RNA–Protein interactions for RNA: ENST00000454608.3

USP41-202, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS P5 TSL 5 BASIC

Gene USP41, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-202ENST00000454608 MAP2K5Q13163 448 aa12.91□□□□□ -0.34
USP41-202ENST00000454608 RASGRF1Q13972 1273 aa12.91□□□□□ -0.34
USP41-202ENST00000454608 CCL14Q16627 93 aa12.91□□□□□ -0.34
USP41-202ENST00000454608 MFSD14CQ5VZR4 134 aa12.91□□□□□ -0.34
USP41-202ENST00000454608 SIL1Q9H173 461 aa12.91□□□□□ -0.34
USP41-202ENST00000454608 CWC22Q9HCG8 908 aaKnown RBP12.91□□□□□ -0.34
USP41-202ENST00000454608 PI4KBQ9UBF8 816 aa12.91□□□□□ -0.34
USP41-202ENST00000454608 DDX20Q9UHI6 824 aaKnown RBP12.91□□□□□ -0.34
USP41-202ENST00000454608 SIPA1L1O43166 1804 aa12.9□□□□□ -0.34
USP41-202ENST00000454608 TMEM265A0A087WTH1 108 aa12.9□□□□□ -0.34
USP41-202ENST00000454608 USP17L10C9JJH3 530 aa12.9□□□□□ -0.34
USP41-202ENST00000454608 FOSL2P15408 326 aa12.9□□□□□ -0.34
USP41-202ENST00000454608 RTP1P59025 263 aa12.9□□□□□ -0.34
USP41-202ENST00000454608 CCNA1P78396 465 aa12.9□□□□□ -0.34
USP41-202ENST00000454608 MECOMQ03112 1051 aa12.9□□□□□ -0.34
USP41-202ENST00000454608 SHHQ15465 462 aa12.9□□□□□ -0.34
USP41-202ENST00000454608 Q3C1V9 767 aa12.9□□□□□ -0.34
USP41-202ENST00000454608 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
USP41-202ENST00000454608 MYLIPQ8WY64 445 aa12.9□□□□□ -0.34
USP41-202ENST00000454608 EDC3Q96F86 508 aaKnown RBP12.9□□□□□ -0.34
USP41-202ENST00000454608 PORCNQ9H237 461 aa12.9□□□□□ -0.34
USP41-202ENST00000454608 DHX36Q9H2U1 1008 aaKnown RBP12.9□□□□□ -0.34
USP41-202ENST00000454608 HDAC5Q9UQL6 1122 aa12.9□□□□□ -0.34
USP41-202ENST00000454608 TTC28Q96AY4 2481 aa12.9□□□□□ -0.34
USP41-202ENST00000454608 CDK5RAP2Q96SN8 1893 aa12.89□□□□□ -0.35
USP41-202ENST00000454608 COL9A1P20849 921 aa12.89□□□□□ -0.35
USP41-202ENST00000454608 ATN1P54259 1190 aaPredicted RBP12.89□□□□□ -0.35
USP41-202ENST00000454608 RRP1BQ14684 758 aaKnown RBP12.89□□□□□ -0.35
USP41-202ENST00000454608 FOCADQ5VW36 1801 aa12.89□□□□□ -0.35
USP41-202ENST00000454608 DNAH12Q6ZR08 3092 aa12.89□□□□□ -0.35
USP41-202ENST00000454608 TNFRSF10AO00220 468 aa12.88□□□□□ -0.35
USP41-202ENST00000454608 ADORA1P30542 326 aa12.88□□□□□ -0.35
USP41-202ENST00000454608 MVPQ14764 893 aaKnown RBP12.88□□□□□ -0.35
USP41-202ENST00000454608 TJAP1Q5JTD0 557 aa12.88□□□□□ -0.35
USP41-202ENST00000454608 ARRDC4Q8NCT1 418 aa12.88□□□□□ -0.35
USP41-202ENST00000454608 NSUN4Q96CB9 384 aaKnown RBP12.88□□□□□ -0.35
USP41-202ENST00000454608 PAGR1Q9BTK6 254 aa12.88□□□□□ -0.35
USP41-202ENST00000454608 TTYH1Q9H313 450 aaPredicted RBP12.88□□□□□ -0.35
USP41-202ENST00000454608 AKAP2Q9Y2D5 859 aa12.88□□□□□ -0.35
USP41-202ENST00000454608 RABGAP1Q9Y3P9 1069 aa12.88□□□□□ -0.35
USP41-202ENST00000454608 PRUNE2Q8WUY3 3088 aa12.87□□□□□ -0.35
USP41-202ENST00000454608 SLC15A5A6NIM6 579 aa12.87□□□□□ -0.35
USP41-202ENST00000454608 PEX10O60683 326 aa12.87□□□□□ -0.35
USP41-202ENST00000454608 HOXC6P09630 235 aa12.87□□□□□ -0.35
USP41-202ENST00000454608 UBTFL1P0CB47 393 aaPredicted RBP12.87□□□□□ -0.35
USP41-202ENST00000454608 CNGA1P29973 690 aa12.87□□□□□ -0.35
USP41-202ENST00000454608 ATP2B2Q01814 1243 aa12.87□□□□□ -0.35
USP41-202ENST00000454608 C9orf50Q5SZB4 431 aa12.87□□□□□ -0.35
USP41-202ENST00000454608 USP17L2Q6R6M4 530 aa12.87□□□□□ -0.35
USP41-202ENST00000454608 FOXP4Q8IVH2 680 aaPredicted RBP12.87□□□□□ -0.35
USP41-202ENST00000454608 TEX11Q8IYF3 940 aa12.87□□□□□ -0.35
USP41-202ENST00000454608 ZNF384Q8TF68 577 aa12.87□□□□□ -0.35
USP41-202ENST00000454608 NOL10Q9BSC4 688 aaKnown RBP12.87□□□□□ -0.35
USP41-202ENST00000454608 COPRSQ9NQ92 184 aa12.87□□□□□ -0.35
USP41-202ENST00000454608 ATP11BQ9Y2G3 1177 aa12.87□□□□□ -0.35
USP41-202ENST00000454608 CDH23Q9H251 3354 aa12.87□□□□□ -0.35
USP41-202ENST00000454608 PTPREP23469 700 aa12.86□□□□□ -0.35
USP41-202ENST00000454608 TIMM10P62072 90 aa12.86□□□□□ -0.35
USP41-202ENST00000454608 SLC39A5Q6ZMH5 540 aa12.86□□□□□ -0.35
USP41-202ENST00000454608 METTL16Q86W50 562 aaKnown RBP12.86□□□□□ -0.35
USP41-202ENST00000454608 XAGE2Q96GT9 111 aa12.86□□□□□ -0.35
USP41-202ENST00000454608 TRIM34Q9BYJ4 488 aa12.86□□□□□ -0.35
USP41-202ENST00000454608 FLRT1Q9NZU1 646 aa12.86□□□□□ -0.35
USP41-202ENST00000454608 IVNS1ABPQ9Y6Y0 642 aa12.86□□□□□ -0.35
USP41-202ENST00000454608 A0A1B0GUL7 405 aa12.85□□□□□ -0.35
USP41-202ENST00000454608 KBTBD13C9JR72 458 aa12.85□□□□□ -0.35
USP41-202ENST00000454608 BAG3O95817 575 aa12.85□□□□□ -0.35
USP41-202ENST00000454608 PLCG2P16885 1265 aa12.85□□□□□ -0.35
USP41-202ENST00000454608 SNX17Q15036 470 aa12.85□□□□□ -0.35
USP41-202ENST00000454608 C1orf53Q5VUE5 145 aa12.85□□□□□ -0.35
USP41-202ENST00000454608 CRACR2BQ8N4Y2 399 aaPredicted RBP12.85□□□□□ -0.35
USP41-202ENST00000454608 BADQ92934 168 aa12.85□□□□□ -0.35
USP41-202ENST00000454608 C12orf42Q96LP6 360 aa12.85□□□□□ -0.35
USP41-202ENST00000454608 MRS2Q9HD23 443 aa12.85□□□□□ -0.35
USP41-202ENST00000454608 PRDM5Q9NQX1 630 aaPredicted RBP12.85□□□□□ -0.35
USP41-202ENST00000454608 ZBTB21Q9ULJ3 1066 aa12.85□□□□□ -0.35
USP41-202ENST00000454608 ZNF236Q9UL36 1845 aa12.85□□□□□ -0.35
USP41-202ENST00000454608 USP17L15C9J2P7 530 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 USP17L13C9JLJ4 530 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 USP17L11C9JVI0 530 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 USP17L18D6R9N7 530 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 USP17L22D6RA61 530 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 USP17L17D6RBQ6 530 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 USP17L19D6RCP7 530 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 USP17L20D6RJB6 530 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 USP17L24Q0WX57 530 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 GRB14Q14449 540 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 GJC2Q5T442 439 aaPredicted RBP12.84□□□□□ -0.35
USP41-202ENST00000454608 WDR78Q5VTH9 848 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 POTEEQ6S8J3 1075 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 LBX2Q6XYB7 198 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 SPATA5Q8NB90 893 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 EMILIN3Q9NT22 766 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 RAI14Q9P0K7 980 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 HMG20BQ9P0W2 317 aa12.84□□□□□ -0.35
USP41-202ENST00000454608 PA2G4Q9UQ80 394 aaKnown RBP12.84□□□□□ -0.35
USP41-202ENST00000454608 MUC3AQ02505 3323 aa12.83□□□□□ -0.35
USP41-202ENST00000454608 CNMDO75829 334 aa12.83□□□□□ -0.36
USP41-202ENST00000454608 IGHA2P01877 340 aa12.83□□□□□ -0.36
USP41-202ENST00000454608 CYBAP13498 195 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms