST00000455111 FRMPD3Q5JV73 1810 aa19.56■□□□□ 0.72
GPC1-206ENST00000455111 USP17L10C9JJH3 530 aa19.56■□□□□ 0.72
GPC1-206ENST00000455111 SMIM22K7EJ46 135 aa19.56■□□□□ 0.72
GPC1-206ENST00000455111 APBB1O00213 710 aa19.56■□□□□ 0.72
GPC1-206ENST00000455111 CNMDO75829 334 aa19.56■□□□□ 0.72
GPC1-206ENST00000455111 MNX1P50219 401 aaPredicted RBP19.56■□□□□ 0.72
GPC1-206ENST00000455111 HERVK_113P62684 666 aa19.56■□□□□ 0.72
GPC1-206ENST00000455111 CRISPLD2Q9H0B8 497 aa19.56■□□□□ 0.72
GPC1-206ENST00000455111 SZT2Q5T011 3432 aa19.55■□□□□ 0.72
GPC1-206ENST00000455111 PDE6AP16499 860 aa19.55■□□□□ 0.72
GPC1-206ENST00000455111 GABPAQ06546 454 aa19.55■□□□□ 0.72
GPC1-206ENST00000455111 ERC1Q8IUD2 1116 aa19.55■□□□□ 0.72
GPC1-206ENST00000455111 NKX2-3Q8TAU0 364 aa19.55■□□□□ 0.72
GPC1-206ENST00000455111 ACER1Q8TDN7 264 aa19.55■□□□□ 0.72
GPC1-206ENST00000455111 TRIB2Q92519 343 aa19.55■□□□□ 0.72
GPC1-206ENST00000455111 COA7Q96BR5 231 aa19.55■□□□□ 0.72
GPC1-206ENST00000455111 DEFB118Q96PH6 123 aa19.55■□□□□ 0.72
GPC1-206ENST00000455111 EHD4Q9H223 541 aa19.55■□□□□ 0.72
GPC1-206ENST00000455111 PORCNQ9H237 461 aa19.55■□□□□ 0.72
GPC1-206ENST00000455111 PARP14Q460N5 1801 aa19.55■□□□□ 0.72
GPC1-206ENST00000455111 A0A0G2JMZ2 1700 aa19.54■□□□□ 0.72
GPC1-206ENST00000455111 C19orf81C9J6K1 198 aa19.54■□□□□ 0.72
GPC1-206ENST00000455111 HLA-DOAP06340 250 aa19.54■□□□□ 0.72
GPC1-206ENST00000455111 USP5P45974 858 aa19.54■□□□□ 0.72
GPC1-206ENST00000455111 DIS3LQ8TF46 1054 aaKnown RBP19.54■□□□□ 0.72
GPC1-206ENST00000455111 C12orf42Q96LP6 360 aa19.54■□□□□ 0.72
GPC1-206ENST00000455111 PRO3102Q9H379 93 aa19.54■□□□□ 0.72
GPC1-206ENST00000455111 GINM1Q9NU53 330 aa19.54■□□□□ 0.72
GPC1-206ENST00000455111 TAOK2Q9UL54 1235 aa19.54■□□□□ 0.72
GPC1-206ENST00000455111 MYH8P13535 1937 aa19.54■□□□□ 0.72
GPC1-206ENST00000455111 ZNF532Q9HCE3 1301 aa19.53■□□□□ 0.72
GPC1-206ENST00000455111 RANBP2P49792 3224 aaKnown RBP19.53■□□□□ 0.72
GPC1-206ENST00000455111 FARP2O94887 1054 aaPredicted RBP19.53■□□□□ 0.72
GPC1-206ENST00000455111 CYP2D6P10635 497 aa19.53■□□□□ 0.72
GPC1-206ENST00000455111 MAP3K12Q12852 859 aa19.53■□□□□ 0.72
GPC1-206ENST00000455111 PABPC4Q13310 644 aaKnown RBP eCLIP19.53■□□□□ 0.72
GPC1-206ENST00000455111 RPAP2Q8IXW5 612 aaPredicted RBP19.53■□□□□ 0.72
GPC1-206ENST00000455111 LCORLQ8N3X6 602 aa19.53■□□□□ 0.72
GPC1-206ENST00000455111 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.53■□□□□ 0.72
GPC1-206ENST00000455111 USP6NLQ92738 828 aa19.53■□□□□ 0.72
GPC1-206ENST00000455111 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.53■□□□□ 0.72
GPC1-206ENST00000455111 SERPINB13Q9UIV8 391 aa19.53■□□□□ 0.72
GPC1-206ENST00000455111 GOLIM4O00461 696 aa19.52■□□□□ 0.72
GPC1-206ENST00000455111 ZYXQ15942 572 aaKnown RBP19.52■□□□□ 0.72
GPC1-206ENST00000455111 SDR42E1Q8WUS8 393 aa19.52■□□□□ 0.72
GPC1-206ENST00000455111 KIF1BPQ96EK5 621 aa19.52■□□□□ 0.72
GPC1-206ENST00000455111 TMOD4Q9NZQ9 345 aa19.52■□□□□ 0.72
GPC1-206ENST00000455111 PCDH10Q9P2E7 1040 aa19.52■□□□□ 0.72
GPC1-206ENST00000455111 MAGEB6P1A0A0J9YX57 407 aa19.51■□□□□ 0.71
GPC1-206ENST00000455111 A0A1W2PRG0 241 aa19.51■□□□□ 0.71
GPC1-206ENST00000455111 IRX3P78415 501 aaPredicted RBP19.51■□□□□ 0.71
GPC1-206ENST00000455111 SLC9C2Q5TAH2 1124 aa19.51■□□□□ 0.71
GPC1-206ENST00000455111 MAP3K21Q5TCX8 1036 aa19.51■□□□□ 0.71
GPC1-206ENST00000455111 USP17L2Q6R6M4 530 aa19.51■□□□□ 0.71
GPC1-206ENST00000455111 CHRDL2Q6WN34 429 aa19.51■□□□□ 0.71
GPC1-206ENST00000455111 DPF3Q92784 378 aa19.51■□□□□ 0.71
GPC1-206ENST00000455111 DDX19BQ9UMR2 479 aa19.51■□□□□ 0.71
GPC1-206ENST00000455111 CEP290O15078 2479 aa19.51■□□□□ 0.71
GPC1-206ENST00000455111 PRKAB2O43741 272 aa19.5■□□□□ 0.71
GPC1-206ENST00000455111 HMGCRP04035 888 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms