RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 SLC44A5Q8NCS7 719 aa24.9■■□□□ 1.58
CTU2-202ENST00000453996 NUP133Q8WUM0 1156 aa24.9■■□□□ 1.58
CTU2-202ENST00000453996 ZSCAN16Q9H4T2 348 aaPredicted RBP24.9■■□□□ 1.58
CTU2-202ENST00000453996 DDX4Q9NQI0 724 aaKnown RBP24.9■■□□□ 1.58
CTU2-202ENST00000453996 GOLGB1Q14789 3259 aaKnown RBP24.89■■□□□ 1.58
CTU2-202ENST00000453996 STK36Q9NRP7 1315 aa24.89■■□□□ 1.58
CTU2-202ENST00000453996 NMT2O60551 498 aa24.89■■□□□ 1.57
CTU2-202ENST00000453996 CALM1P0DP23 149 aa24.89■■□□□ 1.57
CTU2-202ENST00000453996 CALM2P0DP24 149 aa24.89■■□□□ 1.57
CTU2-202ENST00000453996 CALM3P0DP25 149 aa24.89■■□□□ 1.57
CTU2-202ENST00000453996 NCLP19338 710 aaKnown RBP24.89■■□□□ 1.57
CTU2-202ENST00000453996 IARSP41252 1262 aaKnown RBP24.89■■□□□ 1.57
CTU2-202ENST00000453996 DNM1Q05193 864 aaKnown RBP24.89■■□□□ 1.57
CTU2-202ENST00000453996 CCDC178Q5BJE1 867 aa24.89■■□□□ 1.57
CTU2-202ENST00000453996 TTC6Q86TZ1 520 aa24.89■■□□□ 1.57
CTU2-202ENST00000453996 FANCBQ8NB91 859 aa24.89■■□□□ 1.57
CTU2-202ENST00000453996 TMEM87AQ8NBN3 555 aa24.89■■□□□ 1.57
CTU2-202ENST00000453996 DDAH1O94760 285 aa24.88■■□□□ 1.57
CTU2-202ENST00000453996 TSPY3P0CV98 308 aa24.88■■□□□ 1.57
CTU2-202ENST00000453996 TSPY8P0CW00 308 aa24.88■■□□□ 1.57
CTU2-202ENST00000453996 IFNAR1P17181 557 aa24.88■■□□□ 1.57
CTU2-202ENST00000453996 RASA1P20936 1047 aa24.88■■□□□ 1.57
CTU2-202ENST00000453996 PTGER2P43116 358 aa24.88■■□□□ 1.57
CTU2-202ENST00000453996 CDK8P49336 464 aa24.88■■□□□ 1.57
CTU2-202ENST00000453996 C8orf76Q96K31 380 aa24.88■■□□□ 1.57
CTU2-202ENST00000453996 RSBN1LQ6PCB5 846 aaPredicted RBP24.88■■□□□ 1.57
CTU2-202ENST00000453996 NIM1KQ8IY84 436 aa24.88■■□□□ 1.57
CTU2-202ENST00000453996 RGS22Q8NE09 1264 aa24.88■■□□□ 1.57
CTU2-202ENST00000453996 PHKBQ93100 1093 aa24.88■■□□□ 1.57
CTU2-202ENST00000453996 OSBPL5Q9H0X9 879 aaPredicted RBP24.88■■□□□ 1.57
CTU2-202ENST00000453996 GDPD2Q9HCC8 539 aa24.88■■□□□ 1.57
CTU2-202ENST00000453996 SSRP1Q08945 709 aaKnown RBP24.87■■□□□ 1.57
CTU2-202ENST00000453996 GSE1Q14687 1217 aa24.87■■□□□ 1.57
CTU2-202ENST00000453996 CSPP1Q1MSJ5 1256 aa24.87■■□□□ 1.57
CTU2-202ENST00000453996 TAOK3Q9H2K8 898 aa24.87■■□□□ 1.57
CTU2-202ENST00000453996 TCP11L1Q9NUJ3 509 aa24.87■■□□□ 1.57
CTU2-202ENST00000453996 FMNL1O95466 1100 aaPredicted RBP24.86■■□□□ 1.57
CTU2-202ENST00000453996 KRT85P78386 507 aa24.86■■□□□ 1.57
CTU2-202ENST00000453996 USP48Q86UV5 1035 aa24.86■■□□□ 1.57
CTU2-202ENST00000453996 ZNRF3Q9ULT6 936 aa24.86■■□□□ 1.57
CTU2-202ENST00000453996 PCDHAC2Q9Y5I4 1007 aa24.86■■□□□ 1.57
CTU2-202ENST00000453996 MYH6P13533 1939 aa24.85■■□□□ 1.57
CTU2-202ENST00000453996 PSMD14O00487 310 aa24.85■■□□□ 1.57
CTU2-202ENST00000453996 FIBPO43427 364 aa24.85■■□□□ 1.57
CTU2-202ENST00000453996 RAD17O75943 681 aa24.85■■□□□ 1.57
CTU2-202ENST00000453996 VIL1P09327 827 aaKnown RBP24.85■■□□□ 1.57
CTU2-202ENST00000453996 GUCY1B3Q02153 619 aa24.85■■□□□ 1.57
CTU2-202ENST00000453996 TROAPQ12815 778 aa24.85■■□□□ 1.57
CTU2-202ENST00000453996 DGKHQ86XP1 1220 aa24.85■■□□□ 1.57
CTU2-202ENST00000453996 IL17RBQ9NRM6 502 aa24.85■■□□□ 1.57
CTU2-202ENST00000453996 RBM28Q9NW13 759 aaKnown RBP24.85■■□□□ 1.57
CTU2-202ENST00000453996 RCSD1Q6JBY9 416 aa24.85■■□□□ 1.57
CTU2-202ENST00000453996 TRIM22Q8IYM9 498 aa24.85■■□□□ 1.57
CTU2-202ENST00000453996 FBXO18Q8NFZ0 1043 aa24.85■■□□□ 1.57
CTU2-202ENST00000453996 ALG1Q9BT22 464 aa24.85■■□□□ 1.57
CTU2-202ENST00000453996 SLC26A6Q9BXS9 759 aa24.85■■□□□ 1.57
CTU2-202ENST00000453996 ARFGEF1Q9Y6D6 1849 aa24.84■■□□□ 1.57
CTU2-202ENST00000453996 MBD3O95983 291 aa24.84■■□□□ 1.57
CTU2-202ENST00000453996 NFIAQ12857 509 aa24.84■■□□□ 1.57
CTU2-202ENST00000453996 FAM173BQ6P4H8 233 aa24.84■■□□□ 1.57
CTU2-202ENST00000453996 WASF1Q92558 559 aa24.84■■□□□ 1.57
CTU2-202ENST00000453996 ANKS1AQ92625 1134 aa24.84■■□□□ 1.57
CTU2-202ENST00000453996 IDI2Q9BXS1 227 aa24.84■■□□□ 1.57
CTU2-202ENST00000453996 GZF1Q9H116 711 aaPredicted RBP24.84■■□□□ 1.57
CTU2-202ENST00000453996 KAT14Q9H8E8 782 aa24.84■■□□□ 1.57
CTU2-202ENST00000453996 HLA-DOAP06340 250 aa24.83■■□□□ 1.57
CTU2-202ENST00000453996 GABPAQ06546 454 aa24.83■■□□□ 1.57
CTU2-202ENST00000453996 CFAP100Q494V2 611 aa24.83■■□□□ 1.57
CTU2-202ENST00000453996 CRACR2BQ8N4Y2 399 aaPredicted RBP24.82■■□□□ 1.56
CTU2-202ENST00000453996 NEDD1Q8NHV4 660 aa24.82■■□□□ 1.56
CTU2-202ENST00000453996 GPT2Q8TD30 523 aa24.82■■□□□ 1.56
CTU2-202ENST00000453996 SWAP70Q9UH65 585 aa24.82■■□□□ 1.56
CTU2-202ENST00000453996 BCS1LQ9Y276 419 aa24.82■■□□□ 1.56
CTU2-202ENST00000453996 NPM3O75607 178 aaKnown RBP24.82■■□□□ 1.56
CTU2-202ENST00000453996 NBPF11Q86T75 865 aa24.82■■□□□ 1.56
CTU2-202ENST00000453996 CTCFLQ8NI51 663 aaPredicted RBP24.82■■□□□ 1.56
CTU2-202ENST00000453996 GMLQ99445 158 aa24.82■■□□□ 1.56
CTU2-202ENST00000453996 SERPINB13Q9UIV8 391 aa24.82■■□□□ 1.56
CTU2-202ENST00000453996 HDAC9Q9UKV0 1011 aa24.82■■□□□ 1.56
CTU2-202ENST00000453996 SIPA1L1O43166 1804 aa24.82■■□□□ 1.56
CTU2-202ENST00000453996 NFKBIEO00221 500 aa24.81■■□□□ 1.56
CTU2-202ENST00000453996 OTUD7BQ6GQQ9 843 aa24.81■■□□□ 1.56
CTU2-202ENST00000453996 AIFM3Q96NN9 605 aa24.81■■□□□ 1.56
CTU2-202ENST00000453996 PLIN4Q96Q06 1357 aa24.8■■□□□ 1.56
CTU2-202ENST00000453996 CACNB3P54284 484 aa24.8■■□□□ 1.56
CTU2-202ENST00000453996 EHD4Q9H223 541 aa24.8■■□□□ 1.56
CTU2-202ENST00000453996 DHX36Q9H2U1 1008 aaKnown RBP24.8■■□□□ 1.56
CTU2-202ENST00000453996 DEXIO95424 95 aa24.8■■□□□ 1.56
CTU2-202ENST00000453996 TRIM29Q14134 588 aa24.8■■□□□ 1.56
CTU2-202ENST00000453996 CMTR1Q8N1G2 835 aaKnown RBP24.8■■□□□ 1.56
CTU2-202ENST00000453996 PNMA1Q8ND90 353 aa24.8■■□□□ 1.56
CTU2-202ENST00000453996 JDP2Q8WYK2 163 aa24.8■■□□□ 1.56
CTU2-202ENST00000453996 RNF26Q9BY78 433 aaPredicted RBP24.8■■□□□ 1.56
CTU2-202ENST00000453996 SCAND2PQ9GZW5 306 aaPredicted RBP24.8■■□□□ 1.56
CTU2-202ENST00000453996 FAM198AQ9UFP1 575 aa24.8■■□□□ 1.56
CTU2-202ENST00000453996 GADD45BO75293 160 aaPredicted RBP24.79■■□□□ 1.56
CTU2-202ENST00000453996 TMTC3Q6ZXV5 915 aa24.79■■□□□ 1.56
CTU2-202ENST00000453996 CCDC82Q8N4S0 544 aa24.79■■□□□ 1.56
CTU2-202ENST00000453996 OGFOD1Q8N543 542 aa24.79■■□□□ 1.56
CTU2-202ENST00000453996 AGBL3Q8NEM8 1001 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms