RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 TRDNQ13061 729 aa12.51□□□□□ -0.41
PKP4-206ENST00000452162 TPRNQ4KMQ1 711 aa12.51□□□□□ -0.41
PKP4-206ENST00000452162 IFNL3Q8IZI9 196 aa12.51□□□□□ -0.41
PKP4-206ENST00000452162 ZNF384Q8TF68 577 aa12.51□□□□□ -0.41
PKP4-206ENST00000452162 TEKT1Q969V4 418 aa12.51□□□□□ -0.41
PKP4-206ENST00000452162 NEDD4P46934 1319 aa12.51□□□□□ -0.41
PKP4-206ENST00000452162 TRAF5O00463 557 aa12.5□□□□□ -0.41
PKP4-206ENST00000452162 SH2B2O14492 632 aaPredicted RBP12.5□□□□□ -0.41
PKP4-206ENST00000452162 ADD1P35611 737 aaKnown RBP12.5□□□□□ -0.41
PKP4-206ENST00000452162 HDLBPQ00341 1268 aaKnown RBP12.5□□□□□ -0.41
PKP4-206ENST00000452162 LCORLQ8N3X6 602 aa12.5□□□□□ -0.41
PKP4-206ENST00000452162 DCPSQ96C86 337 aaKnown RBP12.5□□□□□ -0.41
PKP4-206ENST00000452162 FUCA2Q9BTY2 467 aa12.5□□□□□ -0.41
PKP4-206ENST00000452162 TRPM7Q96QT4 1865 aa12.5□□□□□ -0.41
PKP4-206ENST00000452162 CLRN2A0PK11 232 aa12.5□□□□□ -0.41
PKP4-206ENST00000452162 ADM5C9JUS6 153 aa12.5□□□□□ -0.41
PKP4-206ENST00000452162 GNAT2P19087 354 aa12.5□□□□□ -0.41
PKP4-206ENST00000452162 MECOMQ03112 1051 aa12.5□□□□□ -0.41
PKP4-206ENST00000452162 SPTY2D1Q68D10 685 aaPredicted RBP12.5□□□□□ -0.41
PKP4-206ENST00000452162 HHIPL2Q6UWX4 724 aa12.5□□□□□ -0.41
PKP4-206ENST00000452162 KRT26Q7Z3Y9 468 aa12.5□□□□□ -0.41
PKP4-206ENST00000452162 DZIP1Q86YF9 867 aaKnown RBP12.5□□□□□ -0.41
PKP4-206ENST00000452162 RNF214Q8ND24 703 aa12.5□□□□□ -0.41
PKP4-206ENST00000452162 MRIQ9BWK5 157 aa12.5□□□□□ -0.41
PKP4-206ENST00000452162 RAI14Q9P0K7 980 aa12.5□□□□□ -0.41
PKP4-206ENST00000452162 LRP2BPQ9P2M1 347 aa12.5□□□□□ -0.41
PKP4-206ENST00000452162 ANGEL1Q9UNK9 670 aaKnown RBP12.5□□□□□ -0.41
PKP4-206ENST00000452162 DAGLAQ9Y4D2 1042 aa12.5□□□□□ -0.41
PKP4-206ENST00000452162 PASKQ96RG2 1323 aa12.5□□□□□ -0.41
PKP4-206ENST00000452162 B4E1Z4 1266 aa12.49□□□□□ -0.41
PKP4-206ENST00000452162 DHX16O60231 1041 aaKnown RBP12.49□□□□□ -0.41
PKP4-206ENST00000452162 LIG1P18858 919 aa12.49□□□□□ -0.41
PKP4-206ENST00000452162 FOSBP53539 338 aa12.49□□□□□ -0.41
PKP4-206ENST00000452162 APOBEC3HQ6NTF7 200 aaKnown RBP12.49□□□□□ -0.41
PKP4-206ENST00000452162 NSUN4Q96CB9 384 aaKnown RBP12.49□□□□□ -0.41
PKP4-206ENST00000452162 ZDHHC15Q96MV8 337 aa12.49□□□□□ -0.41
PKP4-206ENST00000452162 NAPBQ9H115 298 aa12.49□□□□□ -0.41
PKP4-206ENST00000452162 TDRD3Q9H7E2 651 aaKnown RBP12.49□□□□□ -0.41
PKP4-206ENST00000452162 TACC3Q9Y6A5 838 aa12.49□□□□□ -0.41
PKP4-206ENST00000452162 PRKAB2O43741 272 aa12.49□□□□□ -0.41
PKP4-206ENST00000452162 TRIM44Q96DX7 344 aaPredicted RBP12.49□□□□□ -0.41
PKP4-206ENST00000452162 PGBD1Q96JS3 809 aa12.49□□□□□ -0.41
PKP4-206ENST00000452162 TMEM87BQ96K49 555 aa12.49□□□□□ -0.41
PKP4-206ENST00000452162 MAST2Q6P0Q8 1798 aa12.48□□□□□ -0.41
PKP4-206ENST00000452162 PPFIA3O75145 1194 aa12.48□□□□□ -0.41
PKP4-206ENST00000452162 CFAP45Q9UL16 551 aa12.48□□□□□ -0.41
PKP4-206ENST00000452162 PITPNM2Q9BZ72 1349 aa12.48□□□□□ -0.41
PKP4-206ENST00000452162 MYO1BO43795 1136 aa12.48□□□□□ -0.41
PKP4-206ENST00000452162 CTDSPL2Q05D32 466 aa12.48□□□□□ -0.41
PKP4-206ENST00000452162 SPDYE2Q495Y8 402 aa12.48□□□□□ -0.41
PKP4-206ENST00000452162 GIMAP6Q6P9H5 292 aa12.48□□□□□ -0.41
PKP4-206ENST00000452162 ADGRA1Q86SQ6 560 aa12.48□□□□□ -0.41
PKP4-206ENST00000452162 SULF1Q8IWU6 871 aa12.48□□□□□ -0.41
PKP4-206ENST00000452162 IGDCC4Q8TDY8 1250 aa12.48□□□□□ -0.41
PKP4-206ENST00000452162 VEZTQ9HBM0 779 aa12.48□□□□□ -0.41
PKP4-206ENST00000452162 ZNF70Q9UC06 446 aaPredicted RBP12.48□□□□□ -0.41
PKP4-206ENST00000452162 SLC4A4Q9Y6R1 1079 aa12.48□□□□□ -0.41
PKP4-206ENST00000452162 CYP7A1P22680 504 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 CACNB3P54284 484 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 AKNAD1Q5T1N1 836 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 PRAMEF18Q5VWM3 479 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 ATL3Q6DD88 541 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 RAB11FIP4Q86YS3 637 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 MIGA1Q8NAN2 632 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 STAG1Q8WVM7 1258 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 NACAP1Q9BZK3 213 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 LY9Q9HBG7 655 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 SENP2Q9HC62 589 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 INCENPQ9NQS7 918 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 RCOR1Q9UKL0 485 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 GAKO14976 1311 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 ESPNB1AK53 854 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 GUCY1B3Q02153 619 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 UVSSAQ2YD98 709 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 APOA5Q6Q788 366 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 SGMS1Q86VZ5 419 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 PKNOX2Q96KN3 472 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 CNNM2Q9H8M5 875 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 ORC3Q9UBD5 711 aaPredicted RBP12.47□□□□□ -0.41
PKP4-206ENST00000452162 MROH7-TTC4A0A0A0MT08 1334 aa12.47□□□□□ -0.41
PKP4-206ENST00000452162 PCNTO95613 3336 aa12.46□□□□□ -0.41
PKP4-206ENST00000452162 GOLGA6L4A6NEF3 574 aa12.46□□□□□ -0.41
PKP4-206ENST00000452162 HSPA6P17066 643 aa12.46□□□□□ -0.41
PKP4-206ENST00000452162 TDO2P48775 406 aa12.46□□□□□ -0.41
PKP4-206ENST00000452162 HTRA3P83110 453 aa12.46□□□□□ -0.41
PKP4-206ENST00000452162 CDC42EP5Q6NZY7 148 aa12.46□□□□□ -0.41
PKP4-206ENST00000452162 APOBEC3FQ8IUX4 373 aaKnown RBP12.46□□□□□ -0.41
PKP4-206ENST00000452162 RGS22Q8NE09 1264 aa12.46□□□□□ -0.41
PKP4-206ENST00000452162 FAM163AQ96GL9 167 aaPredicted RBP12.46□□□□□ -0.41
PKP4-206ENST00000452162 NUP62CLQ9H1M0 184 aa12.46□□□□□ -0.41
PKP4-206ENST00000452162 NID2Q14112 1375 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 TCP10L2B9ZVM9 353 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 CPLX1O14810 134 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 LIFRP42702 1097 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 METAP2P50579 478 aaKnown RBP eCLIP12.45□□□□□ -0.429e-10■■□□□ 11.4
PKP4-206ENST00000452162 APLP1P51693 650 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 SLF2Q8IX21 1173 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 FBXO18Q8NFZ0 1043 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 C8orf76Q96K31 380 aa12.45□□□□□ -0.42
PKP4-206ENST00000452162 ZNF396Q96N95 335 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms