RNA–Protein interactions for RNA: ENST00000453260.6

TNFRSF25-207, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-207ENST00000453260 RHPN1Q8TCX5 695 aa22.39■■□□□ 1.17
TNFRSF25-207ENST00000453260 ASCC2Q9H1I8 757 aaPredicted RBP22.39■■□□□ 1.17
TNFRSF25-207ENST00000453260 DOCK3Q8IZD9 2030 aa22.39■■□□□ 1.17
TNFRSF25-207ENST00000453260 GJA8P48165 433 aa22.38■■□□□ 1.17
TNFRSF25-207ENST00000453260 MIGA1Q8NAN2 632 aa22.38■■□□□ 1.17
TNFRSF25-207ENST00000453260 LOC285556D6RIA3 1793 aa22.38■■□□□ 1.17
TNFRSF25-207ENST00000453260 MYH1P12882 1939 aa22.37■■□□□ 1.17
TNFRSF25-207ENST00000453260 USP17L10C9JJH3 530 aa22.37■■□□□ 1.17
TNFRSF25-207ENST00000453260 CAPN2P17655 700 aa22.37■■□□□ 1.17
TNFRSF25-207ENST00000453260 IRX3P78415 501 aaPredicted RBP22.37■■□□□ 1.17
TNFRSF25-207ENST00000453260 MTMR2Q13614 643 aa22.37■■□□□ 1.17
TNFRSF25-207ENST00000453260 KIF1BPQ96EK5 621 aa22.37■■□□□ 1.17
TNFRSF25-207ENST00000453260 IL1RAPL2Q9NP60 686 aa22.37■■□□□ 1.17
TNFRSF25-207ENST00000453260 SIPA1L1O43166 1804 aa22.36■■□□□ 1.17
TNFRSF25-207ENST00000453260 TTC6Q86TZ1 520 aa22.36■■□□□ 1.17
TNFRSF25-207ENST00000453260 ANTXR1Q9H6X2 564 aa22.36■■□□□ 1.17
TNFRSF25-207ENST00000453260 DNAJC18Q9H819 358 aa22.36■■□□□ 1.17
TNFRSF25-207ENST00000453260 TAOK2Q9UL54 1235 aa22.36■■□□□ 1.17
TNFRSF25-207ENST00000453260 NDUFB9Q9Y6M9 179 aa22.36■■□□□ 1.17
TNFRSF25-207ENST00000453260 GDF11O95390 407 aa22.35■■□□□ 1.17
TNFRSF25-207ENST00000453260 IFIT2P09913 472 aaKnown RBP22.35■■□□□ 1.17
TNFRSF25-207ENST00000453260 HOXA7P31268 230 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF25-207ENST00000453260 PCDH10Q9P2E7 1040 aa22.35■■□□□ 1.17
TNFRSF25-207ENST00000453260 ZBTB21Q9ULJ3 1066 aa22.35■■□□□ 1.17
TNFRSF25-207ENST00000453260 COG6Q9Y2V7 657 aa22.35■■□□□ 1.17
TNFRSF25-207ENST00000453260 APBB1O00213 710 aa22.34■■□□□ 1.17
TNFRSF25-207ENST00000453260 RAB11FIP3O75154 756 aa22.34■■□□□ 1.17
TNFRSF25-207ENST00000453260 ELNP15502 786 aa22.34■■□□□ 1.17
TNFRSF25-207ENST00000453260 SHISA4Q96DD7 197 aa22.34■■□□□ 1.17
TNFRSF25-207ENST00000453260 UNC93B1Q9H1C4 597 aa22.34■■□□□ 1.17
TNFRSF25-207ENST00000453260 ZBTB40Q9NUA8 1239 aa22.34■■□□□ 1.17
TNFRSF25-207ENST00000453260 SERPINB13Q9UIV8 391 aa22.34■■□□□ 1.17
TNFRSF25-207ENST00000453260 INHAP05111 366 aa22.33■■□□□ 1.17
TNFRSF25-207ENST00000453260 HABP4Q5JVS0 413 aaKnown RBP22.33■■□□□ 1.17
TNFRSF25-207ENST00000453260 U2AF1L4Q8WU68 220 aaKnown RBP22.33■■□□□ 1.17
TNFRSF25-207ENST00000453260 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.33■■□□□ 1.17
TNFRSF25-207ENST00000453260 DPF3Q92784 378 aa22.33■■□□□ 1.17
TNFRSF25-207ENST00000453260 HTATIP2Q9BUP3 242 aa22.33■■□□□ 1.17
TNFRSF25-207ENST00000453260 EHD4Q9H223 541 aa22.33■■□□□ 1.17
TNFRSF25-207ENST00000453260 MAGEB6P1A0A0J9YX57 407 aa22.32■■□□□ 1.16
TNFRSF25-207ENST00000453260 SGPL1O95470 568 aa22.32■■□□□ 1.16
TNFRSF25-207ENST00000453260 JAG1P78504 1218 aa22.32■■□□□ 1.16
TNFRSF25-207ENST00000453260 SLC9C2Q5TAH2 1124 aa22.32■■□□□ 1.16
TNFRSF25-207ENST00000453260 TATDN1Q6P1N9 297 aa22.32■■□□□ 1.16
TNFRSF25-207ENST00000453260 USP17L2Q6R6M4 530 aa22.32■■□□□ 1.16
TNFRSF25-207ENST00000453260 P2RX7Q99572 595 aaKnown RBP22.32■■□□□ 1.16
TNFRSF25-207ENST00000453260 MORF4L1Q9UBU8 362 aa22.32■■□□□ 1.16
TNFRSF25-207ENST00000453260 RCAN3Q9UKA8 241 aa22.32■■□□□ 1.16
TNFRSF25-207ENST00000453260 GH2P01242 217 aa22.31■■□□□ 1.16
TNFRSF25-207ENST00000453260 CERKLQ49MI3 558 aaPredicted RBP22.31■■□□□ 1.16
TNFRSF25-207ENST00000453260 GPRC5AQ8NFJ5 357 aa22.31■■□□□ 1.16
TNFRSF25-207ENST00000453260 GTF3C2Q8WUA4 911 aaPredicted RBP22.31■■□□□ 1.16
TNFRSF25-207ENST00000453260 CRNKL1Q9BZJ0 848 aaKnown RBP22.31■■□□□ 1.16
TNFRSF25-207ENST00000453260 BCL11AQ9H165 835 aa22.31■■□□□ 1.16
TNFRSF25-207ENST00000453260 CABP5Q9NP86 173 aa22.31■■□□□ 1.16
TNFRSF25-207ENST00000453260 TFRCP02786 760 aaKnown RBP22.3■■□□□ 1.16
TNFRSF25-207ENST00000453260 POLR3DP05423 398 aaPredicted RBP22.3■■□□□ 1.16
TNFRSF25-207ENST00000453260 HERVK_113P62684 666 aa22.3■■□□□ 1.16
TNFRSF25-207ENST00000453260 CCAR1Q8IX12 1150 aaKnown RBP22.3■■□□□ 1.16
TNFRSF25-207ENST00000453260 DNAJC2Q99543 621 aaKnown RBP22.3■■□□□ 1.16
TNFRSF25-207ENST00000453260 PDE6AP16499 860 aa22.29■■□□□ 1.16
TNFRSF25-207ENST00000453260 USP14P54578 494 aa22.29■■□□□ 1.16
TNFRSF25-207ENST00000453260 ABCB5Q2M3G0 1257 aa22.29■■□□□ 1.16
TNFRSF25-207ENST00000453260 SHROOM1Q2M3G4 852 aaPredicted RBP22.29■■□□□ 1.16
TNFRSF25-207ENST00000453260 FEZ1Q99689 392 aa22.29■■□□□ 1.16
TNFRSF25-207ENST00000453260 RIOK1Q9BRS2 568 aaKnown RBP22.29■■□□□ 1.16
TNFRSF25-207ENST00000453260 H0YGN5 161 aa22.28■■□□□ 1.16
TNFRSF25-207ENST00000453260 GOLIM4O00461 696 aa22.28■■□□□ 1.16
TNFRSF25-207ENST00000453260 FARP2O94887 1054 aaPredicted RBP22.28■■□□□ 1.16
TNFRSF25-207ENST00000453260 HMGCRP04035 888 aa22.28■■□□□ 1.16
TNFRSF25-207ENST00000453260 RAB3GAP1Q15042 981 aa22.28■■□□□ 1.16
TNFRSF25-207ENST00000453260 SIRT2Q8IXJ6 389 aa22.28■■□□□ 1.16
TNFRSF25-207ENST00000453260 DEFB118Q96PH6 123 aa22.28■■□□□ 1.16
TNFRSF25-207ENST00000453260 EMILIN3Q9NT22 766 aa22.28■■□□□ 1.16
TNFRSF25-207ENST00000453260 GJD2Q9UKL4 321 aa22.28■■□□□ 1.16
TNFRSF25-207ENST00000453260 UBE2Q1Q7Z7E8 422 aa22.27■■□□□ 1.16
TNFRSF25-207ENST00000453260 PAK6Q9NQU5 681 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF25-207ENST00000453260 ZNF532Q9HCE3 1301 aa22.27■■□□□ 1.16
TNFRSF25-207ENST00000453260 MAPK4P31152 587 aa22.26■■□□□ 1.15
TNFRSF25-207ENST00000453260 PLCD1P51178 756 aa22.26■■□□□ 1.15
TNFRSF25-207ENST00000453260 PDE3AQ14432 1141 aa22.26■■□□□ 1.15
TNFRSF25-207ENST00000453260 NUDT12Q9BQG2 462 aa22.26■■□□□ 1.15
TNFRSF25-207ENST00000453260 MCM9Q9NXL9 1143 aa22.26■■□□□ 1.15
TNFRSF25-207ENST00000453260 NR2E3Q9Y5X4 410 aa22.26■■□□□ 1.15
TNFRSF25-207ENST00000453260 USP17L15C9J2P7 530 aa22.25■■□□□ 1.15
TNFRSF25-207ENST00000453260 USP17L13C9JLJ4 530 aa22.25■■□□□ 1.15
TNFRSF25-207ENST00000453260 USP17L11C9JVI0 530 aa22.25■■□□□ 1.15
TNFRSF25-207ENST00000453260 USP17L18D6R9N7 530 aa22.25■■□□□ 1.15
TNFRSF25-207ENST00000453260 USP17L22D6RA61 530 aa22.25■■□□□ 1.15
TNFRSF25-207ENST00000453260 USP17L17D6RBQ6 530 aa22.25■■□□□ 1.15
TNFRSF25-207ENST00000453260 USP17L19D6RCP7 530 aa22.25■■□□□ 1.15
TNFRSF25-207ENST00000453260 USP17L20D6RJB6 530 aa22.25■■□□□ 1.15
TNFRSF25-207ENST00000453260 ERVK-9P63128 1117 aa22.25■■□□□ 1.15
TNFRSF25-207ENST00000453260 ERVK-24P63145 666 aa22.25■■□□□ 1.15
TNFRSF25-207ENST00000453260 USP17L24Q0WX57 530 aa22.25■■□□□ 1.15
TNFRSF25-207ENST00000453260 SOCS4Q8WXH5 440 aa22.25■■□□□ 1.15
TNFRSF25-207ENST00000453260 C12orf42Q96LP6 360 aa22.25■■□□□ 1.15
TNFRSF25-207ENST00000453260 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.25■■□□□ 1.15
TNFRSF25-207ENST00000453260 KIAA1683Q9H0B3 1180 aa22.25■■□□□ 1.15
TNFRSF25-207ENST00000453260 TXNRD2Q9NNW7 524 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms