RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 RBM10P98175 930 aaKnown RBP5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 MORC3Q14149 939 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 GRIK4Q16099 956 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 C21orf62-AS1Q17RA5 79 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 SLC4A8Q2Y0W8 1093 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 ALFQ53S48 1182 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 C2orf27AQ580R0 203 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 LCE3BQ5TA77 95 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 CC2D1AQ6P1N0 951 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 ILDR2Q71H61 639 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 NCAPG2Q86XI2 1143 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 CPXCR1Q8N123 301 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 DTWD1Q8N5C7 304 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 SNX29Q8TEQ0 813 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 CHRDQ9H2X0 955 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 GINM1Q9NU53 330 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 KBTBD4Q9NVX7 518 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 MSRB2Q9Y3D2 182 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 DAAM1Q9Y4D1 1078 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 CD2APQ9Y5K6 639 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 GOLGA6CA6NDK9 693 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 GOLGA6BA6NDN3 693 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 PDPK1O15530 556 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 SMNDC1O75940 238 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 GOLGA6DP0CG33 693 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 MYCLP1P12525 358 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 CES1P23141 567 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 POLD1P28340 1107 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 SOX5P35711 763 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 ST13P50502 369 aaKnown RBP5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 GUCY2FP51841 1108 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 TERF1P54274 439 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 ANO1Q5XXA6 986 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 WWC2Q6AWC2 1192 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 SPICE1Q8N0Z3 855 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 C1orf127Q8N9H9 656 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 ATL2Q8NHH9 583 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 SRRTQ9BXP5 876 aaKnown RBP5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 RASSF4Q9H2L5 321 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 CAAP1Q9H8G2 361 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 ST7Q9NRC1 585 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 GOLGA6AQ9NYA3 693 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 NOL7Q9UMY1 257 aaKnown RBP5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 CTDP1Q9Y5B0 961 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 PPP2R3BQ9Y5P8 575 aa5.47□□□□□ -1.53
HMGB3P21-201ENST00000452483 EIF1AYO14602 144 aaKnown RBP5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 SMAD7O15105 426 aaKnown RBP5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 DHX16O60231 1041 aaKnown RBP5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 PHACTR2O75167 634 aa5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 TNFRSF21O75509 655 aa5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 RNASEH2AO75792 299 aaKnown RBP5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 TRIM37O94972 964 aa5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 NBPF7P0C2Y1 421 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 POU3F3P20264 500 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 STAT3P40763 770 aa5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 BAG6P46379 1132 aa5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 ORC1Q13415 861 aa5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 RASGRF1Q13972 1273 aa5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 SIM2Q14190 667 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 CCDC184Q52MB2 194 aa5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 TNNI3KQ59H18 835 aa5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 CEP135Q66GS9 1140 aa5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 SYNPOQ8N3V7 929 aa5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 IL22RA1Q8N6P7 574 aa5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 ANKRD42Q8N9B4 389 aa5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 THAP3Q8WTV1 239 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 ZNF69Q9UC07 566 aa5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 FOXD3Q9UJU5 478 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 NOB1Q9ULX3 412 aaKnown RBP5.46□□□□□ -1.54
HMGB3P21-201ENST00000452483 GIPC1O14908 333 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 AKAP10O43572 662 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 DEAF1O75398 565 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 TCEA3O75764 348 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 ACPPP15309 386 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 SELPP16109 830 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 SOX9P48436 509 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 NEK2P51955 445 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 MLC1Q15049 377 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 DDR2Q16832 855 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 MTERF2Q49AM1 385 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 CASC1Q6TDU7 716 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 SHISA2Q6UWI4 295 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 FBXO11Q86XK2 927 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 THNSL2Q86YJ6 484 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 CELF2-AS1Q8N7Q2 184 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 CEP120Q8N960 986 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 NGDNQ8NEJ9 315 aaKnown RBP5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 MFSD3Q96ES6 412 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 SMAD5Q99717 465 aaKnown RBP5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 PBX4Q9BYU1 374 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 LACRTQ9GZZ8 138 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 IFT122Q9HBG6 1241 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 AASDHPPTQ9NRN7 309 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 ATG3Q9NT62 314 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 ADAMTS1Q9UHI8 967 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 SALL4Q9UJQ4 1053 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 FBXO2Q9UK22 296 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 NAP1L2Q9ULW6 460 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 GTF2A1LQ9UNN4 478 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms